RNA–Protein interactions for RNA: ENST00000538838.5

TMEM260-202, Transcript of transmembrane protein 260, humanhuman

TSL 1 (best) BASIC

Gene TMEM260, Length 1,638 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-202ENST00000538838 KIR2DS1Q14954 304 aa19.29■□□□□ 0.68
TMEM260-202ENST00000538838 ZNF554Q86TJ5 538 aa19.29■□□□□ 0.68
TMEM260-202ENST00000538838 KIRREL1Q96J84 757 aa19.29■□□□□ 0.68
TMEM260-202ENST00000538838 DMRTB1Q96MA1 342 aa19.29■□□□□ 0.68
TMEM260-202ENST00000538838 WDR12Q9GZL7 423 aaKnown RBP19.29■□□□□ 0.68
TMEM260-202ENST00000538838 SIRPDQ9H106 197 aa19.29■□□□□ 0.68
TMEM260-202ENST00000538838 NPIPB11E5RHQ5 1161 aa19.28■□□□□ 0.68
TMEM260-202ENST00000538838 M0R1W7 72 aa19.28■□□□□ 0.68
TMEM260-202ENST00000538838 FABP7O15540 132 aa19.28■□□□□ 0.68
TMEM260-202ENST00000538838 SPINT2O43291 252 aa19.28■□□□□ 0.68
TMEM260-202ENST00000538838 RBBP9O75884 186 aa19.28■□□□□ 0.68
TMEM260-202ENST00000538838 ACTBP60709 375 aa19.28■□□□□ 0.68
TMEM260-202ENST00000538838 ACTG1P63261 375 aa19.28■□□□□ 0.68
TMEM260-202ENST00000538838 ZNF846Q147U1 533 aa19.28■□□□□ 0.68
TMEM260-202ENST00000538838 ZNF782Q6ZMW2 699 aaPredicted RBP19.28■□□□□ 0.68
TMEM260-202ENST00000538838 GDPD1Q8N9F7 314 aa19.28■□□□□ 0.68
TMEM260-202ENST00000538838 IL1F10Q8WWZ1 152 aa19.28■□□□□ 0.68
TMEM260-202ENST00000538838 TRIM63Q969Q1 353 aa19.28■□□□□ 0.68
TMEM260-202ENST00000538838 THAP7Q9BT49 309 aaPredicted RBP19.28■□□□□ 0.68
TMEM260-202ENST00000538838 LINC00574Q9H8X3 128 aa19.28■□□□□ 0.68
TMEM260-202ENST00000538838 ANXA10Q9UJ72 324 aa19.28■□□□□ 0.68
TMEM260-202ENST00000538838 RBMX2Q9Y388 322 aaKnown RBP19.28■□□□□ 0.68
TMEM260-202ENST00000538838 KPTNQ9Y664 436 aa19.28■□□□□ 0.68
TMEM260-202ENST00000538838 IGKV1-6A0A0C4DH72 117 aa19.27■□□□□ 0.68
TMEM260-202ENST00000538838 PRB3Q04118 309 aaPredicted RBP19.27■□□□□ 0.68
TMEM260-202ENST00000538838 HERPUD1Q15011 391 aa19.27■□□□□ 0.68
TMEM260-202ENST00000538838 METTL11BQ5VVY1 283 aa19.27■□□□□ 0.68
TMEM260-202ENST00000538838 FAM53AQ6NSI3 398 aaPredicted RBP19.27■□□□□ 0.68
TMEM260-202ENST00000538838 HEPN1Q6WQI6 88 aa19.27■□□□□ 0.68
TMEM260-202ENST00000538838 TSC22D3Q99576 134 aa19.27■□□□□ 0.68
TMEM260-202ENST00000538838 SIRT7Q9NRC8 400 aa19.27■□□□□ 0.68
TMEM260-202ENST00000538838 IDI2-AS1Q9NZ38 188 aa19.27■□□□□ 0.68
TMEM260-202ENST00000538838 IGHV3-43A0A0B4J1X8 118 aa19.26■□□□□ 0.67
TMEM260-202ENST00000538838 J3QRK9 145 aa19.26■□□□□ 0.67
TMEM260-202ENST00000538838 IGHV1-8P0DP01 117 aa19.26■□□□□ 0.67
TMEM260-202ENST00000538838 IGHV3-43DP0DP04 118 aa19.26■□□□□ 0.67
TMEM260-202ENST00000538838 NAT1P18440 290 aa19.26■□□□□ 0.67
TMEM260-202ENST00000538838 HLA-DMAP28067 261 aa19.26■□□□□ 0.67
TMEM260-202ENST00000538838 PAX8Q06710 450 aa19.26■□□□□ 0.67
TMEM260-202ENST00000538838 BAK1Q16611 211 aa19.26■□□□□ 0.67
TMEM260-202ENST00000538838 IGSF11Q5DX21 431 aa19.26■□□□□ 0.67
TMEM260-202ENST00000538838 OR4A4PQ8NGN8 299 aa19.26■□□□□ 0.67
TMEM260-202ENST00000538838 PCGF1Q9BSM1 259 aa19.26■□□□□ 0.67
TMEM260-202ENST00000538838 FAM172BPA6NC97 362 aa19.25■□□□□ 0.67
TMEM260-202ENST00000538838 F2RL2O00254 374 aa19.25■□□□□ 0.67
TMEM260-202ENST00000538838 RBP4P02753 201 aa19.25■□□□□ 0.67
TMEM260-202ENST00000538838 MMP9P14780 707 aa19.25■□□□□ 0.67
TMEM260-202ENST00000538838 GATA3P23771 443 aa19.25■□□□□ 0.67
TMEM260-202ENST00000538838 FPR2P25090 351 aa19.25■□□□□ 0.67
TMEM260-202ENST00000538838 UTF1Q5T230 341 aa19.25■□□□□ 0.67
TMEM260-202ENST00000538838 FAHD2BQ6P2I3 314 aaPredicted RBP19.25■□□□□ 0.67
TMEM260-202ENST00000538838 VMO1Q7Z5L0 202 aa19.25■□□□□ 0.67
TMEM260-202ENST00000538838 GALMQ96C23 342 aa19.25■□□□□ 0.67
TMEM260-202ENST00000538838 FAHD2AQ96GK7 314 aa19.25■□□□□ 0.67
TMEM260-202ENST00000538838 SDCBPO00560 298 aaPredicted RBP19.25■□□□□ 0.67
TMEM260-202ENST00000538838 TOX4O94842 621 aa19.25■□□□□ 0.67
TMEM260-202ENST00000538838 NFYBP25208 207 aa19.25■□□□□ 0.67
TMEM260-202ENST00000538838 PPP5CP53041 499 aa19.25■□□□□ 0.67
TMEM260-202ENST00000538838 ARPC4P59998 168 aa19.25■□□□□ 0.67
TMEM260-202ENST00000538838 SSBP1Q04837 148 aaKnown RBP19.25■□□□□ 0.67
TMEM260-202ENST00000538838 GNMTQ14749 295 aa19.25■□□□□ 0.67
TMEM260-202ENST00000538838 CHRFAM7AQ494W8 412 aa19.25■□□□□ 0.67
TMEM260-202ENST00000538838 LYSMD2Q8IV50 215 aa19.25■□□□□ 0.67
TMEM260-202ENST00000538838 OR52L2PQ8NGH6 319 aa19.25■□□□□ 0.67
TMEM260-202ENST00000538838 CABLES2Q9BTV7 478 aa19.25■□□□□ 0.67
TMEM260-202ENST00000538838 TMUB1Q9BVT8 246 aa19.25■□□□□ 0.67
TMEM260-202ENST00000538838 TMPRSS13Q9BYE2 586 aa19.25■□□□□ 0.67
TMEM260-202ENST00000538838 METTL8Q9H825 291 aaKnown RBP19.25■□□□□ 0.67
TMEM260-202ENST00000538838 RAB9BQ9NP90 201 aa19.25■□□□□ 0.67
TMEM260-202ENST00000538838 OR1A1Q9P1Q5 309 aa19.25■□□□□ 0.67
TMEM260-202ENST00000538838 hCG_1809904A0A1W2PP81 198 aa19.24■□□□□ 0.67
TMEM260-202ENST00000538838 A0A1W2PPE2 198 aa19.24■□□□□ 0.67
TMEM260-202ENST00000538838 A0A1W2PR64 198 aa19.24■□□□□ 0.67
TMEM260-202ENST00000538838 A0A1W2PRV1 198 aa19.24■□□□□ 0.67
TMEM260-202ENST00000538838 BET1O15155 118 aa19.24■□□□□ 0.67
TMEM260-202ENST00000538838 CD40LGP29965 261 aa19.24■□□□□ 0.67
TMEM260-202ENST00000538838 OR5AP2Q8NGF4 316 aa19.24■□□□□ 0.67
TMEM260-202ENST00000538838 OR10V1Q8NGI7 309 aa19.24■□□□□ 0.67
TMEM260-202ENST00000538838 TBX15Q96SF7 602 aa19.24■□□□□ 0.67
TMEM260-202ENST00000538838 C7orf69Q9H7B7 122 aa19.24■□□□□ 0.67
TMEM260-202ENST00000538838 SLC23A1Q9UHI7 598 aa19.24■□□□□ 0.67
TMEM260-202ENST00000538838 SESN1Q9Y6P5 492 aa19.24■□□□□ 0.67
TMEM260-202ENST00000538838 HIVEP1P15822 2718 aa19.24■□□□□ 0.67
TMEM260-202ENST00000538838 HRH1P35367 487 aa19.23■□□□□ 0.67
TMEM260-202ENST00000538838 LOXL3P58215 753 aa19.23■□□□□ 0.67
TMEM260-202ENST00000538838 C1orf122Q6ZSJ8 110 aa19.23■□□□□ 0.67
TMEM260-202ENST00000538838 LEAP2Q969E1 77 aa19.23■□□□□ 0.67
TMEM260-202ENST00000538838 SMR3AQ99954 134 aa19.23■□□□□ 0.67
TMEM260-202ENST00000538838 SUCNR1Q9BXA5 334 aa19.23■□□□□ 0.67
TMEM260-202ENST00000538838 OR2S2Q9NQN1 319 aa19.23■□□□□ 0.67
TMEM260-202ENST00000538838 AUP1Q9Y679 476 aa19.23■□□□□ 0.67
TMEM260-202ENST00000538838 ZNF736B4DX44 427 aaPredicted RBP19.22■□□□□ 0.67
TMEM260-202ENST00000538838 CD5LO43866 347 aa19.22■□□□□ 0.67
TMEM260-202ENST00000538838 IGHV3-7P01780 117 aa19.22■□□□□ 0.67
TMEM260-202ENST00000538838 PMP2P02689 132 aa19.22■□□□□ 0.67
TMEM260-202ENST00000538838 CD3DP04234 171 aa19.22■□□□□ 0.67
TMEM260-202ENST00000538838 CSF1P09603 554 aa19.22■□□□□ 0.67
TMEM260-202ENST00000538838 IL7P13232 177 aa19.22■□□□□ 0.67
TMEM260-202ENST00000538838 CD99P14209 185 aa19.22■□□□□ 0.67
TMEM260-202ENST00000538838 TAS2R46P59540 309 aa19.22■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms