RNA–Protein interactions for RNA: ENST00000533018.1

PCF11-206, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

TSL 3

Gene PCF11, Length 580 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-206ENST00000533018 TRBV5-5A0A0J9YX44 114 aa14.05□□□□□ -0.16
PCF11-206ENST00000533018 SPINT2O43291 252 aa14.05□□□□□ -0.16
PCF11-206ENST00000533018 MAS1P04201 325 aa14.05□□□□□ -0.16
PCF11-206ENST00000533018 EBI3Q14213 229 aa14.05□□□□□ -0.16
PCF11-206ENST00000533018 TTC23Q5W5X9 447 aa14.05□□□□□ -0.16
PCF11-206ENST00000533018 DMKNQ6E0U4 476 aaPredicted RBP14.05□□□□□ -0.16
PCF11-206ENST00000533018 TEX38Q6PEX7 206 aa14.05□□□□□ -0.16
PCF11-206ENST00000533018 TGIF2LXQ8IUE1 241 aa14.05□□□□□ -0.16
PCF11-206ENST00000533018 IZUMO1Q8IYV9 350 aa14.05□□□□□ -0.16
PCF11-206ENST00000533018 LINC00311Q8N616 119 aa14.05□□□□□ -0.16
PCF11-206ENST00000533018 SETD9Q8NE22 299 aa14.05□□□□□ -0.16
PCF11-206ENST00000533018 OR10V1Q8NGI7 309 aa14.05□□□□□ -0.16
PCF11-206ENST00000533018 OR4K15Q8NH41 348 aa14.05□□□□□ -0.16
PCF11-206ENST00000533018 DUX3Q96PT4 197 aa14.05□□□□□ -0.16
PCF11-206ENST00000533018 OR14A2Q96R54 314 aa14.05□□□□□ -0.16
PCF11-206ENST00000533018 RASL11BQ9BPW5 248 aa14.05□□□□□ -0.16
PCF11-206ENST00000533018 MCRIP2Q9BUT9 160 aaKnown RBP14.05□□□□□ -0.16
PCF11-206ENST00000533018 RAB9BQ9NP90 201 aa14.05□□□□□ -0.16
PCF11-206ENST00000533018 TRAV8-7A0A075B6U6 113 aa14.04□□□□□ -0.16
PCF11-206ENST00000533018 AP4M1O00189 453 aa14.04□□□□□ -0.16
PCF11-206ENST00000533018 MOSP00540 346 aa14.04□□□□□ -0.16
PCF11-206ENST00000533018 SLC6A1P30531 599 aa14.04□□□□□ -0.16
PCF11-206ENST00000533018 MYCNOSP40205 109 aa14.04□□□□□ -0.16
PCF11-206ENST00000533018 GPR12P47775 334 aa14.04□□□□□ -0.16
PCF11-206ENST00000533018 AWAT2Q6E213 333 aa14.04□□□□□ -0.16
PCF11-206ENST00000533018 RAB12Q6IQ22 244 aa14.04□□□□□ -0.16
PCF11-206ENST00000533018 UNQ9370/PRO34162Q6UXP9 181 aa14.04□□□□□ -0.16
PCF11-206ENST00000533018 ZNF695Q8IW36 515 aa14.04□□□□□ -0.16
PCF11-206ENST00000533018 C8orf31Q8N9H6 132 aa14.04□□□□□ -0.16
PCF11-206ENST00000533018 GON7Q9BXV9 100 aa14.04□□□□□ -0.16
PCF11-206ENST00000533018 ABCG5Q9H222 651 aa14.04□□□□□ -0.16
PCF11-206ENST00000533018 BANF2Q9H503 90 aa14.04□□□□□ -0.16
PCF11-206ENST00000533018 LIN7CQ9NUP9 197 aaKnown RBP14.04□□□□□ -0.16
PCF11-206ENST00000533018 PEX16Q9Y5Y5 336 aa14.04□□□□□ -0.16
PCF11-206ENST00000533018 C12orf77C9JDV5 145 aa14.03□□□□□ -0.16
PCF11-206ENST00000533018 SLC31A2O15432 143 aa14.03□□□□□ -0.16
PCF11-206ENST00000533018 GPX5O75715 221 aa14.03□□□□□ -0.16
PCF11-206ENST00000533018 CD1BP29016 333 aa14.03□□□□□ -0.16
PCF11-206ENST00000533018 RPS11P62280 158 aaKnown RBP eCLIP14.03□□□□□ -0.16
PCF11-206ENST00000533018 EGFEM1PQ0D2K5 195 aa14.03□□□□□ -0.16
PCF11-206ENST00000533018 ST3GAL4Q11206 333 aa14.03□□□□□ -0.16
PCF11-206ENST00000533018 PNLIPRP3Q17RR3 467 aa14.03□□□□□ -0.16
PCF11-206ENST00000533018 VAX1Q5SQQ9 334 aa14.03□□□□□ -0.16
PCF11-206ENST00000533018 C6orf183Q5T699 404 aa14.03□□□□□ -0.16
PCF11-206ENST00000533018 Q8N9W7 124 aa14.03□□□□□ -0.16
PCF11-206ENST00000533018 GGHQ92820 318 aa14.03□□□□□ -0.16
PCF11-206ENST00000533018 PGLYRP3Q96LB9 341 aa14.03□□□□□ -0.16
PCF11-206ENST00000533018 SELENOIQ9C0D9 397 aa14.03□□□□□ -0.16
PCF11-206ENST00000533018 DNAH9Q9NYC9 4486 aa14.02□□□□□ -0.16
PCF11-206ENST00000533018 UBE2QL1A1L167 161 aa14.02□□□□□ -0.17
PCF11-206ENST00000533018 ZNF736B4DX44 427 aaPredicted RBP14.02□□□□□ -0.17
PCF11-206ENST00000533018 RRP9O43818 475 aaKnown RBP14.02□□□□□ -0.17
PCF11-206ENST00000533018 CRTAPO75718 401 aaPredicted RBP14.02□□□□□ -0.17
PCF11-206ENST00000533018 RPLP1P05386 114 aaKnown RBP14.02□□□□□ -0.17
PCF11-206ENST00000533018 FSTP19883 344 aa14.02□□□□□ -0.17
PCF11-206ENST00000533018 CAPGP40121 348 aa14.02□□□□□ -0.17
PCF11-206ENST00000533018 TAS2R43P59537 309 aa14.02□□□□□ -0.17
PCF11-206ENST00000533018 CD69Q07108 199 aa14.02□□□□□ -0.17
PCF11-206ENST00000533018 CXorf66Q5JRM2 361 aaPredicted RBP14.02□□□□□ -0.17
PCF11-206ENST00000533018 DHRSXQ8N5I4 330 aa14.02□□□□□ -0.17
PCF11-206ENST00000533018 Q8N6K4 173 aa14.02□□□□□ -0.17
PCF11-206ENST00000533018 OR1L1Q8NH94 360 aa14.02□□□□□ -0.17
PCF11-206ENST00000533018 ST6GALNAC6Q969X2 333 aa14.02□□□□□ -0.17
PCF11-206ENST00000533018 MRPS24Q96EL2 167 aaKnown RBP14.02□□□□□ -0.17
PCF11-206ENST00000533018 S1PR3Q99500 378 aa14.02□□□□□ -0.17
PCF11-206ENST00000533018 CCL24O00175 119 aa14.01□□□□□ -0.17
PCF11-206ENST00000533018 MYL12BO14950 172 aa14.01□□□□□ -0.17
PCF11-206ENST00000533018 TXNL1O43396 289 aa14.01□□□□□ -0.17
PCF11-206ENST00000533018 HBZP02008 142 aa14.01□□□□□ -0.17
PCF11-206ENST00000533018 MGMTP16455 207 aa14.01□□□□□ -0.17
PCF11-206ENST00000533018 RCC1P18754 421 aaPredicted RBP14.01□□□□□ -0.17
PCF11-206ENST00000533018 VHLP40337 213 aa14.01□□□□□ -0.17
PCF11-206ENST00000533018 ZNF134P52741 427 aa14.01□□□□□ -0.17
PCF11-206ENST00000533018 GPR50Q13585 617 aa14.01□□□□□ -0.17
PCF11-206ENST00000533018 Q3ZCU0 254 aa14.01□□□□□ -0.17
PCF11-206ENST00000533018 CT45A1Q5HYN5 189 aa14.01□□□□□ -0.17
PCF11-206ENST00000533018 LCNL1Q6ZST4 164 aa14.01□□□□□ -0.17
PCF11-206ENST00000533018 SLC25A48Q6ZT89 311 aaKnown RBP14.01□□□□□ -0.17
PCF11-206ENST00000533018 TMEM104Q8NE00 496 aa14.01□□□□□ -0.17
PCF11-206ENST00000533018 CT45A3Q8NHU0 189 aa14.01□□□□□ -0.17
PCF11-206ENST00000533018 RBMXL1Q96E39 390 aaKnown RBP14.01□□□□□ -0.17
PCF11-206ENST00000533018 RAX2Q96IS3 184 aa14.01□□□□□ -0.17
PCF11-206ENST00000533018 P2RX4Q99571 388 aa14.01□□□□□ -0.17
PCF11-206ENST00000533018 DCLRE1BQ9H816 532 aa14.01□□□□□ -0.17
PCF11-206ENST00000533018 PLSCR3Q9NRY6 295 aa14.01□□□□□ -0.17
PCF11-206ENST00000533018 KCNIP1Q9NZI2 227 aa14.01□□□□□ -0.17
PCF11-206ENST00000533018 RCC2Q9P258 522 aaKnown RBP14.01□□□□□ -0.17
PCF11-206ENST00000533018 TRBV5-7A0A0A0MS05 114 aa14□□□□□ -0.17
PCF11-206ENST00000533018 EFCAB10A6NFE3 127 aa14□□□□□ -0.17
PCF11-206ENST00000533018 CELP19835 753 aa14□□□□□ -0.17
PCF11-206ENST00000533018 FUT3P21217 361 aa14□□□□□ -0.17
PCF11-206ENST00000533018 VDAC1P21796 283 aa14□□□□□ -0.17
PCF11-206ENST00000533018 SOX6P35712 828 aa14□□□□□ -0.17
PCF11-206ENST00000533018 F2RL1P55085 397 aa14□□□□□ -0.17
PCF11-206ENST00000533018 DOC2BQ14184 412 aa14□□□□□ -0.17
PCF11-206ENST00000533018 C11orf87Q6NUJ2 197 aa14□□□□□ -0.17
PCF11-206ENST00000533018 TRAT1Q6PIZ9 186 aa14□□□□□ -0.17
PCF11-206ENST00000533018 OR8H1Q8NGG4 311 aa14□□□□□ -0.17
PCF11-206ENST00000533018 TFAP2CQ92754 450 aa14□□□□□ -0.17
PCF11-206ENST00000533018 FAM46BQ96A09 425 aa14□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 71 ms