RNA–Protein interactions for RNA: ENST00000536194.1

TNFRSF1A-208, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 3

Gene TNFRSF1A, Length 581 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-208ENST00000536194 LGALS4P56470 323 aa9.15□□□□□ -0.94
TNFRSF1A-208ENST00000536194 VBP1P61758 197 aa9.15□□□□□ -0.94
TNFRSF1A-208ENST00000536194 CTF1Q16619 201 aa9.15□□□□□ -0.94
TNFRSF1A-208ENST00000536194 HLA-DRB5Q30154 266 aa9.15□□□□□ -0.94
TNFRSF1A-208ENST00000536194 IDNKQ5T6J7 187 aa9.15□□□□□ -0.94
TNFRSF1A-208ENST00000536194 ZNF880Q6PDB4 577 aa9.15□□□□□ -0.94
TNFRSF1A-208ENST00000536194 Q6ZTK2 550 aa9.15□□□□□ -0.94
TNFRSF1A-208ENST00000536194 TMEM86BQ8N661 226 aa9.15□□□□□ -0.94
TNFRSF1A-208ENST00000536194 OR10A7Q8NGE5 316 aa9.15□□□□□ -0.94
TNFRSF1A-208ENST00000536194 OR56B1Q8NGI3 324 aa9.15□□□□□ -0.94
TNFRSF1A-208ENST00000536194 OR10R2Q8NGX6 335 aa9.15□□□□□ -0.94
TNFRSF1A-208ENST00000536194 PIFOQ8TCI5 191 aa9.15□□□□□ -0.94
TNFRSF1A-208ENST00000536194 SLC25A38Q96DW6 304 aa9.15□□□□□ -0.94
TNFRSF1A-208ENST00000536194 PSG11Q9UQ72 335 aa9.15□□□□□ -0.94
TNFRSF1A-208ENST00000536194 POMT1Q9Y6A1 747 aa9.15□□□□□ -0.94
TNFRSF1A-208ENST00000536194 IGHV3-43A0A0B4J1X8 118 aa9.14□□□□□ -0.95
TNFRSF1A-208ENST00000536194 A0A1W2PPE3 182 aa9.14□□□□□ -0.95
TNFRSF1A-208ENST00000536194 LY6LH3BQJ8 138 aa9.14□□□□□ -0.95
TNFRSF1A-208ENST00000536194 J3QR06 171 aa9.14□□□□□ -0.95
TNFRSF1A-208ENST00000536194 SDCBPO00560 298 aaPredicted RBP9.14□□□□□ -0.95
TNFRSF1A-208ENST00000536194 HBZP02008 142 aa9.14□□□□□ -0.95
TNFRSF1A-208ENST00000536194 IGHV3-43DP0DP04 118 aa9.14□□□□□ -0.95
TNFRSF1A-208ENST00000536194 GNB3P16520 340 aa9.14□□□□□ -0.95
TNFRSF1A-208ENST00000536194 GNG10P50151 68 aa9.14□□□□□ -0.95
TNFRSF1A-208ENST00000536194 HMGN3Q15651 99 aa9.14□□□□□ -0.95
TNFRSF1A-208ENST00000536194 SSX2Q16385 188 aa9.14□□□□□ -0.95
TNFRSF1A-208ENST00000536194 PLA1AQ53H76 456 aa9.14□□□□□ -0.95
TNFRSF1A-208ENST00000536194 C6orf183Q5T699 404 aa9.14□□□□□ -0.95
TNFRSF1A-208ENST00000536194 MINOS1Q5TGZ0 78 aa9.14□□□□□ -0.95
TNFRSF1A-208ENST00000536194 GPR107Q5VW38 600 aa9.14□□□□□ -0.95
TNFRSF1A-208ENST00000536194 C16orf87Q6PH81 154 aa9.14□□□□□ -0.95
TNFRSF1A-208ENST00000536194 ANKRD13BQ86YJ7 626 aa9.14□□□□□ -0.95
TNFRSF1A-208ENST00000536194 PRR18Q8N4B5 295 aa9.14□□□□□ -0.95
TNFRSF1A-208ENST00000536194 NDNFQ8TB73 568 aa9.14□□□□□ -0.95
TNFRSF1A-208ENST00000536194 ZNF596Q8TC21 504 aa9.14□□□□□ -0.95
TNFRSF1A-208ENST00000536194 RAB3CQ96E17 227 aa9.14□□□□□ -0.95
TNFRSF1A-208ENST00000536194 MALSU1Q96EH3 234 aa9.14□□□□□ -0.95
TNFRSF1A-208ENST00000536194 SSX3Q99909 188 aa9.14□□□□□ -0.95
TNFRSF1A-208ENST00000536194 ZMAT3Q9HA38 289 aaKnown RBP9.14□□□□□ -0.95
TNFRSF1A-208ENST00000536194 TAF9BQ9HBM6 251 aa9.14□□□□□ -0.95
TNFRSF1A-208ENST00000536194 GFOD1Q9NXC2 390 aa9.14□□□□□ -0.95
TNFRSF1A-208ENST00000536194 ELF5Q9UKW6 265 aaPredicted RBP9.14□□□□□ -0.95
TNFRSF1A-208ENST00000536194 HILPDAQ9Y5L2 63 aa9.14□□□□□ -0.95
TNFRSF1A-208ENST00000536194 MINOS1-NBL1R4GNA1 71 aa9.14□□□□□ -0.95
TNFRSF1A-208ENST00000536194 ATRQ13535 2644 aa9.14□□□□□ -0.95
TNFRSF1A-208ENST00000536194 TRBV6-6A0A0A6YYG2 114 aa9.13□□□□□ -0.95
TNFRSF1A-208ENST00000536194 FAM181BA6NEQ2 426 aa9.13□□□□□ -0.95
TNFRSF1A-208ENST00000536194 VGLL3A8MV65 326 aa9.13□□□□□ -0.95
TNFRSF1A-208ENST00000536194 BUB1B-PAK6H3BSN5 160 aa9.13□□□□□ -0.95
TNFRSF1A-208ENST00000536194 H3BUX3 64 aa9.13□□□□□ -0.95
TNFRSF1A-208ENST00000536194 SLC31A2O15432 143 aa9.13□□□□□ -0.95
TNFRSF1A-208ENST00000536194 HIST1H1DP16402 221 aaKnown RBP9.13□□□□□ -0.95
TNFRSF1A-208ENST00000536194 HTR1DP28221 377 aa9.13□□□□□ -0.95
TNFRSF1A-208ENST00000536194 SERPINB10P48595 397 aa9.13□□□□□ -0.95
TNFRSF1A-208ENST00000536194 RAB13P51153 203 aa9.13□□□□□ -0.95
TNFRSF1A-208ENST00000536194 SCAND1P57086 179 aa9.13□□□□□ -0.95
TNFRSF1A-208ENST00000536194 GNMTQ14749 295 aa9.13□□□□□ -0.95
TNFRSF1A-208ENST00000536194 LRRC75BQ2VPJ9 315 aa9.13□□□□□ -0.95
TNFRSF1A-208ENST00000536194 TRAT1Q6PIZ9 186 aa9.13□□□□□ -0.95
TNFRSF1A-208ENST00000536194 ZNF554Q86TJ5 538 aa9.13□□□□□ -0.95
TNFRSF1A-208ENST00000536194 ZNF439Q8NDP4 499 aa9.13□□□□□ -0.95
TNFRSF1A-208ENST00000536194 OR52M1Q8NGK5 317 aa9.13□□□□□ -0.95
TNFRSF1A-208ENST00000536194 OR9G1Q8NH87 305 aa9.13□□□□□ -0.95
TNFRSF1A-208ENST00000536194 SLC25A46Q96AG3 418 aa9.13□□□□□ -0.95
TNFRSF1A-208ENST00000536194 ATG5Q9H1Y0 275 aa9.13□□□□□ -0.95
TNFRSF1A-208ENST00000536194 MMP28Q9H239 520 aa9.13□□□□□ -0.95
