RNA–Protein interactions for RNA: ENST00000533129.5

CAPN1-224, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CAPN1, Length 2,792 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-224ENST00000533129 IFNA1P01562 189 aa12.66□□□□□ -0.38
CAPN1-224ENST00000533129 LCATP04180 440 aa12.66□□□□□ -0.38
CAPN1-224ENST00000533129 PDLIM4P50479 330 aa12.66□□□□□ -0.38
CAPN1-224ENST00000533129 CLN3Q13286 438 aa12.66□□□□□ -0.38
CAPN1-224ENST00000533129 ZNF726P1Q15940 193 aa12.66□□□□□ -0.38
CAPN1-224ENST00000533129 LCN15Q6UWW0 184 aa12.66□□□□□ -0.38
CAPN1-224ENST00000533129 OR1F12Q8NHA8 337 aa12.66□□□□□ -0.38
CAPN1-224ENST00000533129 SCGB1C1Q8TD33 95 aa12.66□□□□□ -0.38
CAPN1-224ENST00000533129 SPACA9Q96E40 222 aaPredicted RBP12.66□□□□□ -0.38
CAPN1-224ENST00000533129 ACY3Q96HD9 319 aa12.66□□□□□ -0.38
CAPN1-224ENST00000533129 RAB40CQ96S21 281 aa12.66□□□□□ -0.38
CAPN1-224ENST00000533129 NAT8Q9UHE5 227 aa12.66□□□□□ -0.38
CAPN1-224ENST00000533129 RTTNQ86VV8 2226 aa12.66□□□□□ -0.38
CAPN1-224ENST00000533129 KMT2EQ8IZD2 1858 aa12.66□□□□□ -0.38
CAPN1-224ENST00000533129 PIGBOS1A0A0B4J2F0 54 aa12.66□□□□□ -0.38
CAPN1-224ENST00000533129 FAM90A10PA6NDY2 464 aa12.66□□□□□ -0.38
CAPN1-224ENST00000533129 FAM90A18PA6NE21 464 aa12.66□□□□□ -0.38
CAPN1-224ENST00000533129 FAM90A16PA6NEW6 464 aa12.66□□□□□ -0.38
CAPN1-224ENST00000533129 FAM90A20PA6NIJ5 464 aa12.66□□□□□ -0.38
CAPN1-224ENST00000533129 FAM90A8PA6NJQ4 464 aa12.66□□□□□ -0.38
CAPN1-224ENST00000533129 FAM90A7PA6NKC0 464 aa12.66□□□□□ -0.38
CAPN1-224ENST00000533129 FAM90A22PA8MWA6 464 aa12.66□□□□□ -0.38
CAPN1-224ENST00000533129 FAM90A12PA8MX19 464 aa12.66□□□□□ -0.38
CAPN1-224ENST00000533129 FAM90A5PA8MXJ8 464 aa12.66□□□□□ -0.38
CAPN1-224ENST00000533129 FAM90A23PA8MXZ1 464 aa12.66□□□□□ -0.38
CAPN1-224ENST00000533129 SLC33A1O00400 549 aaPredicted RBP12.66□□□□□ -0.38
CAPN1-224ENST00000533129 TUSC2O75896 110 aa12.66□□□□□ -0.38
CAPN1-224ENST00000533129 NXPH3O95157 252 aa12.66□□□□□ -0.38
CAPN1-224ENST00000533129 SNRPCP09234 159 aaKnown RBP12.66□□□□□ -0.38
CAPN1-224ENST00000533129 FAM90A15PP0C7V4 464 aa12.66□□□□□ -0.38
CAPN1-224ENST00000533129 FAM90A13PP0C7W8 464 aa12.66□□□□□ -0.38
CAPN1-224ENST00000533129 FAM90A14PP0C7W9 464 aa12.66□□□□□ -0.38
CAPN1-224ENST00000533129 FAM90A24PP0C7X0 464 aa12.66□□□□□ -0.38
CAPN1-224ENST00000533129 SLC25A6P12236 298 aa12.66□□□□□ -0.38
CAPN1-224ENST00000533129 MDKP21741 143 aaPredicted RBP12.66□□□□□ -0.38
CAPN1-224ENST00000533129 PMS2P11Q13670 270 aa12.66□□□□□ -0.38
CAPN1-224ENST00000533129 SLC10A1Q14973 349 aa12.66□□□□□ -0.38
CAPN1-224ENST00000533129 EXTL1Q92935 676 aa12.66□□□□□ -0.38
CAPN1-224ENST00000533129 TECTBQ96PL2 329 aa12.66□□□□□ -0.38
CAPN1-224ENST00000533129 Q9N2K0 584 aa12.66□□□□□ -0.38
CAPN1-224ENST00000533129 GAB2Q9UQC2 676 aa12.66□□□□□ -0.38
CAPN1-224ENST00000533129 XKRY2A2RUG3 117 aa12.65□□□□□ -0.38
CAPN1-224ENST00000533129 DKK1O94907 266 aa12.65□□□□□ -0.38
CAPN1-224ENST00000533129 IL18BPO95998 194 aa12.65□□□□□ -0.38
CAPN1-224ENST00000533129 HLA-HP01893 362 aa12.65□□□□□ -0.38
CAPN1-224ENST00000533129 CD59P13987 128 aa12.65□□□□□ -0.38
CAPN1-224ENST00000533129 CYP2G1PQ6ZSU1 146 aa12.65□□□□□ -0.38
CAPN1-224ENST00000533129 ZNF295-AS1Q8N0V1 137 aa12.65□□□□□ -0.38
CAPN1-224ENST00000533129 GPR137CQ8N3F9 429 aa12.65□□□□□ -0.38
CAPN1-224ENST00000533129 ZNF845Q96IR2 970 aaPredicted RBP12.65□□□□□ -0.38
CAPN1-224ENST00000533129 HIST1H2AAQ96QV6 131 aa12.65□□□□□ -0.38
CAPN1-224ENST00000533129 RSG1Q9BU20 258 aa12.65□□□□□ -0.38
CAPN1-224ENST00000533129 OR14J1Q9UGF5 321 aa12.65□□□□□ -0.38
CAPN1-224ENST00000533129 BDP1A6H8Y1 2624 aa12.65□□□□□ -0.38
CAPN1-224ENST00000533129 IGKV1D-13A0A0B4J2D9 117 aa12.65□□□□□ -0.38
CAPN1-224ENST00000533129 IGKV1-13P0DP09 117 aa12.65□□□□□ -0.38
CAPN1-224ENST00000533129 PRSS12P56730 875 aa12.65□□□□□ -0.38
CAPN1-224ENST00000533129 KRTAP27-1Q3LI81 207 aa12.65□□□□□ -0.38
CAPN1-224ENST00000533129 NCR3LG1Q68D85 454 aa12.65□□□□□ -0.38
CAPN1-224ENST00000533129 ZNF774Q6NX45 483 aa12.65□□□□□ -0.38
CAPN1-224ENST00000533129 STRADBQ9C0K7 418 aa12.65□□□□□ -0.38
CAPN1-224ENST00000533129 AKIRIN1Q9H9L7 192 aaPredicted RBP12.65□□□□□ -0.38
CAPN1-224ENST00000533129 LOC102723996A0A087X1L8 192 aa12.64□□□□□ -0.39
CAPN1-224ENST00000533129 IGHV3-15A0A0B4J1V0 119 aa12.64□□□□□ -0.39
CAPN1-224ENST00000533129 hCG_38984A0A1B0GV85 526 aa12.64□□□□□ -0.39
CAPN1-224ENST00000533129 CEBPZOSA8MTT3 80 aa12.64□□□□□ -0.39
CAPN1-224ENST00000533129 CDX4O14627 284 aaPredicted RBP12.64□□□□□ -0.39
CAPN1-224ENST00000533129 CST2P09228 141 aa12.64□□□□□ -0.39
CAPN1-224ENST00000533129 SERF2P84101 59 aa12.64□□□□□ -0.39
CAPN1-224ENST00000533129 TMEM267Q0VDI3 215 aaPredicted RBP12.64□□□□□ -0.39
CAPN1-224ENST00000533129 PLCXD3Q63HM9 321 aa12.64□□□□□ -0.39
CAPN1-224ENST00000533129 C16orf82Q7Z2V1 217 aa12.64□□□□□ -0.39
CAPN1-224ENST00000533129 C17orf78Q8N4C9 275 aa12.64□□□□□ -0.39
CAPN1-224ENST00000533129 Q8NFD4 153 aa12.64□□□□□ -0.39
CAPN1-224ENST00000533129 ZNF837Q96EG3 531 aaPredicted RBP12.64□□□□□ -0.39
CAPN1-224ENST00000533129 RASL10BQ96S79 203 aa12.64□□□□□ -0.39
CAPN1-224ENST00000533129 GPHA2Q96T91 129 aa12.64□□□□□ -0.39
CAPN1-224ENST00000533129 VSIRQ9H7M9 311 aa12.64□□□□□ -0.39
CAPN1-224ENST00000533129 COL27A1Q8IZC6 1860 aaPredicted RBP12.64□□□□□ -0.39
CAPN1-224ENST00000533129 ASCC3Q8N3C0 2202 aaKnown RBP12.64□□□□□ -0.39
CAPN1-224ENST00000533129 OR6C6A6NF89 314 aa12.64□□□□□ -0.39
CAPN1-224ENST00000533129 CYTIPO60759 359 aa12.64□□□□□ -0.39
CAPN1-224ENST00000533129 NAPSAO96009 420 aa12.64□□□□□ -0.39
CAPN1-224ENST00000533129 RPS18P62269 152 aaKnown RBP12.64□□□□□ -0.39
CAPN1-224ENST00000533129 SSX7Q7RTT5 188 aa12.64□□□□□ -0.39
CAPN1-224ENST00000533129 CENPVQ7Z7K6 275 aaPredicted RBP12.64□□□□□ -0.39
CAPN1-224ENST00000533129 UCN2Q96RP3 112 aa12.64□□□□□ -0.39
CAPN1-224ENST00000533129 WASF3Q9UPY6 502 aa12.64□□□□□ -0.39
CAPN1-224ENST00000533129 LAMP3Q9UQV4 416 aa12.64□□□□□ -0.39
CAPN1-224ENST00000533129 KIAA1324LA8MWY0 1029 aaPredicted RBP12.64□□□□□ -0.39
CAPN1-224ENST00000533129 PPP5D1E7EU14 171 aa12.64□□□□□ -0.39
CAPN1-224ENST00000533129 H3BP45 60 aa12.64□□□□□ -0.39
CAPN1-224ENST00000533129 CNOT4O95628 575 aaKnown RBP12.64□□□□□ -0.39
CAPN1-224ENST00000533129 CD55P08174 381 aa12.64□□□□□ -0.39
CAPN1-224ENST00000533129 JMJD7P0C870 316 aa12.64□□□□□ -0.39
CAPN1-224ENST00000533129 MDH2P40926 338 aaKnown RBP12.64□□□□□ -0.39
CAPN1-224ENST00000533129 NUBP1P53384 320 aa12.64□□□□□ -0.39
CAPN1-224ENST00000533129 FGF8P55075 233 aaPredicted RBP12.64□□□□□ -0.39
CAPN1-224ENST00000533129 HERPUD1Q15011 391 aa12.64□□□□□ -0.39
CAPN1-224ENST00000533129 ADIRFQ15847 76 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 121 ms