RNA–Protein interactions for RNA: ENST00000538077.2

LINC00346-201, long intergenic non-protein coding RNA 346, humanhuman

BASIC

Gene LINC00346, Length 6,265 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00346-201ENST00000538077 WSB1Q9Y6I7 421 aa9.74□□□□□ -0.85
LINC00346-201ENST00000538077 C11orf94C9JXX5 98 aa9.74□□□□□ -0.85
LINC00346-201ENST00000538077 J3QT63 122 aa9.74□□□□□ -0.85
LINC00346-201ENST00000538077 SYNGR2O43760 224 aa9.74□□□□□ -0.85
LINC00346-201ENST00000538077 PPYP01298 95 aa9.74□□□□□ -0.85
LINC00346-201ENST00000538077 IGHV3-23P01764 117 aa9.74□□□□□ -0.85
LINC00346-201ENST00000538077 INHBBP09529 407 aa9.74□□□□□ -0.85
LINC00346-201ENST00000538077 TWIST1Q15672 202 aa9.74□□□□□ -0.85
LINC00346-201ENST00000538077 FAM216AQ8WUB2 273 aa9.74□□□□□ -0.85
LINC00346-201ENST00000538077 NPAS1Q99742 590 aa9.74□□□□□ -0.85
LINC00346-201ENST00000538077 PHOX2AO14813 284 aa9.74□□□□□ -0.85
LINC00346-201ENST00000538077 UBE2L6O14933 153 aa9.74□□□□□ -0.85
LINC00346-201ENST00000538077 TMEM50BP56557 158 aa9.74□□□□□ -0.85
LINC00346-201ENST00000538077 SAP25Q8TEE9 199 aa9.74□□□□□ -0.85
LINC00346-201ENST00000538077 DCTN5Q9BTE1 182 aa9.74□□□□□ -0.85
LINC00346-201ENST00000538077 B4E171 279 aa9.74□□□□□ -0.85
LINC00346-201ENST00000538077 TSPAN7P41732 249 aa9.74□□□□□ -0.85
LINC00346-201ENST00000538077 ERVFRD-1P60508 538 aa9.74□□□□□ -0.85
LINC00346-201ENST00000538077 PMS2P11Q13670 270 aa9.74□□□□□ -0.85
LINC00346-201ENST00000538077 MRPL54Q6P161 138 aaKnown RBP9.74□□□□□ -0.85
LINC00346-201ENST00000538077 C12orf57Q99622 126 aa9.74□□□□□ -0.85
LINC00346-201ENST00000538077 FAM157CP0CG43 387 aa9.74□□□□□ -0.85
LINC00346-201ENST00000538077 SRXN1Q9BYN0 137 aa9.74□□□□□ -0.85
LINC00346-201ENST00000538077 GHITMQ9H3K2 345 aa9.74□□□□□ -0.85
LINC00346-201ENST00000538077 SMCHD1A6NHR9 2005 aa9.74□□□□□ -0.85
LINC00346-201ENST00000538077 IGKV1-8A0A0C4DH67 115 aa9.73□□□□□ -0.85
LINC00346-201ENST00000538077 OR2T8A6NH00 312 aa9.73□□□□□ -0.85
LINC00346-201ENST00000538077 J3QR06 171 aa9.73□□□□□ -0.85
LINC00346-201ENST00000538077 PLAUP00749 431 aa9.73□□□□□ -0.85
LINC00346-201ENST00000538077 FAM87AP0C7U9 286 aa9.73□□□□□ -0.85
LINC00346-201ENST00000538077 DAOP14920 347 aa9.73□□□□□ -0.85
LINC00346-201ENST00000538077 CHCHD2P9Q5T1J5 151 aaPredicted RBP9.73□□□□□ -0.85
LINC00346-201ENST00000538077 FAM214BQ7L5A3 538 aa9.73□□□□□ -0.85
LINC00346-201ENST00000538077 RPS4Y2Q8TD47 263 aa9.73□□□□□ -0.85
LINC00346-201ENST00000538077 C16orf92Q96LL3 132 aa9.73□□□□□ -0.85
LINC00346-201ENST00000538077 ZMAT5Q9UDW3 170 aaKnown RBP9.73□□□□□ -0.85
LINC00346-201ENST00000538077 K7N7A8 449 aa9.73□□□□□ -0.85
LINC00346-201ENST00000538077 SULT1A1P50225 295 aa9.73□□□□□ -0.85
LINC00346-201ENST00000538077 DMKNQ6E0U4 476 aaPredicted RBP9.73□□□□□ -0.85
LINC00346-201ENST00000538077 DDA1Q9BW61 102 aa9.73□□□□□ -0.85
LINC00346-201ENST00000538077 LPAR5Q9H1C0 372 aa9.73□□□□□ -0.85
LINC00346-201ENST00000538077 HIGD1AQ9Y241 93 aa9.73□□□□□ -0.85
LINC00346-201ENST00000538077 CTSDP07339 412 aaPredicted RBP9.73□□□□□ -0.85
LINC00346-201ENST00000538077 GZMHP20718 246 aa9.73□□□□□ -0.85
LINC00346-201ENST00000538077 KHDC3LQ587J8 217 aa9.73□□□□□ -0.85
LINC00346-201ENST00000538077 SLC26A10Q8NG04 563 aa9.73□□□□□ -0.85
LINC00346-201ENST00000538077 ANGPTL6Q8NI99 470 aa9.73□□□□□ -0.85
LINC00346-201ENST00000538077 ABHD1Q96SE0 405 aa9.73□□□□□ -0.85
LINC00346-201ENST00000538077 SLIRPQ9GZT3 109 aaKnown RBP9.73□□□□□ -0.85
LINC00346-201ENST00000538077 MIA3Q5JRA6 1907 aa9.73□□□□□ -0.85
LINC00346-201ENST00000538077 ATG2BQ96BY7 2078 aa9.73□□□□□ -0.85
LINC00346-201ENST00000538077 TRIP12Q14669 1992 aaPredicted RBP9.73□□□□□ -0.85
LINC00346-201ENST00000538077 FAM181BA6NEQ2 426 aa9.73□□□□□ -0.85
LINC00346-201ENST00000538077 LMX1BO60663 402 aa9.73□□□□□ -0.85
LINC00346-201ENST00000538077 FAM106CPP0CH98 169 aa9.73□□□□□ -0.85
LINC00346-201ENST00000538077 STARD6P59095 220 aa9.73□□□□□ -0.85
LINC00346-201ENST00000538077 SPCS3P61009 180 aa9.73□□□□□ -0.85
LINC00346-201ENST00000538077 FAM24BQ8N5W8 94 aa9.73□□□□□ -0.85
LINC00346-201ENST00000538077 OR5A2Q8NGI9 324 aa9.73□□□□□ -0.85
LINC00346-201ENST00000538077 OR2W1Q9Y3N9 320 aa9.73□□□□□ -0.85
LINC00346-201ENST00000538077 SCN3AQ9NY46 2000 aa9.73□□□□□ -0.85
LINC00346-201ENST00000538077 SMPD2O60906 423 aa9.73□□□□□ -0.85
LINC00346-201ENST00000538077 AREGP15514 252 aa9.73□□□□□ -0.85
LINC00346-201ENST00000538077 COL8A1P27658 744 aa9.73□□□□□ -0.85
LINC00346-201ENST00000538077 RANP62826 216 aaKnown RBP9.73□□□□□ -0.85
LINC00346-201ENST00000538077 IGSF11Q5DX21 431 aa9.73□□□□□ -0.85
LINC00346-201ENST00000538077 A0A1W2PRX2 142 aa9.72□□□□□ -0.85
LINC00346-201ENST00000538077 ZNF738Q8NE65 137 aa9.72□□□□□ -0.85
LINC00346-201ENST00000538077 OR8A1Q8NGG7 326 aa9.72□□□□□ -0.85
LINC00346-201ENST00000538077 TLNRD1Q9H1K6 362 aa9.72□□□□□ -0.85
LINC00346-201ENST00000538077 PRNDQ9UKY0 176 aa9.72□□□□□ -0.85
LINC00346-201ENST00000538077 ARF6P62330 175 aa9.72□□□□□ -0.85
LINC00346-201ENST00000538077 SNAI3Q3KNW1 292 aa9.72□□□□□ -0.85
LINC00346-201ENST00000538077 CD300LDQ6UXZ3 194 aa9.72□□□□□ -0.85
LINC00346-201ENST00000538077 LSMEM1Q8N8F7 131 aa9.72□□□□□ -0.85
LINC00346-201ENST00000538077 IL17BQ9UHF5 180 aa9.72□□□□□ -0.85
LINC00346-201ENST00000538077 KLK13Q9UKR3 277 aa9.72□□□□□ -0.85
LINC00346-201ENST00000538077 TDRD15B5MCY1 1934 aaKnown RBP9.72□□□□□ -0.85
LINC00346-201ENST00000538077 OR4C46A6NHA9 309 aa9.72□□□□□ -0.85
LINC00346-201ENST00000538077 CTSSP25774 331 aa9.72□□□□□ -0.85
LINC00346-201ENST00000538077 HSD17B13Q7Z5P4 300 aaPredicted RBP9.72□□□□□ -0.85
LINC00346-201ENST00000538077 OR8G5Q8NG78 346 aa9.72□□□□□ -0.85
LINC00346-201ENST00000538077 IGKV3OR2-268A0A0C4DH90 116 aa9.72□□□□□ -0.85
LINC00346-201ENST00000538077 MFNGO00587 321 aa9.72□□□□□ -0.85
LINC00346-201ENST00000538077 TM4SF20Q53R12 229 aa9.72□□□□□ -0.85
LINC00346-201ENST00000538077 PRSS54Q6PEW0 395 aa9.72□□□□□ -0.85
LINC00346-201ENST00000538077 OR2D3Q8NGH3 330 aa9.72□□□□□ -0.85
LINC00346-201ENST00000538077 PRO1933Q9H354 126 aa9.72□□□□□ -0.85
LINC00346-201ENST00000538077 IFT22Q9H7X7 185 aa9.72□□□□□ -0.85
LINC00346-201ENST00000538077 RCC2Q9P258 522 aaKnown RBP9.72□□□□□ -0.85
LINC00346-201ENST00000538077 OR2H2O95918 312 aa9.72□□□□□ -0.85
LINC00346-201ENST00000538077 IGKV3-20P01619 116 aa9.72□□□□□ -0.85
LINC00346-201ENST00000538077 PF4P02776 101 aa9.72□□□□□ -0.85
LINC00346-201ENST00000538077 COX6A1P12074 109 aa9.72□□□□□ -0.85
LINC00346-201ENST00000538077 SLC6A1P30531 599 aa9.72□□□□□ -0.85
LINC00346-201ENST00000538077 DUX5Q96PT3 197 aa9.72□□□□□ -0.85
LINC00346-201ENST00000538077 GPHA2Q96T91 129 aa9.72□□□□□ -0.85
LINC00346-201ENST00000538077 RALYQ9UKM9 306 aaKnown RBP9.72□□□□□ -0.85
LINC00346-201ENST00000538077 PRR33A8MZF0 331 aa9.71□□□□□ -0.85
LINC00346-201ENST00000538077 PAGE4O60829 102 aa9.71□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms