RNA–Protein interactions for RNA: ENST00000535977.5

RAB40C-203, Transcript of RAB40C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 5 BASIC

Gene RAB40C, Length 2,717 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-203ENST00000535977 ABI3Q9P2A4 366 aa15.4■□□□□ 0.06
RAB40C-203ENST00000535977 FAM90A10PA6NDY2 464 aa15.4■□□□□ 0.06
RAB40C-203ENST00000535977 FAM90A18PA6NE21 464 aa15.4■□□□□ 0.06
RAB40C-203ENST00000535977 FAM90A16PA6NEW6 464 aa15.4■□□□□ 0.06
RAB40C-203ENST00000535977 FAM90A20PA6NIJ5 464 aa15.4■□□□□ 0.06
RAB40C-203ENST00000535977 FAM90A8PA6NJQ4 464 aa15.4■□□□□ 0.06
RAB40C-203ENST00000535977 FAM90A7PA6NKC0 464 aa15.4■□□□□ 0.06
RAB40C-203ENST00000535977 FAM90A22PA8MWA6 464 aa15.4■□□□□ 0.06
RAB40C-203ENST00000535977 FAM90A12PA8MX19 464 aa15.4■□□□□ 0.06
RAB40C-203ENST00000535977 FAM90A5PA8MXJ8 464 aa15.4■□□□□ 0.06
RAB40C-203ENST00000535977 FAM90A23PA8MXZ1 464 aa15.4■□□□□ 0.06
RAB40C-203ENST00000535977 PDCD6O75340 191 aa15.4■□□□□ 0.06
RAB40C-203ENST00000535977 FAM90A15PP0C7V4 464 aa15.4■□□□□ 0.06
RAB40C-203ENST00000535977 FAM90A13PP0C7W8 464 aa15.4■□□□□ 0.06
RAB40C-203ENST00000535977 FAM90A14PP0C7W9 464 aa15.4■□□□□ 0.06
RAB40C-203ENST00000535977 FAM90A24PP0C7X0 464 aa15.4■□□□□ 0.06
RAB40C-203ENST00000535977 CLN3Q13286 438 aa15.4■□□□□ 0.06
RAB40C-203ENST00000535977 ABCA11PQ4W5N1 156 aa15.4■□□□□ 0.06
RAB40C-203ENST00000535977 PLCXD3Q63HM9 321 aa15.4■□□□□ 0.06
RAB40C-203ENST00000535977 COLCA1Q6ZS62 124 aa15.4■□□□□ 0.06
RAB40C-203ENST00000535977 LRTM2Q8N967 370 aa15.4■□□□□ 0.06
RAB40C-203ENST00000535977 HIST1H2AAQ96QV6 131 aa15.4■□□□□ 0.06
RAB40C-203ENST00000535977 SPRY4Q9C004 299 aa15.4■□□□□ 0.06
RAB40C-203ENST00000535977 ST3GAL6Q9Y274 331 aa15.4■□□□□ 0.06
RAB40C-203ENST00000535977 HSPB1P04792 205 aaKnown RBP15.39■□□□□ 0.05
RAB40C-203ENST00000535977 PATE4P0C8F1 98 aa15.39■□□□□ 0.05
RAB40C-203ENST00000535977 P2RY6Q15077 328 aa15.39■□□□□ 0.05
RAB40C-203ENST00000535977 RSPO4Q2I0M5 234 aaPredicted RBP15.39■□□□□ 0.05
RAB40C-203ENST00000535977 SAPCD1Q5SSQ6 148 aa15.39■□□□□ 0.05
RAB40C-203ENST00000535977 FBXL14Q8N1E6 418 aa15.39■□□□□ 0.05
RAB40C-203ENST00000535977 TRBV24-1A0A075B6N3 115 aa15.39■□□□□ 0.05
RAB40C-203ENST00000535977 B4DEV8 164 aa15.39■□□□□ 0.05
RAB40C-203ENST00000535977 M0QZK8 103 aa15.39■□□□□ 0.05
RAB40C-203ENST00000535977 GGCTO75223 188 aaKnown RBP15.39■□□□□ 0.05
RAB40C-203ENST00000535977 PIGPP57054 158 aa15.39■□□□□ 0.05
RAB40C-203ENST00000535977 IQCJQ1A5X6 159 aa15.39■□□□□ 0.05
RAB40C-203ENST00000535977 FAM185AQ8N0U4 392 aa15.39■□□□□ 0.05
RAB40C-203ENST00000535977 C17orf78Q8N4C9 275 aa15.39■□□□□ 0.05
RAB40C-203ENST00000535977 OR2G3Q8NGZ4 309 aa15.39■□□□□ 0.05
RAB40C-203ENST00000535977 PIGCQ92535 297 aa15.39■□□□□ 0.05
RAB40C-203ENST00000535977 CABLES2Q9BTV7 478 aa15.39■□□□□ 0.05
RAB40C-203ENST00000535977 NAA60Q9H7X0 242 aa15.39■□□□□ 0.05
RAB40C-203ENST00000535977 JMJD7P0C870 316 aa15.38■□□□□ 0.05
RAB40C-203ENST00000535977 ZNF506Q5JVG8 444 aa15.38■□□□□ 0.05
RAB40C-203ENST00000535977 C1orf194Q5T5A4 169 aa15.38■□□□□ 0.05
RAB40C-203ENST00000535977 Q8NFD4 153 aa15.38■□□□□ 0.05
RAB40C-203ENST00000535977 OR10A7Q8NGE5 316 aa15.38■□□□□ 0.05
RAB40C-203ENST00000535977 ABHD3Q8WU67 409 aa15.38■□□□□ 0.05
RAB40C-203ENST00000535977 VAX2Q9UIW0 290 aa15.38■□□□□ 0.05
RAB40C-203ENST00000535977 IGKV1-12A0A0C4DH73 117 aa15.38■□□□□ 0.05
RAB40C-203ENST00000535977 IGKV1D-12P01611 117 aa15.38■□□□□ 0.05
RAB40C-203ENST00000535977 RRADP55042 308 aa15.38■□□□□ 0.05
RAB40C-203ENST00000535977 RBM11P57052 281 aaKnown RBP15.38■□□□□ 0.05
RAB40C-203ENST00000535977 GPR157Q5UAW9 335 aa15.38■□□□□ 0.05
RAB40C-203ENST00000535977 ABHD17BQ5VST6 288 aa15.38■□□□□ 0.05
RAB40C-203ENST00000535977 ZNF705AQ6ZN79 300 aaPredicted RBP15.38■□□□□ 0.05
RAB40C-203ENST00000535977 SLC25A26Q70HW3 274 aa15.38■□□□□ 0.05
RAB40C-203ENST00000535977 SAXO1Q8IYX7 474 aa15.38■□□□□ 0.05
RAB40C-203ENST00000535977 FGFBP3Q8TAT2 258 aa15.38■□□□□ 0.05
RAB40C-203ENST00000535977 RTTNQ86VV8 2226 aa15.38■□□□□ 0.05
RAB40C-203ENST00000535977 SYNGR4O95473 234 aa15.37■□□□□ 0.05
RAB40C-203ENST00000535977 OPRM1P35372 400 aa15.37■□□□□ 0.05
RAB40C-203ENST00000535977 PMS2P11Q13670 270 aa15.37■□□□□ 0.05
RAB40C-203ENST00000535977 SRSF7Q16629 238 aaKnown RBP eCLIP15.37■□□□□ 0.05
RAB40C-203ENST00000535977 COA6Q5JTJ3 125 aaKnown RBP15.37■□□□□ 0.05
RAB40C-203ENST00000535977 CCDC71LQ8N9Z2 235 aa15.37■□□□□ 0.05
RAB40C-203ENST00000535977 OR2M7Q8NG81 312 aa15.37■□□□□ 0.05
RAB40C-203ENST00000535977 LPAR2Q9HBW0 351 aa15.37■□□□□ 0.05
RAB40C-203ENST00000535977 PLSCR2Q9NRY7 297 aa15.37■□□□□ 0.05
RAB40C-203ENST00000535977 POLR3KQ9Y2Y1 108 aaPredicted RBP15.37■□□□□ 0.05
RAB40C-203ENST00000535977 KIR2DL5BA0A0G2JN68 375 aa15.37■□□□□ 0.05
RAB40C-203ENST00000535977 KIR2DL5BA0A0G2JPC4 375 aa15.37■□□□□ 0.05
RAB40C-203ENST00000535977 PINLYPA6NC86 204 aa15.37■□□□□ 0.05
RAB40C-203ENST00000535977 C21orf140B9A014 251 aa15.37■□□□□ 0.05
RAB40C-203ENST00000535977 IFNL4K9M1U5 179 aa15.37■□□□□ 0.05
RAB40C-203ENST00000535977 MSTNO14793 375 aa15.37■□□□□ 0.05
RAB40C-203ENST00000535977 IRF2P14316 349 aa15.37■□□□□ 0.05
RAB40C-203ENST00000535977 TSPO2Q5TGU0 170 aa15.37■□□□□ 0.05
RAB40C-203ENST00000535977 P4HA3Q7Z4N8 544 aa15.37■□□□□ 0.05
RAB40C-203ENST00000535977 MRPL41Q8IXM3 137 aaKnown RBP15.37■□□□□ 0.05
RAB40C-203ENST00000535977 KIR2DL5AQ8N109 375 aa15.37■□□□□ 0.05
RAB40C-203ENST00000535977 NEK7Q8TDX7 302 aa15.37■□□□□ 0.05
RAB40C-203ENST00000535977 RTN4IP1Q8WWV3 396 aaPredicted RBP15.37■□□□□ 0.05
RAB40C-203ENST00000535977 ZNF845Q96IR2 970 aaPredicted RBP15.37■□□□□ 0.05
RAB40C-203ENST00000535977 A0A1B0GU03 582 aa15.37■□□□□ 0.05
RAB40C-203ENST00000535977 TMEM187Q14656 261 aa15.37■□□□□ 0.05
RAB40C-203ENST00000535977 PIGYQ3MUY2 71 aa15.37■□□□□ 0.05
RAB40C-203ENST00000535977 TMEM242Q9NWH2 141 aa15.37■□□□□ 0.05
RAB40C-203ENST00000535977 GAB2Q9UQC2 676 aa15.37■□□□□ 0.05
RAB40C-203ENST00000535977 NCKAP5O14513 1909 aa15.36■□□□□ 0.05
RAB40C-203ENST00000535977 CACNA1HO95180 2353 aa15.36■□□□□ 0.05
RAB40C-203ENST00000535977 TCF21O43680 179 aa15.36■□□□□ 0.05
RAB40C-203ENST00000535977 CYB5R3P00387 301 aaPredicted RBP15.36■□□□□ 0.05
RAB40C-203ENST00000535977 SELEP16581 610 aa15.36■□□□□ 0.05
RAB40C-203ENST00000535977 ATP6V0CP27449 155 aa15.36■□□□□ 0.05
RAB40C-203ENST00000535977 NOVA1P51513 510 aaKnown RBP15.36■□□□□ 0.05
RAB40C-203ENST00000535977 SPINK14Q6IE38 97 aa15.36■□□□□ 0.05
RAB40C-203ENST00000535977 Q6ZS49 121 aa15.36■□□□□ 0.05
RAB40C-203ENST00000535977 OR8G5Q8NG78 346 aa15.36■□□□□ 0.05
RAB40C-203ENST00000535977 MOB3AQ96BX8 217 aa15.36■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms