RNA–Protein interactions for RNA: ENST00000539047.1

VAMP1-207, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 4

Gene VAMP1, Length 565 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-207ENST00000539047 PATZ1Q9HBE1 687 aaKnown RBP12.8□□□□□ -0.36
VAMP1-207ENST00000539047 CTSZQ9UBR2 303 aa12.8□□□□□ -0.36
VAMP1-207ENST00000539047 DUX4Q9UBX2 424 aa12.8□□□□□ -0.36
VAMP1-207ENST00000539047 CREBBPQ92793 2442 aa12.79□□□□□ -0.36
VAMP1-207ENST00000539047 TRAV39A0A0B4J263 110 aa12.79□□□□□ -0.36
VAMP1-207ENST00000539047 C12orf77C9JDV5 145 aa12.79□□□□□ -0.36
VAMP1-207ENST00000539047 RLN1P04808 185 aa12.79□□□□□ -0.36
VAMP1-207ENST00000539047 H2AFB2P0C5Z0 115 aa12.79□□□□□ -0.36
VAMP1-207ENST00000539047 PGAM2P15259 253 aa12.79□□□□□ -0.36
VAMP1-207ENST00000539047 FCGR2CP31995 323 aa12.79□□□□□ -0.36
VAMP1-207ENST00000539047 IGSF11Q5DX21 431 aa12.79□□□□□ -0.36
VAMP1-207ENST00000539047 ZDHHC22Q8N966 263 aa12.79□□□□□ -0.36
VAMP1-207ENST00000539047 LIME1Q9H400 295 aa12.79□□□□□ -0.36
VAMP1-207ENST00000539047 NARFLQ9H6Q4 476 aa12.79□□□□□ -0.36
VAMP1-207ENST00000539047 TAS2R3Q9NYW6 316 aa12.79□□□□□ -0.36
VAMP1-207ENST00000539047 CALYQ9NYX4 217 aa12.79□□□□□ -0.36
VAMP1-207ENST00000539047 SLC23A1Q9UHI7 598 aa12.79□□□□□ -0.36
VAMP1-207ENST00000539047 C14orf166Q9Y224 244 aaKnown RBP12.79□□□□□ -0.36
VAMP1-207ENST00000539047 TRAV6A0A075B6T7 132 aa12.78□□□□□ -0.36
VAMP1-207ENST00000539047 NPIPB11E5RHQ5 1161 aa12.78□□□□□ -0.36
VAMP1-207ENST00000539047 INMT-MINDY4F8WBC2 141 aa12.78□□□□□ -0.36
VAMP1-207ENST00000539047 RGS11O94810 467 aa12.78□□□□□ -0.36
VAMP1-207ENST00000539047 HBZP02008 142 aa12.78□□□□□ -0.36
VAMP1-207ENST00000539047 ZNF735P0CB33 412 aa12.78□□□□□ -0.36
VAMP1-207ENST00000539047 SPNP16150 400 aa12.78□□□□□ -0.36
VAMP1-207ENST00000539047 FPR2P25090 351 aa12.78□□□□□ -0.36
VAMP1-207ENST00000539047 S100GP29377 79 aa12.78□□□□□ -0.36
VAMP1-207ENST00000539047 SURF2Q15527 256 aaPredicted RBP12.78□□□□□ -0.36
VAMP1-207ENST00000539047 C11orf91Q3C1V1 193 aa12.78□□□□□ -0.36
VAMP1-207ENST00000539047 CD276Q5ZPR3 534 aa12.78□□□□□ -0.36
VAMP1-207ENST00000539047 LPCAT3Q6P1A2 487 aa12.78□□□□□ -0.36
VAMP1-207ENST00000539047 Q6ZPA2 131 aa12.78□□□□□ -0.36
VAMP1-207ENST00000539047 DACT3Q96B18 629 aaPredicted RBP12.78□□□□□ -0.36
VAMP1-207ENST00000539047 ZNF714Q96N38 554 aa12.78□□□□□ -0.36
VAMP1-207ENST00000539047 SSBP3Q9BWW4 388 aaPredicted RBP12.78□□□□□ -0.36
VAMP1-207ENST00000539047 BPESC1Q9GZL8 116 aa12.78□□□□□ -0.36
VAMP1-207ENST00000539047 MMP28Q9H239 520 aa12.78□□□□□ -0.36
VAMP1-207ENST00000539047 RBM7Q9Y580 266 aaKnown RBP12.78□□□□□ -0.36
VAMP1-207ENST00000539047 TRBV6-7A0A0A0MS04 114 aa12.77□□□□□ -0.37
VAMP1-207ENST00000539047 hCG_1809904A0A1W2PP81 198 aa12.77□□□□□ -0.37
VAMP1-207ENST00000539047 A0A1W2PPE2 198 aa12.77□□□□□ -0.37
VAMP1-207ENST00000539047 A0A1W2PR64 198 aa12.77□□□□□ -0.37
VAMP1-207ENST00000539047 A0A1W2PRV1 198 aa12.77□□□□□ -0.37
VAMP1-207ENST00000539047 VGLL3A8MV65 326 aa12.77□□□□□ -0.37
VAMP1-207ENST00000539047 ARPC1BO15143 372 aaKnown RBP12.77□□□□□ -0.37
VAMP1-207ENST00000539047 PRAF2O60831 178 aa12.77□□□□□ -0.37
VAMP1-207ENST00000539047 PEX14O75381 377 aa12.77□□□□□ -0.37
VAMP1-207ENST00000539047 SSTR5P35346 364 aa12.77□□□□□ -0.37
VAMP1-207ENST00000539047 RAG2P55895 527 aa12.77□□□□□ -0.37
VAMP1-207ENST00000539047 TAS2R31P59538 309 aa12.77□□□□□ -0.37
VAMP1-207ENST00000539047 FXYD4P59646 89 aa12.77□□□□□ -0.37
VAMP1-207ENST00000539047 HTD2P86397 168 aa12.77□□□□□ -0.37
VAMP1-207ENST00000539047 CR1LQ2VPA4 569 aa12.77□□□□□ -0.37
VAMP1-207ENST00000539047 C11orf88Q6PI97 169 aa12.77□□□□□ -0.37
VAMP1-207ENST00000539047 OR1L1Q8NH94 360 aa12.77□□□□□ -0.37
VAMP1-207ENST00000539047 ZFAND1Q8TCF1 268 aa12.77□□□□□ -0.37
VAMP1-207ENST00000539047 GIMAP1Q8WWP7 306 aa12.77□□□□□ -0.37
VAMP1-207ENST00000539047 NRGNQ92686 78 aa12.77□□□□□ -0.37
VAMP1-207ENST00000539047 CORO2AQ92828 525 aa12.77□□□□□ -0.37
VAMP1-207ENST00000539047 GNG12Q9UBI6 72 aa12.77□□□□□ -0.37
VAMP1-207ENST00000539047 JPT1Q9UK76 154 aa12.77□□□□□ -0.37
VAMP1-207ENST00000539047 ABCA12Q86UK0 2595 aa12.77□□□□□ -0.37
VAMP1-207ENST00000539047 TACC2O95359 2948 aa12.76□□□□□ -0.37
VAMP1-207ENST00000539047 KBTBD11-OT1A0A1B0GTJ5 212 aa12.76□□□□□ -0.37
VAMP1-207ENST00000539047 F5H0A9 414 aaPredicted RBP12.76□□□□□ -0.37
VAMP1-207ENST00000539047 PPYP01298 95 aa12.76□□□□□ -0.37
VAMP1-207ENST00000539047 WNT2P09544 360 aa12.76□□□□□ -0.37
VAMP1-207ENST00000539047 ZNF728P0DKX0 622 aa12.76□□□□□ -0.37
VAMP1-207ENST00000539047 NFYAP23511 347 aaPredicted RBP12.76□□□□□ -0.37
VAMP1-207ENST00000539047 HERPUD1Q15011 391 aa12.76□□□□□ -0.37
VAMP1-207ENST00000539047 ABCA11PQ4W5N1 156 aa12.76□□□□□ -0.37
VAMP1-207ENST00000539047 WDR25Q64LD2 544 aaPredicted RBP12.76□□□□□ -0.37
VAMP1-207ENST00000539047 DHRS11Q6UWP2 260 aa12.76□□□□□ -0.37
VAMP1-207ENST00000539047 Q6ZNX1 250 aa12.76□□□□□ -0.37
VAMP1-207ENST00000539047 TMED4Q7Z7H5 227 aa12.76□□□□□ -0.37
VAMP1-207ENST00000539047 GLCCI1Q86VQ1 547 aa12.76□□□□□ -0.37
VAMP1-207ENST00000539047 LRRC75A-AS1Q8N1F1 130 aa12.76□□□□□ -0.37
VAMP1-207ENST00000539047 OR10A7Q8NGE5 316 aa12.76□□□□□ -0.37
VAMP1-207ENST00000539047 C10orf105Q8TEF2 133 aa12.76□□□□□ -0.37
VAMP1-207ENST00000539047 FAM216AQ8WUB2 273 aa12.76□□□□□ -0.37
VAMP1-207ENST00000539047 EDARADDQ8WWZ3 215 aa12.76□□□□□ -0.37
VAMP1-207ENST00000539047 TOMM40LQ969M1 308 aa12.76□□□□□ -0.37
VAMP1-207ENST00000539047 UPRTQ96BW1 309 aa12.76□□□□□ -0.37
VAMP1-207ENST00000539047 MOB3AQ96BX8 217 aa12.76□□□□□ -0.37
VAMP1-207ENST00000539047 MARVELD1Q9BSK0 173 aa12.76□□□□□ -0.37
VAMP1-207ENST00000539047 DCTN5Q9BTE1 182 aa12.76□□□□□ -0.37
VAMP1-207ENST00000539047 GPN1Q9HCN4 374 aaPredicted RBP12.76□□□□□ -0.37
VAMP1-207ENST00000539047 OR2S2Q9NQN1 319 aa12.76□□□□□ -0.37
VAMP1-207ENST00000539047 C19orf12Q9NSK7 152 aa12.76□□□□□ -0.37
VAMP1-207ENST00000539047 APCP25054 2843 aa12.76□□□□□ -0.37
VAMP1-207ENST00000539047 KIAA2026Q5HYC2 2103 aa12.76□□□□□ -0.37
VAMP1-207ENST00000539047 IGHV2-5P01817 119 aa12.75□□□□□ -0.37
VAMP1-207ENST00000539047 SLC25A16P16260 332 aa12.75□□□□□ -0.37
VAMP1-207ENST00000539047 AADACP22760 399 aa12.75□□□□□ -0.37
VAMP1-207ENST00000539047 CEACAM6P40199 344 aa12.75□□□□□ -0.37
VAMP1-207ENST00000539047 DEFB113Q30KQ7 82 aa12.75□□□□□ -0.37
VAMP1-207ENST00000539047 DOCK11Q5JSL3 2073 aa12.75□□□□□ -0.37
VAMP1-207ENST00000539047 LHFPL1Q86WI0 220 aa12.75□□□□□ -0.37
VAMP1-207ENST00000539047 H1FOOQ8IZA3 346 aaPredicted RBP12.75□□□□□ -0.37
VAMP1-207ENST00000539047 SLC38A6Q8IZM9 456 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms