RNA–Protein interactions for RNA: ENST00000535493.5

HDAC4-214, Transcript of histone deacetylase 4, humanhuman

TSL 2

Gene HDAC4, Length 2,743 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-214ENST00000535493 CACNG5Q9UF02 275 aa11.45□□□□□ -0.58
HDAC4-214ENST00000535493 OR6C6A6NF89 314 aa11.45□□□□□ -0.58
HDAC4-214ENST00000535493 TSTD3H0UI37 97 aa11.45□□□□□ -0.58
HDAC4-214ENST00000535493 FOXG1P55316 489 aaPredicted RBP11.45□□□□□ -0.58
HDAC4-214ENST00000535493 CARD18P57730 90 aa11.45□□□□□ -0.58
HDAC4-214ENST00000535493 EIF3IQ13347 325 aaKnown RBP11.45□□□□□ -0.58
HDAC4-214ENST00000535493 PCOLCEQ15113 449 aa11.45□□□□□ -0.58
HDAC4-214ENST00000535493 CA5BP1Q8WTZ4 195 aa11.45□□□□□ -0.58
HDAC4-214ENST00000535493 CCDC74BQ96LY2 380 aa11.45□□□□□ -0.58
HDAC4-214ENST00000535493 OR14J1Q9UGF5 321 aa11.45□□□□□ -0.58
HDAC4-214ENST00000535493 PPP1R3CQ9UQK1 317 aa11.45□□□□□ -0.58
HDAC4-214ENST00000535493 LAMA5O15230 3695 aa11.45□□□□□ -0.58
HDAC4-214ENST00000535493 ZNF816-ZNF321PA0A0X1KG74 233 aa11.44□□□□□ -0.58
HDAC4-214ENST00000535493 VAMP5O95183 116 aa11.44□□□□□ -0.58
HDAC4-214ENST00000535493 SERPINE2P07093 398 aa11.44□□□□□ -0.58
HDAC4-214ENST00000535493 MMP7P09237 267 aaPredicted RBP11.44□□□□□ -0.58
HDAC4-214ENST00000535493 GZMHP20718 246 aa11.44□□□□□ -0.58
HDAC4-214ENST00000535493 UCP1P25874 307 aa11.44□□□□□ -0.58
HDAC4-214ENST00000535493 PKIAP61925 76 aa11.44□□□□□ -0.58
HDAC4-214ENST00000535493 SPANXN5Q5MJ07 72 aa11.44□□□□□ -0.58
HDAC4-214ENST00000535493 OR8G2PQ6IF36 304 aa11.44□□□□□ -0.58
HDAC4-214ENST00000535493 ZDHHC23Q8IYP9 409 aa11.44□□□□□ -0.58
HDAC4-214ENST00000535493 ZNF664Q8N3J9 261 aa11.44□□□□□ -0.58
HDAC4-214ENST00000535493 THOC3Q96J01 351 aaKnown RBP11.44□□□□□ -0.58
HDAC4-214ENST00000535493 SDF2L1Q9HCN8 221 aa11.44□□□□□ -0.58
HDAC4-214ENST00000535493 OR1A1Q9P1Q5 309 aa11.44□□□□□ -0.58
HDAC4-214ENST00000535493 LAMP3Q9UQV4 416 aa11.44□□□□□ -0.58
HDAC4-214ENST00000535493 PTRH2Q9Y3E5 179 aaKnown RBP11.44□□□□□ -0.58
HDAC4-214ENST00000535493 GZMBP10144 247 aa11.44□□□□□ -0.58
HDAC4-214ENST00000535493 DSCR4P56555 118 aaPredicted RBP11.44□□□□□ -0.58
HDAC4-214ENST00000535493 SRPXP78539 464 aa11.44□□□□□ -0.58
HDAC4-214ENST00000535493 CYB5R2Q6BCY4 276 aa11.44□□□□□ -0.58
HDAC4-214ENST00000535493 REC114Q7Z4M0 266 aa11.44□□□□□ -0.58
HDAC4-214ENST00000535493 SCGB1C1Q8TD33 95 aa11.44□□□□□ -0.58
HDAC4-214ENST00000535493 TMEM37Q8WXS4 190 aa11.44□□□□□ -0.58
HDAC4-214ENST00000535493 SGCZQ96LD1 299 aa11.44□□□□□ -0.58
HDAC4-214ENST00000535493 LILRA1O75019 489 aa11.44□□□□□ -0.58
HDAC4-214ENST00000535493 CYB5R3P00387 301 aaPredicted RBP11.44□□□□□ -0.58
HDAC4-214ENST00000535493 AMBPP02760 352 aa11.44□□□□□ -0.58
HDAC4-214ENST00000535493 WIPI1Q5MNZ9 446 aaPredicted RBP11.44□□□□□ -0.58
HDAC4-214ENST00000535493 HAPLN4Q86UW8 402 aa11.44□□□□□ -0.58
HDAC4-214ENST00000535493 KMT5CQ86Y97 462 aa11.44□□□□□ -0.58
HDAC4-214ENST00000535493 M1APQ8TC57 530 aa11.44□□□□□ -0.58
HDAC4-214ENST00000535493 GPR87Q9BY21 358 aa11.44□□□□□ -0.58
HDAC4-214ENST00000535493 A0A1W2PPQ1 181 aa11.43□□□□□ -0.58
HDAC4-214ENST00000535493 C9J4A7 227 aa11.43□□□□□ -0.58
HDAC4-214ENST00000535493 NGFP01138 241 aa11.43□□□□□ -0.58
HDAC4-214ENST00000535493 IGKV1-39P01597 117 aa11.43□□□□□ -0.58
HDAC4-214ENST00000535493 HBE1P02100 147 aa11.43□□□□□ -0.58
HDAC4-214ENST00000535493 IGKV1D-39P04432 117 aa11.43□□□□□ -0.58
HDAC4-214ENST00000535493 F2RP25116 425 aa11.43□□□□□ -0.58
HDAC4-214ENST00000535493 LBX1P52954 281 aa11.43□□□□□ -0.58
HDAC4-214ENST00000535493 SRYQ05066 204 aa11.43□□□□□ -0.58
HDAC4-214ENST00000535493 IL24Q13007 206 aa11.43□□□□□ -0.58
HDAC4-214ENST00000535493 PRDX4Q13162 271 aa11.43□□□□□ -0.58
HDAC4-214ENST00000535493 C16orf82Q7Z2V1 217 aa11.43□□□□□ -0.58
HDAC4-214ENST00000535493 VASH2Q86V25 355 aa11.43□□□□□ -0.58
HDAC4-214ENST00000535493 TGIF2LXQ8IUE1 241 aa11.43□□□□□ -0.58
HDAC4-214ENST00000535493 SMIM7Q9BQ49 75 aa11.43□□□□□ -0.58
HDAC4-214ENST00000535493 ZNF552Q9H707 407 aaPredicted RBP11.43□□□□□ -0.58
HDAC4-214ENST00000535493 PRR14LQ5THK1 2151 aa11.43□□□□□ -0.58
HDAC4-214ENST00000535493 C5orf49A4QMS7 147 aa11.43□□□□□ -0.58
HDAC4-214ENST00000535493 CYTIPO60759 359 aa11.43□□□□□ -0.58
HDAC4-214ENST00000535493 NAPSAO96009 420 aa11.43□□□□□ -0.58
HDAC4-214ENST00000535493 IGKV1D-33P01593 117 aa11.43□□□□□ -0.58
HDAC4-214ENST00000535493 IGKV1-33P01594 117 aa11.43□□□□□ -0.58
HDAC4-214ENST00000535493 CST2P09228 141 aa11.43□□□□□ -0.58
HDAC4-214ENST00000535493 RAC1P63000 192 aa11.43□□□□□ -0.58
HDAC4-214ENST00000535493 BAXQ07812 192 aa11.43□□□□□ -0.58
HDAC4-214ENST00000535493 FAM53AQ6NSI3 398 aaPredicted RBP11.43□□□□□ -0.58
HDAC4-214ENST00000535493 LILRB2Q8N423 598 aa11.43□□□□□ -0.58
HDAC4-214ENST00000535493 HIST1H2AAQ96QV6 131 aa11.43□□□□□ -0.58
HDAC4-214ENST00000535493 PCGF1Q9BSM1 259 aa11.43□□□□□ -0.58
HDAC4-214ENST00000535493 PLSCR2Q9NRY7 297 aa11.43□□□□□ -0.58
HDAC4-214ENST00000535493 NCKAP5O14513 1909 aa11.42□□□□□ -0.58
HDAC4-214ENST00000535493 ELOA3CA0A087WX78 387 aaPredicted RBP11.42□□□□□ -0.58
HDAC4-214ENST00000535493 HSFX4A0A1B0GTS1 333 aaPredicted RBP11.42□□□□□ -0.58
HDAC4-214ENST00000535493 A0A1B0GUS0 222 aa11.42□□□□□ -0.58
HDAC4-214ENST00000535493 UBE2L5PA0A1B0GUS4 154 aa11.42□□□□□ -0.58
HDAC4-214ENST00000535493 HSFX3A0A1B0GWH4 333 aaPredicted RBP11.42□□□□□ -0.58
HDAC4-214ENST00000535493 UMODP07911 640 aa11.42□□□□□ -0.58
HDAC4-214ENST00000535493 IGFBP4P22692 258 aa11.42□□□□□ -0.58
HDAC4-214ENST00000535493 PCSK4Q6UW60 755 aa11.42□□□□□ -0.58
HDAC4-214ENST00000535493 ZNF66Q6ZN08 573 aa11.42□□□□□ -0.58
HDAC4-214ENST00000535493 CARFQ8N187 725 aa11.42□□□□□ -0.58
HDAC4-214ENST00000535493 OR8G5Q8NG78 346 aa11.42□□□□□ -0.58
HDAC4-214ENST00000535493 OR10A7Q8NGE5 316 aa11.42□□□□□ -0.58
HDAC4-214ENST00000535493 PRRG4Q9BZD6 226 aa11.42□□□□□ -0.58
HDAC4-214ENST00000535493 SLC25A22Q9H936 323 aa11.42□□□□□ -0.58
HDAC4-214ENST00000535493 PSENENQ9NZ42 101 aa11.42□□□□□ -0.58
HDAC4-214ENST00000535493 C19orf25Q9UFG5 118 aaPredicted RBP11.42□□□□□ -0.58
HDAC4-214ENST00000535493 RBM7Q9Y580 266 aaKnown RBP11.42□□□□□ -0.58
HDAC4-214ENST00000535493 MED12LQ86YW9 2145 aa11.42□□□□□ -0.58
HDAC4-214ENST00000535493 XKRY2A2RUG3 117 aa11.42□□□□□ -0.58
HDAC4-214ENST00000535493 ZNF503-AS2A6NEH8 195 aa11.42□□□□□ -0.58
HDAC4-214ENST00000535493 KIAA1324LA8MWY0 1029 aaPredicted RBP11.42□□□□□ -0.58
HDAC4-214ENST00000535493 SLC31A2O15432 143 aa11.42□□□□□ -0.58
HDAC4-214ENST00000535493 WDR1O75083 606 aa11.42□□□□□ -0.58
HDAC4-214ENST00000535493 ZNF737O75373 536 aa11.42□□□□□ -0.58
HDAC4-214ENST00000535493 CLDN15P56746 228 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 106.4 ms