TNFRSF1A-208ENST00000536194 DPAGT1Q9H3H5 408 aa9.13□□□□□ -0.95
TNFRSF1A-208ENST00000536194 C12orf4Q9NQ89 552 aa9.13□□□□□ -0.95
TNFRSF1A-208ENST00000536194 DPM3Q9P2X0 92 aa9.13□□□□□ -0.95
TNFRSF1A-208ENST00000536194 A0A075B6Q4 140 aa9.12□□□□□ -0.95
TNFRSF1A-208ENST00000536194 TMEM89A2RUT3 159 aa9.12□□□□□ -0.95
TNFRSF1A-208ENST00000536194 METTL21EPA6NDL7 271 aa9.12□□□□□ -0.95
TNFRSF1A-208ENST00000536194 TOR1AO14656 332 aa9.12□□□□□ -0.95
TNFRSF1A-208ENST00000536194 SPINT2O43291 252 aa9.12□□□□□ -0.95
TNFRSF1A-208ENST00000536194 GPR137BO60478 399 aa9.12□□□□□ -0.95
TNFRSF1A-208ENST00000536194 ZNF134P52741 427 aa9.12□□□□□ -0.95
TNFRSF1A-208ENST00000536194 PRRX1P54821 245 aa9.12□□□□□ -0.95
TNFRSF1A-208ENST00000536194 RELBQ01201 579 aa9.12□□□□□ -0.95
TNFRSF1A-208ENST00000536194 DIAPH2-AS1Q14236 149 aa9.12□□□□□ -0.95
TNFRSF1A-208ENST00000536194 FAM189A2Q15884 450 aa9.12□□□□□ -0.95
TNFRSF1A-208ENST00000536194 AANATQ16613 207 aa9.12□□□□□ -0.95
TNFRSF1A-208ENST00000536194 FBLN7Q53RD9 439 aa9.12□□□□□ -0.95
TNFRSF1A-208ENST00000536194 TPTE2P1Q5T6R2 138 aa9.12□□□□□ -0.95
TNFRSF1A-208ENST00000536194 CCBE1Q6UXH8 406 aaPredicted RBP9.12□□□□□ -0.95
TNFRSF1A-208ENST00000536194 GPR141Q7Z602 305 aa9.12□□□□□ -0.95
TNFRSF1A-208ENST00000536194 OR52L2PQ8NGH6 319 aa9.12□□□□□ -0.95
TNFRSF1A-208ENST00000536194 OR10V1Q8NGI7 309 aa9.12□□□□□ -0.95
TNFRSF1A-208ENST00000536194 CMSS1Q9BQ75 279 aaKnown RBP9.12□□□□□ -0.95
TNFRSF1A-208ENST00000536194 CHMP1AQ9HD42 196 aaPredicted RBP9.12□□□□□ -0.95
TNFRSF1A-208ENST00000536194 Q9N2K0 584 aa9.12□□□□□ -0.95
TNFRSF1A-208ENST00000536194 RHBDL2Q9NX52 303 aa9.12□□□□□ -0.95
TNFRSF1A-208ENST00000536194 VPREB3Q9UKI3 123 aa9.12□□□□□ -0.95
TNFRSF1A-208ENST00000536194 SPATA2Q9UM82 520 aa9.12□□□□□ -0.95
TNFRSF1A-208ENST00000536194 CHST1O43916 411 aa9.11□□□□□ -0.95
TNFRSF1A-208ENST00000536194 FCGR3AP08637 254 aa9.11□□□□□ -0.95
TNFRSF1A-208ENST00000536194 HKR1P10072 659 aa9.11□□□□□ -0.95
TNFRSF1A-208ENST00000536194 PPP1CCP36873 323 aaKnown RBP9.11□□□□□ -0.95
TNFRSF1A-208ENST00000536194 ACTG1P63261 375 aa9.11□□□□□ -0.95
TNFRSF1A-208ENST00000536194 HTD2P86397 168 aa9.11□□□□□ -0.95
TNFRSF1A-208ENST00000536194 LY6EQ16553 131 aa9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms