RNA–Protein interactions for RNA: ENST00000538545.6

ACTN1-205, Transcript of actinin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene ACTN1, Length 2,813 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-205ENST00000538545 CSMD1Q96PZ7 3565 aa11.84□□□□□ -0.51
ACTN1-205ENST00000538545 TRBV6-7A0A0A0MS04 114 aa11.84□□□□□ -0.51
ACTN1-205ENST00000538545 C12orf77C9JDV5 145 aa11.84□□□□□ -0.51
ACTN1-205ENST00000538545 IGHV1-46P01743 117 aa11.84□□□□□ -0.51
ACTN1-205ENST00000538545 CEACAM6P40199 344 aa11.84□□□□□ -0.51
ACTN1-205ENST00000538545 TESK1Q15569 626 aa11.84□□□□□ -0.51
ACTN1-205ENST00000538545 TMEM108Q6UXF1 575 aa11.84□□□□□ -0.51
ACTN1-205ENST00000538545 OR13A1Q8NGR1 328 aa11.84□□□□□ -0.51
ACTN1-205ENST00000538545 NMES1Q9C002 83 aa11.84□□□□□ -0.51
ACTN1-205ENST00000538545 SPEF1Q9Y4P9 236 aa11.84□□□□□ -0.51
ACTN1-205ENST00000538545 IGLV3-9A0A075B6K5 115 aa11.83□□□□□ -0.52
ACTN1-205ENST00000538545 CCL21O00585 134 aa11.83□□□□□ -0.52
ACTN1-205ENST00000538545 PLAUP00749 431 aa11.83□□□□□ -0.52
ACTN1-205ENST00000538545 FGL1Q08830 312 aa11.83□□□□□ -0.52
ACTN1-205ENST00000538545 Q6ZS49 121 aa11.83□□□□□ -0.52
ACTN1-205ENST00000538545 OR10V1Q8NGI7 309 aa11.83□□□□□ -0.52
ACTN1-205ENST00000538545 PIK3IP1Q96FE7 263 aa11.83□□□□□ -0.52
ACTN1-205ENST00000538545 ZNF471Q9BX82 626 aaPredicted RBP11.83□□□□□ -0.52
ACTN1-205ENST00000538545 IFT22Q9H7X7 185 aa11.83□□□□□ -0.52
ACTN1-205ENST00000538545 JKAMPQ9P055 326 aa11.83□□□□□ -0.52
ACTN1-205ENST00000538545 UBQLN2Q9UHD9 624 aa11.83□□□□□ -0.52
ACTN1-205ENST00000538545 MED13LQ71F56 2210 aa11.83□□□□□ -0.52
ACTN1-205ENST00000538545 A0A0B4J2A0 478 aa11.83□□□□□ -0.52
ACTN1-205ENST00000538545 B8ZZF3 427 aa11.83□□□□□ -0.52
ACTN1-205ENST00000538545 IGLV2-14P01704 120 aa11.83□□□□□ -0.52
ACTN1-205ENST00000538545 OR4A8P0C604 315 aa11.83□□□□□ -0.52
ACTN1-205ENST00000538545 ZNF16P17020 682 aaPredicted RBP11.83□□□□□ -0.52
ACTN1-205ENST00000538545 PRDX2P32119 198 aa11.83□□□□□ -0.52
ACTN1-205ENST00000538545 ECI1P42126 302 aa11.83□□□□□ -0.52
ACTN1-205ENST00000538545 KRBOX4Q5JUW0 171 aa11.83□□□□□ -0.52
ACTN1-205ENST00000538545 LIAT1Q6ZQX7 453 aa11.83□□□□□ -0.52
ACTN1-205ENST00000538545 PIGMQ9H3S5 423 aa11.83□□□□□ -0.52
ACTN1-205ENST00000538545 SHPKQ9UHJ6 478 aa11.83□□□□□ -0.52
ACTN1-205ENST00000538545 KCNS2Q9ULS6 477 aa11.83□□□□□ -0.52
ACTN1-205ENST00000538545 OR2W1Q9Y3N9 320 aa11.83□□□□□ -0.52
ACTN1-205ENST00000538545 PRSS44E7EML9 344 aa11.82□□□□□ -0.52
ACTN1-205ENST00000538545 UCNP55089 124 aa11.82□□□□□ -0.52
ACTN1-205ENST00000538545 RBPJQ06330 500 aa11.82□□□□□ -0.52
ACTN1-205ENST00000538545 IL15RAQ13261 267 aa11.82□□□□□ -0.52
ACTN1-205ENST00000538545 SMIM21Q3B7S5 101 aa11.82□□□□□ -0.52
ACTN1-205ENST00000538545 H1FOOQ8IZA3 346 aaPredicted RBP11.82□□□□□ -0.52
ACTN1-205ENST00000538545 OR4A4PQ8NGN8 299 aa11.82□□□□□ -0.52
ACTN1-205ENST00000538545 CXorf58Q96LI9 332 aa11.82□□□□□ -0.52
ACTN1-205ENST00000538545 UBE2J1Q9Y385 318 aaPredicted RBP11.82□□□□□ -0.52
ACTN1-205ENST00000538545 MAB21L2Q9Y586 359 aa11.82□□□□□ -0.52
ACTN1-205ENST00000538545 SRRM5B3KS81 715 aa11.82□□□□□ -0.52
ACTN1-205ENST00000538545 SLC25A4P12235 298 aa11.82□□□□□ -0.52
ACTN1-205ENST00000538545 PPP1CCP36873 323 aaKnown RBP11.82□□□□□ -0.52
ACTN1-205ENST00000538545 ID4P47928 161 aa11.82□□□□□ -0.52
ACTN1-205ENST00000538545 TNFAIP6P98066 277 aaPredicted RBP11.82□□□□□ -0.52
ACTN1-205ENST00000538545 ADIPOQQ15848 244 aa11.82□□□□□ -0.52
ACTN1-205ENST00000538545 NDUFA5Q16718 116 aa11.82□□□□□ -0.52
ACTN1-205ENST00000538545 OR2B11Q5JQS5 317 aa11.82□□□□□ -0.52
ACTN1-205ENST00000538545 LILRB1Q8NHL6 650 aaPredicted RBP11.82□□□□□ -0.52
ACTN1-205ENST00000538545 ZCCHC14Q8WYQ9 949 aaKnown RBP11.82□□□□□ -0.52
ACTN1-205ENST00000538545 GALNT14Q96FL9 552 aa11.82□□□□□ -0.52
ACTN1-205ENST00000538545 POM121Q96HA1 1249 aa11.82□□□□□ -0.52
ACTN1-205ENST00000538545 GCM1Q9NP62 436 aa11.82□□□□□ -0.52
ACTN1-205ENST00000538545 WIPI2Q9Y4P8 454 aa11.82□□□□□ -0.52
ACTN1-205ENST00000538545 GPR31O00270 319 aa11.82□□□□□ -0.52
ACTN1-205ENST00000538545 TPD52L2O43399 206 aaKnown RBP11.82□□□□□ -0.52
ACTN1-205ENST00000538545 IFNA7P01567 189 aa11.82□□□□□ -0.52
ACTN1-205ENST00000538545 UCP3P55916 312 aa11.82□□□□□ -0.52
ACTN1-205ENST00000538545 KLRB1Q12918 225 aa11.82□□□□□ -0.52
ACTN1-205ENST00000538545 FIP1L1Q6UN15 594 aaKnown RBP11.82□□□□□ -0.52
ACTN1-205ENST00000538545 ACOT7LQ6ZUV0 252 aa11.82□□□□□ -0.52
ACTN1-205ENST00000538545 ZNF808Q8N4W9 903 aaPredicted RBP11.82□□□□□ -0.52
ACTN1-205ENST00000538545 INO80EQ8NBZ0 244 aaPredicted RBP11.82□□□□□ -0.52
ACTN1-205ENST00000538545 BSCL2Q96G97 398 aaPredicted RBP11.82□□□□□ -0.52
ACTN1-205ENST00000538545 SMIM3Q9BZL3 60 aa11.82□□□□□ -0.52
ACTN1-205ENST00000538545 RIMS4Q9H426 269 aaPredicted RBP11.82□□□□□ -0.52
ACTN1-205ENST00000538545 IGSF10Q6WRI0 2623 aa11.81□□□□□ -0.52
ACTN1-205ENST00000538545 TRBV6-6A0A0A6YYG2 114 aa11.81□□□□□ -0.52
ACTN1-205ENST00000538545 ANKRD34BA5PLL1 514 aa11.81□□□□□ -0.52
ACTN1-205ENST00000538545 PGLYRP1O75594 196 aaPredicted RBP11.81□□□□□ -0.52
ACTN1-205ENST00000538545 CD200P41217 278 aa11.81□□□□□ -0.52
ACTN1-205ENST00000538545 ASCL1P50553 236 aa11.81□□□□□ -0.52
ACTN1-205ENST00000538545 EDDM3BP56851 147 aa11.81□□□□□ -0.52
ACTN1-205ENST00000538545 TMEM65Q6PI78 240 aa11.81□□□□□ -0.52
ACTN1-205ENST00000538545 KCNRGQ8N5I3 272 aa11.81□□□□□ -0.52
ACTN1-205ENST00000538545 SPERTQ8NA61 448 aa11.81□□□□□ -0.52
ACTN1-205ENST00000538545 VKORC1Q9BQB6 163 aa11.81□□□□□ -0.52
ACTN1-205ENST00000538545 OR2S2Q9NQN1 319 aa11.81□□□□□ -0.52
ACTN1-205ENST00000538545 MBNL3Q9NUK0 354 aaKnown RBP11.81□□□□□ -0.52
ACTN1-205ENST00000538545 PCDHB10Q9UN67 800 aa11.81□□□□□ -0.52
ACTN1-205ENST00000538545 F5H0A9 414 aaPredicted RBP11.81□□□□□ -0.52
ACTN1-205ENST00000538545 HBZP02008 142 aa11.81□□□□□ -0.52
ACTN1-205ENST00000538545 MBPP02686 304 aaPredicted RBP11.81□□□□□ -0.52
ACTN1-205ENST00000538545 LMO1P25800 156 aa11.81□□□□□ -0.52
ACTN1-205ENST00000538545 ERVFRD-1P60508 538 aa11.81□□□□□ -0.52
ACTN1-205ENST00000538545 UNQ6494/PRO21346Q6UXR6 183 aa11.81□□□□□ -0.52
ACTN1-205ENST00000538545 ST8SIA2Q92186 375 aa11.81□□□□□ -0.52
ACTN1-205ENST00000538545 C18orf12Q96KH6 178 aa11.81□□□□□ -0.52
ACTN1-205ENST00000538545 DHRS9Q9BPW9 319 aa11.81□□□□□ -0.52
ACTN1-205ENST00000538545 MAGT1Q9H0U3 335 aa11.81□□□□□ -0.52
ACTN1-205ENST00000538545 ELOVL5Q9NYP7 299 aa11.81□□□□□ -0.52
ACTN1-205ENST00000538545 DSCAML1Q8TD84 2053 aa11.81□□□□□ -0.52
ACTN1-205ENST00000538545 A0A0G2JRQ6 117 aa11.8□□□□□ -0.52
ACTN1-205ENST00000538545 KANTRA0A1W2PQU2 76 aa11.8□□□□□ -0.52
ACTN1-205ENST00000538545 TMEM30CPA0ZSE6 113 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms