RNA–Protein interactions for RNA: ENST00000539548.6

CDH13-204, Transcript of cadherin 13, humanhuman

TSL 2

Gene CDH13, Length 2,199 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-204ENST00000539548 OR2W1Q9Y3N9 320 aa8.25□□□□□ -1.09
CDH13-204ENST00000539548 CLDN34H7C241 214 aa8.25□□□□□ -1.09
CDH13-204ENST00000539548 SLC33A1O00400 549 aaPredicted RBP8.25□□□□□ -1.09
CDH13-204ENST00000539548 PPP1R2P9O14990 202 aa8.25□□□□□ -1.09
CDH13-204ENST00000539548 TNFSF12O43508 249 aa8.25□□□□□ -1.09
CDH13-204ENST00000539548 BCL2P10415 239 aa8.25□□□□□ -1.09
CDH13-204ENST00000539548 COX5BP10606 129 aa8.25□□□□□ -1.09
CDH13-204ENST00000539548 FOLR3P41439 243 aa8.25□□□□□ -1.09
CDH13-204ENST00000539548 RAB11AP62491 216 aa8.25□□□□□ -1.09
CDH13-204ENST00000539548 NKX6-1P78426 367 aaPredicted RBP8.25□□□□□ -1.09
CDH13-204ENST00000539548 ARF1P84077 181 aaKnown RBP8.25□□□□□ -1.09
CDH13-204ENST00000539548 OR10D4PQ8NGN7 298 aa8.25□□□□□ -1.09
CDH13-204ENST00000539548 ABHD5Q8WTS1 349 aa8.25□□□□□ -1.09
CDH13-204ENST00000539548 LSM10Q969L4 123 aaKnown RBP8.25□□□□□ -1.09
CDH13-204ENST00000539548 P2RX4Q99571 388 aa8.25□□□□□ -1.09
CDH13-204ENST00000539548 PLK3Q9H4B4 646 aa8.25□□□□□ -1.09
CDH13-204ENST00000539548 GNG13Q9P2W3 67 aa8.25□□□□□ -1.09
CDH13-204ENST00000539548 IL36RNQ9UBH0 155 aa8.25□□□□□ -1.09
CDH13-204ENST00000539548 IGKV3D-15A0A087WSY6 115 aa8.24□□□□□ -1.09
CDH13-204ENST00000539548 LRP5LA4QPB2 252 aa8.24□□□□□ -1.09
CDH13-204ENST00000539548 ATXN7O15265 892 aaPredicted RBP8.24□□□□□ -1.09
CDH13-204ENST00000539548 TRAPPC6AO75865 159 aa8.24□□□□□ -1.09
CDH13-204ENST00000539548 CNOT4O95628 575 aaKnown RBP8.24□□□□□ -1.09
CDH13-204ENST00000539548 PTBP3O95758 552 aaKnown RBP8.24□□□□□ -1.09
CDH13-204ENST00000539548 CYB5R3P00387 301 aaPredicted RBP8.24□□□□□ -1.09
CDH13-204ENST00000539548 IGHEP01854 428 aa8.24□□□□□ -1.09
CDH13-204ENST00000539548 SERPINE2P07093 398 aa8.24□□□□□ -1.09
CDH13-204ENST00000539548 SOD3P08294 240 aa8.24□□□□□ -1.09
CDH13-204ENST00000539548 TRGC1P0CF51 173 aa8.24□□□□□ -1.09
CDH13-204ENST00000539548 CCL4P13236 92 aa8.24□□□□□ -1.09
CDH13-204ENST00000539548 HIST1H1BP16401 226 aaKnown RBP8.24□□□□□ -1.09
CDH13-204ENST00000539548 TRA2AQ13595 282 aaKnown RBP eCLIP8.24□□□□□ -1.09
CDH13-204ENST00000539548 SLC25A24Q6NUK1 477 aa8.24□□□□□ -1.09
CDH13-204ENST00000539548 C20orf204Q6ZNR8 217 aa8.24□□□□□ -1.09
CDH13-204ENST00000539548 MRPL21Q7Z2W9 205 aaKnown RBP8.24□□□□□ -1.09
CDH13-204ENST00000539548 C1orf87Q8N0U7 546 aa8.24□□□□□ -1.09
CDH13-204ENST00000539548 OR10J5Q8NHC4 309 aa8.24□□□□□ -1.09
CDH13-204ENST00000539548 ABHD3Q8WU67 409 aa8.24□□□□□ -1.09
CDH13-204ENST00000539548 RCC1LQ96I51 464 aaKnown RBP8.24□□□□□ -1.09
CDH13-204ENST00000539548 ZNF845Q96IR2 970 aaPredicted RBP8.24□□□□□ -1.09
CDH13-204ENST00000539548 SDF2L1Q9HCN8 221 aa8.24□□□□□ -1.09
CDH13-204ENST00000539548 TRBV24-1A0A075B6N3 115 aa8.24□□□□□ -1.09
CDH13-204ENST00000539548 HSPB6O14558 160 aa8.24□□□□□ -1.09
CDH13-204ENST00000539548 SYNGR2O43760 224 aa8.24□□□□□ -1.09
CDH13-204ENST00000539548 SS18L1O75177 396 aaPredicted RBP8.24□□□□□ -1.09
CDH13-204ENST00000539548 MRPL33O75394 65 aaKnown RBP8.24□□□□□ -1.09
CDH13-204ENST00000539548 PSG2P11465 335 aa8.24□□□□□ -1.09
CDH13-204ENST00000539548 GFRA1P56159 465 aa8.24□□□□□ -1.09
CDH13-204ENST00000539548 SERF2P84101 59 aa8.24□□□□□ -1.09
CDH13-204ENST00000539548 ZFP36L1Q07352 338 aaKnown RBP8.24□□□□□ -1.09
CDH13-204ENST00000539548 TMEM267Q0VDI3 215 aaPredicted RBP8.24□□□□□ -1.09
CDH13-204ENST00000539548 PMS2P11Q13670 270 aa8.24□□□□□ -1.09
CDH13-204ENST00000539548 ZNF726P1Q15940 193 aa8.24□□□□□ -1.09
CDH13-204ENST00000539548 LRRC75BQ2VPJ9 315 aa8.24□□□□□ -1.09
CDH13-204ENST00000539548 C9orf152Q5JTZ5 239 aa8.24□□□□□ -1.09
CDH13-204ENST00000539548 ZNF787Q6DD87 383 aa8.24□□□□□ -1.09
CDH13-204ENST00000539548 OR2T2Q6IF00 324 aa8.24□□□□□ -1.09
CDH13-204ENST00000539548 SLC23A3Q6PIS1 610 aa8.24□□□□□ -1.09
CDH13-204ENST00000539548 Q6ZRM9 215 aa8.24□□□□□ -1.09
CDH13-204ENST00000539548 ZNF525Q8N782 197 aa8.24□□□□□ -1.09
CDH13-204ENST00000539548 CA5BP1Q8WTZ4 195 aa8.24□□□□□ -1.09
CDH13-204ENST00000539548 FRZBQ92765 325 aa8.24□□□□□ -1.09
CDH13-204ENST00000539548 APOBEC3DQ96AK3 386 aaPredicted RBP8.24□□□□□ -1.09
CDH13-204ENST00000539548 HIST1H2AAQ96QV6 131 aa8.24□□□□□ -1.09
CDH13-204ENST00000539548 CABLES2Q9BTV7 478 aa8.24□□□□□ -1.09
CDH13-204ENST00000539548 GPR61Q9BZJ8 451 aa8.24□□□□□ -1.09
CDH13-204ENST00000539548 UBE2ZQ9H832 354 aaPredicted RBP8.24□□□□□ -1.09
CDH13-204ENST00000539548 FSCN3Q9NQT6 498 aa8.24□□□□□ -1.09
CDH13-204ENST00000539548 ERRFI1Q9UJM3 462 aaPredicted RBP8.24□□□□□ -1.09
CDH13-204ENST00000539548 NOSIPQ9Y314 301 aaKnown RBP8.24□□□□□ -1.09
CDH13-204ENST00000539548 CNTRLQ7Z7A1 2325 aa8.23□□□□□ -1.09
CDH13-204ENST00000539548 NPIPB11E5RHQ5 1161 aa8.23□□□□□ -1.09
CDH13-204ENST00000539548 H3BP45 60 aa8.23□□□□□ -1.09
CDH13-204ENST00000539548 NTN3O00634 580 aaPredicted RBP8.23□□□□□ -1.09
CDH13-204ENST00000539548 PHOX2AO14813 284 aa8.23□□□□□ -1.09
CDH13-204ENST00000539548 SYNGR1O43759 233 aa8.23□□□□□ -1.09
CDH13-204ENST00000539548 IGHV3-9P01782 118 aa8.23□□□□□ -1.09
CDH13-204ENST00000539548 HLA-HP01893 362 aa8.23□□□□□ -1.09
CDH13-204ENST00000539548 CCNOP22674 350 aa8.23□□□□□ -1.09
CDH13-204ENST00000539548 Q0VFX4 171 aa8.23□□□□□ -1.09
CDH13-204ENST00000539548 GFI1BQ5VTD9 330 aa8.23□□□□□ -1.09
CDH13-204ENST00000539548 ZNF600Q6ZNG1 722 aa8.23□□□□□ -1.09
CDH13-204ENST00000539548 PSMF1Q92530 271 aa8.23□□□□□ -1.09
CDH13-204ENST00000539548 RSG1Q9BU20 258 aa8.23□□□□□ -1.09
CDH13-204ENST00000539548 PARD6GQ9BYG4 376 aaPredicted RBP8.23□□□□□ -1.09
CDH13-204ENST00000539548 PRRG4Q9BZD6 226 aa8.23□□□□□ -1.09
CDH13-204ENST00000539548 CTDSP1Q9GZU7 261 aa8.23□□□□□ -1.09
CDH13-204ENST00000539548 PRDM13Q9H4Q3 707 aa8.23□□□□□ -1.09
CDH13-204ENST00000539548 ZNF665Q9H7R5 613 aa8.23□□□□□ -1.09
CDH13-204ENST00000539548 DEPPQ9NTK1 212 aa8.23□□□□□ -1.09
CDH13-204ENST00000539548 TRAV24A0A0B4J272 114 aa8.22□□□□□ -1.09
CDH13-204ENST00000539548 C5orf49A4QMS7 147 aa8.22□□□□□ -1.09
CDH13-204ENST00000539548 OR5H1A6NKK0 313 aa8.22□□□□□ -1.09
CDH13-204ENST00000539548 ZFP92A6NM28 416 aa8.22□□□□□ -1.09
CDH13-204ENST00000539548 CD300LBA8K4G0 201 aa8.22□□□□□ -1.09
CDH13-204ENST00000539548 IGKV1-39P01597 117 aa8.22□□□□□ -1.09
CDH13-204ENST00000539548 OPN1MWP04001 364 aa8.22□□□□□ -1.09
CDH13-204ENST00000539548 IGKV1D-39P04432 117 aa8.22□□□□□ -1.09
CDH13-204ENST00000539548 OPN1MW2P0DN77 364 aa8.22□□□□□ -1.09
CDH13-204ENST00000539548 OPN1MW3P0DN78 364 aa8.22□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 71.7 ms