RNA–Protein interactions for RNA: ENST00000536218.5

LIG1-203, Transcript of DNA ligase 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LIG1, Length 3,179 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-203ENST00000536218 NKX6-3A6NJ46 265 aa12.05□□□□□ -0.48
LIG1-203ENST00000536218 GSTP1P09211 210 aaKnown RBP12.05□□□□□ -0.48
LIG1-203ENST00000536218 HSD11B1P28845 292 aa12.05□□□□□ -0.48
LIG1-203ENST00000536218 FGF8P55075 233 aaPredicted RBP12.05□□□□□ -0.48
LIG1-203ENST00000536218 PIGPP57054 158 aa12.05□□□□□ -0.48
LIG1-203ENST00000536218 FXYD4P59646 89 aa12.05□□□□□ -0.48
LIG1-203ENST00000536218 RTP5Q14D33 572 aa12.05□□□□□ -0.48
LIG1-203ENST00000536218 PHLDA2Q53GA4 152 aa12.05□□□□□ -0.48
LIG1-203ENST00000536218 OR5T1Q8NG75 326 aa12.05□□□□□ -0.48
LIG1-203ENST00000536218 OR5D18Q8NGL1 313 aa12.05□□□□□ -0.48
LIG1-203ENST00000536218 RNF133Q8WVZ7 376 aa12.05□□□□□ -0.48
LIG1-203ENST00000536218 ANGPTL4Q9BY76 406 aa12.05□□□□□ -0.48
LIG1-203ENST00000536218 SDF2L1Q9HCN8 221 aa12.05□□□□□ -0.48
LIG1-203ENST00000536218 TMEM242Q9NWH2 141 aa12.05□□□□□ -0.48
LIG1-203ENST00000536218 A0A1W2PNV4 684 aa12.04□□□□□ -0.48
LIG1-203ENST00000536218 H7BYZ3 331 aa12.04□□□□□ -0.48
LIG1-203ENST00000536218 TNFSF11O14788 317 aa12.04□□□□□ -0.48
LIG1-203ENST00000536218 ZIC3O60481 467 aa12.04□□□□□ -0.48
LIG1-203ENST00000536218 LIFP15018 202 aa12.04□□□□□ -0.48
LIG1-203ENST00000536218 MLF1P58340 268 aa12.04□□□□□ -0.48
LIG1-203ENST00000536218 TAS2R46P59540 309 aa12.04□□□□□ -0.48
LIG1-203ENST00000536218 ZNF92Q03936 586 aa12.04□□□□□ -0.48
LIG1-203ENST00000536218 Q0VFX4 171 aa12.04□□□□□ -0.48
LIG1-203ENST00000536218 ABCA11PQ4W5N1 156 aa12.04□□□□□ -0.48
LIG1-203ENST00000536218 C6orf15Q6UXA7 325 aaPredicted RBP12.04□□□□□ -0.48
LIG1-203ENST00000536218 PPP1R32Q7Z5V6 425 aa12.04□□□□□ -0.48
LIG1-203ENST00000536218 TMEM170AQ8WVE7 144 aa12.04□□□□□ -0.48
LIG1-203ENST00000536218 RBMXL1Q96E39 390 aaKnown RBP12.04□□□□□ -0.48
LIG1-203ENST00000536218 MAGT1Q9H0U3 335 aa12.04□□□□□ -0.48
LIG1-203ENST00000536218 ZNF665Q9H7R5 613 aa12.04□□□□□ -0.48
LIG1-203ENST00000536218 LHFPL6Q9Y693 200 aa12.04□□□□□ -0.48
LIG1-203ENST00000536218 CEBPZOSA8MTT3 80 aa12.04□□□□□ -0.48
LIG1-203ENST00000536218 ACP1P24666 158 aa12.04□□□□□ -0.48
LIG1-203ENST00000536218 OR3A4PP47883 348 aa12.04□□□□□ -0.48
LIG1-203ENST00000536218 SELENOTP62341 195 aa12.04□□□□□ -0.48
LIG1-203ENST00000536218 SLC25A24Q6NUK1 477 aa12.04□□□□□ -0.48
LIG1-203ENST00000536218 CALHM1Q8IU99 346 aa12.04□□□□□ -0.48
LIG1-203ENST00000536218 FBXL14Q8N1E6 418 aa12.04□□□□□ -0.48
LIG1-203ENST00000536218 VAMP8Q9BV40 100 aa12.04□□□□□ -0.48
LIG1-203ENST00000536218 GPR84Q9NQS5 396 aa12.04□□□□□ -0.48
LIG1-203ENST00000536218 LOC102723971A0A1B0GUV8 181 aa12.04□□□□□ -0.48
LIG1-203ENST00000536218 TRDCB7Z8K6 153 aa12.04□□□□□ -0.48
LIG1-203ENST00000536218 NXPH3O95157 252 aa12.04□□□□□ -0.48
LIG1-203ENST00000536218 MRPS34P82930 218 aaKnown RBP12.04□□□□□ -0.48
LIG1-203ENST00000536218 ATP6V1FQ16864 119 aa12.04□□□□□ -0.48
LIG1-203ENST00000536218 MEX3BQ6ZN04 569 aaKnown RBP12.04□□□□□ -0.48
LIG1-203ENST00000536218 LGI3Q8N145 548 aa12.04□□□□□ -0.48
LIG1-203ENST00000536218 LYG1Q8N1E2 194 aa12.04□□□□□ -0.48
LIG1-203ENST00000536218 OR51T1Q8NGJ9 327 aa12.04□□□□□ -0.48
LIG1-203ENST00000536218 OR5L1Q8NGL2 311 aa12.04□□□□□ -0.48
LIG1-203ENST00000536218 OR5C1Q8NGR4 320 aa12.04□□□□□ -0.48
LIG1-203ENST00000536218 OR51E1Q8TCB6 317 aa12.04□□□□□ -0.48
LIG1-203ENST00000536218 VN1R17PQ8TDU5 208 aa12.04□□□□□ -0.48
LIG1-203ENST00000536218 ZCCHC14Q8WYQ9 949 aaKnown RBP12.04□□□□□ -0.48
LIG1-203ENST00000536218 PLA2G3Q9NZ20 509 aa12.04□□□□□ -0.48
LIG1-203ENST00000536218 RPH3ALQ9UNE2 315 aa12.04□□□□□ -0.48
LIG1-203ENST00000536218 LOC102724200A0A096LPH7 203 aaPredicted RBP12.03□□□□□ -0.48
LIG1-203ENST00000536218 AQP7P3A6NL99 342 aa12.03□□□□□ -0.48
LIG1-203ENST00000536218 M0QZ24 198 aa12.03□□□□□ -0.48
LIG1-203ENST00000536218 SRSF10O75494 262 aaKnown RBP12.03□□□□□ -0.48
LIG1-203ENST00000536218 OR5G3P0C626 314 aa12.03□□□□□ -0.48
LIG1-203ENST00000536218 ANOS1P23352 680 aa12.03□□□□□ -0.48
LIG1-203ENST00000536218 CNN1P51911 297 aaKnown RBP12.03□□□□□ -0.48
LIG1-203ENST00000536218 KLF3P57682 345 aaPredicted RBP12.03□□□□□ -0.48
LIG1-203ENST00000536218 RSPO4Q2I0M5 234 aaPredicted RBP12.03□□□□□ -0.48
LIG1-203ENST00000536218 DPPA3Q6W0C5 159 aa12.03□□□□□ -0.48
LIG1-203ENST00000536218 SMIM15Q7Z3B0 74 aa12.03□□□□□ -0.48
LIG1-203ENST00000536218 OR2C3Q8N628 320 aa12.03□□□□□ -0.48
LIG1-203ENST00000536218 TECTBQ96PL2 329 aa12.03□□□□□ -0.48
LIG1-203ENST00000536218 RBM24Q9BX46 236 aaKnown RBP12.03□□□□□ -0.48
LIG1-203ENST00000536218 PBOV1Q9GZY1 135 aa12.03□□□□□ -0.48
LIG1-203ENST00000536218 TRAV34A0A0B4J273 112 aa12.03□□□□□ -0.48
LIG1-203ENST00000536218 TMEM14DPA8MWL7 114 aa12.03□□□□□ -0.48
LIG1-203ENST00000536218 NUPR1O60356 82 aa12.03□□□□□ -0.48
LIG1-203ENST00000536218 HBE1P02100 147 aa12.03□□□□□ -0.48
LIG1-203ENST00000536218 TTRP02766 147 aa12.03□□□□□ -0.48
LIG1-203ENST00000536218 P04436 131 aa12.03□□□□□ -0.48
LIG1-203ENST00000536218 CSNK1A1P48729 337 aa12.03□□□□□ -0.48
LIG1-203ENST00000536218 STPG4Q8N801 248 aa12.03□□□□□ -0.48
LIG1-203ENST00000536218 A0A0J9YW62 118 aa12.02□□□□□ -0.48
LIG1-203ENST00000536218 NPIPA2E9PIF3 369 aa12.02□□□□□ -0.48
LIG1-203ENST00000536218 NPIPA3F8WFD2 350 aa12.02□□□□□ -0.48
LIG1-203ENST00000536218 PFN1P07737 140 aaKnown RBP12.02□□□□□ -0.48
LIG1-203ENST00000536218 RFPL3SP0C7P2 107 aa12.02□□□□□ -0.48
LIG1-203ENST00000536218 GUCA1AP43080 201 aaPredicted RBP12.02□□□□□ -0.48
LIG1-203ENST00000536218 DSCR4P56555 118 aaPredicted RBP12.02□□□□□ -0.48
LIG1-203ENST00000536218 TMEM183BQ1AE95 376 aa12.02□□□□□ -0.48
LIG1-203ENST00000536218 LYPD6Q86Y78 171 aa12.02□□□□□ -0.48
LIG1-203ENST00000536218 TMEM171Q8WVE6 324 aa12.02□□□□□ -0.48
LIG1-203ENST00000536218 FAM71F1Q96KD3 344 aaPredicted RBP12.02□□□□□ -0.48
LIG1-203ENST00000536218 SMIM7Q9BQ49 75 aa12.02□□□□□ -0.48
LIG1-203ENST00000536218 STRADBQ9C0K7 418 aa12.02□□□□□ -0.48
LIG1-203ENST00000536218 CTDSP1Q9GZU7 261 aa12.02□□□□□ -0.48
LIG1-203ENST00000536218 ELL3Q9HB65 397 aaPredicted RBP12.02□□□□□ -0.48
LIG1-203ENST00000536218 NCOA6Q14686 2063 aaPredicted RBP12.02□□□□□ -0.49
LIG1-203ENST00000536218 IGKV1D-8A0A087WSZ0 117 aa12.02□□□□□ -0.49
LIG1-203ENST00000536218 IGSF23A1L1A6 192 aa12.02□□□□□ -0.49
LIG1-203ENST00000536218 NPIPB13A6NJU9 1138 aa12.02□□□□□ -0.49
LIG1-203ENST00000536218 NPIPB4C9JG80 1138 aa12.02□□□□□ -0.49
LIG1-203ENST00000536218 TLX3O43711 291 aaPredicted RBP12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms