RNA–Protein interactions for RNA: ENST00000535038.1

TNFRSF1A-206, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 4

Gene TNFRSF1A, Length 578 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-206ENST00000535038 LILRB1Q8NHL6 650 aaPredicted RBP5□□□□□ -1.61
TNFRSF1A-206ENST00000535038 SIGLEC12Q96PQ1 595 aa5□□□□□ -1.61
TNFRSF1A-206ENST00000535038 TP53RKQ96S44 253 aa5□□□□□ -1.61
TNFRSF1A-206ENST00000535038 MICU1Q9BPX6 476 aa5□□□□□ -1.61
TNFRSF1A-206ENST00000535038 TMEM222Q9H0R3 208 aa5□□□□□ -1.61
TNFRSF1A-206ENST00000535038 OPA3Q9H6K4 179 aa5□□□□□ -1.61
TNFRSF1A-206ENST00000535038 ELL3Q9HB65 397 aaPredicted RBP5□□□□□ -1.61
TNFRSF1A-206ENST00000535038 MTCH1Q9NZJ7 389 aa5□□□□□ -1.61
TNFRSF1A-206ENST00000535038 GSKIPQ9P0R6 139 aa5□□□□□ -1.61
TNFRSF1A-206ENST00000535038 KCNIP3Q9Y2W7 256 aa5□□□□□ -1.61
TNFRSF1A-206ENST00000535038 FAM96BQ9Y3D0 163 aa5□□□□□ -1.61
TNFRSF1A-206ENST00000535038 ARID1AO14497 2285 aa5□□□□□ -1.61
TNFRSF1A-206ENST00000535038 AHCTF1Q8WYP5 2266 aa5□□□□□ -1.61
TNFRSF1A-206ENST00000535038 ZDBF2Q9HCK1 2354 aa5□□□□□ -1.61
TNFRSF1A-206ENST00000535038 ZNF407Q9C0G0 2248 aa5□□□□□ -1.61
TNFRSF1A-206ENST00000535038 IGKV1D-13A0A0B4J2D9 117 aa4.99□□□□□ -1.61
TNFRSF1A-206ENST00000535038 MEX3AA1L020 520 aaKnown RBP4.99□□□□□ -1.61
TNFRSF1A-206ENST00000535038 SLC22A20A6NK97 555 aa4.99□□□□□ -1.61
TNFRSF1A-206ENST00000535038 COLCA2A8K830 154 aa4.99□□□□□ -1.61
TNFRSF1A-206ENST00000535038 C21orf140B9A014 251 aa4.99□□□□□ -1.61
TNFRSF1A-206ENST00000535038 K7N7A8 449 aa4.99□□□□□ -1.61
TNFRSF1A-206ENST00000535038 ST8SIA3O43173 380 aa4.99□□□□□ -1.61
TNFRSF1A-206ENST00000535038 PITX3O75364 302 aa4.99□□□□□ -1.61
TNFRSF1A-206ENST00000535038 MRPL33O75394 65 aaKnown RBP4.99□□□□□ -1.61
TNFRSF1A-206ENST00000535038 MED6O75586 246 aa4.99□□□□□ -1.61
TNFRSF1A-206ENST00000535038 SNAPINO95295 136 aa4.99□□□□□ -1.61
TNFRSF1A-206ENST00000535038 IGKV1-13P0DP09 117 aa4.99□□□□□ -1.61
TNFRSF1A-206ENST00000535038 CD59P13987 128 aa4.99□□□□□ -1.61
TNFRSF1A-206ENST00000535038 MMP9P14780 707 aa4.99□□□□□ -1.61
TNFRSF1A-206ENST00000535038 BCL3P20749 454 aa4.99□□□□□ -1.61
TNFRSF1A-206ENST00000535038 IL32P24001 234 aa4.99□□□□□ -1.61
TNFRSF1A-206ENST00000535038 SNCAP37840 140 aa4.99□□□□□ -1.61
TNFRSF1A-206ENST00000535038 RFC3P40938 356 aa4.99□□□□□ -1.61
TNFRSF1A-206ENST00000535038 WNT5AP41221 380 aa4.99□□□□□ -1.61
TNFRSF1A-206ENST00000535038 RAB5CP51148 216 aa4.99□□□□□ -1.61
TNFRSF1A-206ENST00000535038 AKR1C2P52895 323 aa4.99□□□□□ -1.61
TNFRSF1A-206ENST00000535038 SRPXP78539 464 aa4.99□□□□□ -1.61
TNFRSF1A-206ENST00000535038 AKR1C1Q04828 323 aa4.99□□□□□ -1.61
TNFRSF1A-206ENST00000535038 SMCO1Q147U7 214 aa4.99□□□□□ -1.61
TNFRSF1A-206ENST00000535038 SP6Q3SY56 376 aa4.99□□□□□ -1.61
TNFRSF1A-206ENST00000535038 IGSF11Q5DX21 431 aa4.99□□□□□ -1.61
TNFRSF1A-206ENST00000535038 SHEQ5VZ18 495 aa4.99□□□□□ -1.61
TNFRSF1A-206ENST00000535038 ZNF324BQ6AW86 544 aaPredicted RBP4.99□□□□□ -1.61
TNFRSF1A-206ENST00000535038 SPINK14Q6IE38 97 aa4.99□□□□□ -1.61
TNFRSF1A-206ENST00000535038 Q6P435 159 aa4.99□□□□□ -1.61
TNFRSF1A-206ENST00000535038 Q6ZRG5 221 aa4.99□□□□□ -1.61
TNFRSF1A-206ENST00000535038 RAB11FIP2Q7L804 512 aa4.99□□□□□ -1.61
TNFRSF1A-206ENST00000535038 DPPA2Q7Z7J5 298 aa4.99□□□□□ -1.61
TNFRSF1A-206ENST00000535038 TMEM251Q8N6I4 163 aa4.99□□□□□ -1.61
TNFRSF1A-206ENST00000535038 OR5A2Q8NGI9 324 aa4.99□□□□□ -1.61
TNFRSF1A-206ENST00000535038 OR52M1Q8NGK5 317 aa4.99□□□□□ -1.61
TNFRSF1A-206ENST00000535038 OR5P3Q8WZ94 311 aa4.99□□□□□ -1.61
TNFRSF1A-206ENST00000535038 PIGCQ92535 297 aa4.99□□□□□ -1.61
TNFRSF1A-206ENST00000535038 BCL2L2Q92843 193 aaPredicted RBP4.99□□□□□ -1.61
TNFRSF1A-206ENST00000535038 IL22RA2Q969J5 263 aa4.99□□□□□ -1.61
TNFRSF1A-206ENST00000535038 APOBEC3DQ96AK3 386 aaPredicted RBP4.99□□□□□ -1.61
TNFRSF1A-206ENST00000535038 NARS2Q96I59 477 aaKnown RBP4.99□□□□□ -1.61
TNFRSF1A-206ENST00000535038 THOC3Q96J01 351 aaKnown RBP4.99□□□□□ -1.61
TNFRSF1A-206ENST00000535038 CABLES2Q9BTV7 478 aa4.99□□□□□ -1.61
TNFRSF1A-206ENST00000535038 ADAT1Q9BUB4 502 aaKnown RBP4.99□□□□□ -1.61
TNFRSF1A-206ENST00000535038 HES7Q9BYE0 225 aa4.99□□□□□ -1.61
TNFRSF1A-206ENST00000535038 TTTY12Q9BZ98 90 aa4.99□□□□□ -1.61
TNFRSF1A-206ENST00000535038 PKIBQ9C010 78 aa4.99□□□□□ -1.61
TNFRSF1A-206ENST00000535038 STRADBQ9C0K7 418 aa4.99□□□□□ -1.61
TNFRSF1A-206ENST00000535038 OR2S2Q9NQN1 319 aa4.99□□□□□ -1.61
TNFRSF1A-206ENST00000535038 LRFN1Q9P244 771 aa4.99□□□□□ -1.61
TNFRSF1A-206ENST00000535038 CACFD1Q9UGQ2 172 aa4.99□□□□□ -1.61
TNFRSF1A-206ENST00000535038 SLC45A2Q9UMX9 530 aa4.99□□□□□ -1.61
TNFRSF1A-206ENST00000535038 NOSIPQ9Y314 301 aaKnown RBP4.99□□□□□ -1.61
TNFRSF1A-206ENST00000535038 ESPL1Q14674 2120 aa4.99□□□□□ -1.61
TNFRSF1A-206ENST00000535038 MED12LQ86YW9 2145 aa4.99□□□□□ -1.61
TNFRSF1A-206ENST00000535038 DNAJC13O75165 2243 aa4.99□□□□□ -1.61
TNFRSF1A-206ENST00000535038 SPEGQ15772 3267 aa4.98□□□□□ -1.61
TNFRSF1A-206ENST00000535038 C3orf85A0A1B0GTC6 90 aa4.98□□□□□ -1.61
TNFRSF1A-206ENST00000535038 IGSF23A1L1A6 192 aa4.98□□□□□ -1.61
TNFRSF1A-206ENST00000535038 NKX2-6A6NCS4 301 aa4.98□□□□□ -1.61
TNFRSF1A-206ENST00000535038 F8W036 122 aa4.98□□□□□ -1.61
TNFRSF1A-206ENST00000535038 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP4.98□□□□□ -1.61
TNFRSF1A-206ENST00000535038 NME2P1O60361 137 aa4.98□□□□□ -1.61
TNFRSF1A-206ENST00000535038 TRAPPC6AO75865 159 aa4.98□□□□□ -1.61
TNFRSF1A-206ENST00000535038 TMEM50AO95807 157 aa4.98□□□□□ -1.61
TNFRSF1A-206ENST00000535038 HLA-HP01893 362 aa4.98□□□□□ -1.61
TNFRSF1A-206ENST00000535038 CTXN2P0C2S0 81 aa4.98□□□□□ -1.61
TNFRSF1A-206ENST00000535038 OR8U9P0C7N5 309 aa4.98□□□□□ -1.61
TNFRSF1A-206ENST00000535038 SLC25A6P12236 298 aa4.98□□□□□ -1.61
TNFRSF1A-206ENST00000535038 CEACAM1P13688 526 aa4.98□□□□□ -1.61
TNFRSF1A-206ENST00000535038 MAS1LP35410 378 aa4.98□□□□□ -1.61
TNFRSF1A-206ENST00000535038 ARR3P36575 388 aa4.98□□□□□ -1.61
TNFRSF1A-206ENST00000535038 GLP1RP43220 463 aa4.98□□□□□ -1.61
TNFRSF1A-206ENST00000535038 PAX9P55771 341 aa4.98□□□□□ -1.61
TNFRSF1A-206ENST00000535038 SOX8P57073 446 aa4.98□□□□□ -1.61
TNFRSF1A-206ENST00000535038 ERVK11-1P61568 191 aa4.98□□□□□ -1.61
TNFRSF1A-206ENST00000535038 SSBP2P81877 361 aaPredicted RBP4.98□□□□□ -1.61
TNFRSF1A-206ENST00000535038 EWSR1Q01844 656 aaKnown RBP eCLIP4.98□□□□□ -1.61
TNFRSF1A-206ENST00000535038 IL24Q13007 206 aa4.98□□□□□ -1.61
TNFRSF1A-206ENST00000535038 OR1C1Q15619 314 aa4.98□□□□□ -1.61
TNFRSF1A-206ENST00000535038 HMGN3Q15651 99 aa4.98□□□□□ -1.61
TNFRSF1A-206ENST00000535038 ABCA11PQ4W5N1 156 aa4.98□□□□□ -1.61
TNFRSF1A-206ENST00000535038 PHLDA2Q53GA4 152 aa4.98□□□□□ -1.61
TNFRSF1A-206ENST00000535038 FAM76BQ5HYJ3 339 aa4.98□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms