RNA–Protein interactions for RNA: ENST00000533012.1

TRAPPC4-211, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 817 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-211ENST00000533012 MBNL3Q9NUK0 354 aaKnown RBP9.2□□□□□ -0.94
TRAPPC4-211ENST00000533012 IDI2-AS1Q9NZ38 188 aa9.2□□□□□ -0.94
TRAPPC4-211ENST00000533012 MGAT4AQ9UM21 535 aa9.2□□□□□ -0.94
TRAPPC4-211ENST00000533012 SESN1Q9Y6P5 492 aa9.2□□□□□ -0.94
TRAPPC4-211ENST00000533012 TRBV6-6A0A0A6YYG2 114 aa9.19□□□□□ -0.94
TRAPPC4-211ENST00000533012 IGHV1-69DA0A0B4J2H0 117 aa9.19□□□□□ -0.94
TRAPPC4-211ENST00000533012 A0A1B0GVG6 124 aa9.19□□□□□ -0.94
TRAPPC4-211ENST00000533012 FAM25AB3EWG3 89 aa9.19□□□□□ -0.94
TRAPPC4-211ENST00000533012 FAM25CB3EWG5 89 aa9.19□□□□□ -0.94
TRAPPC4-211ENST00000533012 FAM25GB3EWG6 89 aa9.19□□□□□ -0.94
TRAPPC4-211ENST00000533012 C12orf77C9JDV5 145 aa9.19□□□□□ -0.94
TRAPPC4-211ENST00000533012 RNASEK-C17orf49H0YIS7 233 aa9.19□□□□□ -0.94
TRAPPC4-211ENST00000533012 XRCC3O43542 346 aa9.19□□□□□ -0.94
TRAPPC4-211ENST00000533012 HPGDSO60760 199 aa9.19□□□□□ -0.94
TRAPPC4-211ENST00000533012 FSHBP01225 129 aa9.19□□□□□ -0.94
TRAPPC4-211ENST00000533012 IGHV1-69P01742 117 aa9.19□□□□□ -0.94
TRAPPC4-211ENST00000533012 FAM157CP0CG43 387 aa9.19□□□□□ -0.94
TRAPPC4-211ENST00000533012 HOXB4P17483 251 aaPredicted RBP9.19□□□□□ -0.94
TRAPPC4-211ENST00000533012 SSTR5P35346 364 aa9.19□□□□□ -0.94
TRAPPC4-211ENST00000533012 MNDAP41218 407 aa9.19□□□□□ -0.94
TRAPPC4-211ENST00000533012 INPP1P49441 399 aa9.19□□□□□ -0.94
TRAPPC4-211ENST00000533012 UBE2E1P51965 193 aa9.19□□□□□ -0.94
TRAPPC4-211ENST00000533012 DLX1P56177 255 aa9.19□□□□□ -0.94
TRAPPC4-211ENST00000533012 PITPNAQ00169 270 aa9.19□□□□□ -0.94
TRAPPC4-211ENST00000533012 PRB3Q04118 309 aaPredicted RBP9.19□□□□□ -0.94
TRAPPC4-211ENST00000533012 PNLIPRP3Q17RR3 467 aa9.19□□□□□ -0.94
TRAPPC4-211ENST00000533012 ZNF260Q3ZCT1 412 aa9.19□□□□□ -0.94
TRAPPC4-211ENST00000533012 PRAMEF5Q5TYX0 476 aa9.19□□□□□ -0.94
TRAPPC4-211ENST00000533012 HACD4Q5VWC8 232 aa9.19□□□□□ -0.94
TRAPPC4-211ENST00000533012 OLFML2AQ68BL7 652 aa9.19□□□□□ -0.94
TRAPPC4-211ENST00000533012 PRR18Q8N4B5 295 aa9.19□□□□□ -0.94
TRAPPC4-211ENST00000533012 HDHD3Q9BSH5 251 aaPredicted RBP9.19□□□□□ -0.94
TRAPPC4-211ENST00000533012 TMEM133Q9H2Q1 129 aa9.19□□□□□ -0.94
TRAPPC4-211ENST00000533012 OCEL1Q9H607 264 aa9.19□□□□□ -0.94
TRAPPC4-211ENST00000533012 TAF9BQ9HBM6 251 aa9.19□□□□□ -0.94
TRAPPC4-211ENST00000533012 ARHGAP32A7KAX9 2087 aa9.19□□□□□ -0.94
TRAPPC4-211ENST00000533012 ABCA2Q9BZC7 2435 aa9.19□□□□□ -0.94
TRAPPC4-211ENST00000533012 SVEP1Q4LDE5 3571 aa9.18□□□□□ -0.94
TRAPPC4-211ENST00000533012 hCG_2014768A0A024R1R8 64 aa9.18□□□□□ -0.94
TRAPPC4-211ENST00000533012 C15orf65H3BRN8 121 aa9.18□□□□□ -0.94
TRAPPC4-211ENST00000533012 CTDSP2O14595 271 aa9.18□□□□□ -0.94
TRAPPC4-211ENST00000533012 MMP23AO75900 390 aa9.18□□□□□ -0.94
TRAPPC4-211ENST00000533012 EIF4EP06730 217 aaKnown RBP9.18□□□□□ -0.94
TRAPPC4-211ENST00000533012 MELTFP08582 738 aa9.18□□□□□ -0.94
TRAPPC4-211ENST00000533012 ELK1P19419 428 aa9.18□□□□□ -0.94
TRAPPC4-211ENST00000533012 EPHA1P21709 976 aa9.18□□□□□ -0.94
TRAPPC4-211ENST00000533012 COX7A1P24310 79 aa9.18□□□□□ -0.94
TRAPPC4-211ENST00000533012 NFYBP25208 207 aa9.18□□□□□ -0.94
TRAPPC4-211ENST00000533012 HIVEP2P31629 2446 aa9.18□□□□□ -0.94
TRAPPC4-211ENST00000533012 BCAP31P51572 246 aa9.18□□□□□ -0.94
TRAPPC4-211ENST00000533012 LGALS4P56470 323 aa9.18□□□□□ -0.94
TRAPPC4-211ENST00000533012 GNG2P59768 71 aa9.18□□□□□ -0.94
TRAPPC4-211ENST00000533012 KLRD1Q13241 179 aa9.18□□□□□ -0.94
TRAPPC4-211ENST00000533012 LTC4SQ16873 150 aa9.18□□□□□ -0.94
TRAPPC4-211ENST00000533012 TMEM69Q5SWH9 247 aa9.18□□□□□ -0.94
TRAPPC4-211ENST00000533012 MZT2BQ6NZ67 158 aa9.18□□□□□ -0.94
TRAPPC4-211ENST00000533012 ZNF880Q6PDB4 577 aa9.18□□□□□ -0.94
TRAPPC4-211ENST00000533012 BRD3OSQ6XYD6 125 aa9.18□□□□□ -0.94
TRAPPC4-211ENST00000533012 MOB1BQ7L9L4 216 aa9.18□□□□□ -0.94
TRAPPC4-211ENST00000533012 ABHD12Q8N2K0 398 aa9.18□□□□□ -0.94
TRAPPC4-211ENST00000533012 PNKDQ8N490 385 aa9.18□□□□□ -0.94
TRAPPC4-211ENST00000533012 DTX3Q8N9I9 347 aa9.18□□□□□ -0.94
TRAPPC4-211ENST00000533012 OR52M1Q8NGK5 317 aa9.18□□□□□ -0.94
TRAPPC4-211ENST00000533012 GALMQ96C23 342 aa9.18□□□□□ -0.94
TRAPPC4-211ENST00000533012 SUCNR1Q9BXA5 334 aa9.18□□□□□ -0.94
TRAPPC4-211ENST00000533012 CLEC7AQ9BXN2 247 aa9.18□□□□□ -0.94
TRAPPC4-211ENST00000533012 AUNIPQ9H7T9 357 aa9.18□□□□□ -0.94
TRAPPC4-211ENST00000533012 Q9N2K0 584 aa9.18□□□□□ -0.94
TRAPPC4-211ENST00000533012 ZNF69Q9UC07 566 aa9.18□□□□□ -0.94
TRAPPC4-211ENST00000533012 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP9.17□□□□□ -0.944e-7■■■■□ 19.9
TRAPPC4-211ENST00000533012 A0A1W2PRD5 423 aa9.17□□□□□ -0.94
TRAPPC4-211ENST00000533012 A0A1W2PRF3 423 aa9.17□□□□□ -0.94
TRAPPC4-211ENST00000533012 A0A1W2PRM7 423 aa9.17□□□□□ -0.94
TRAPPC4-211ENST00000533012 TMEM235A6NFC5 223 aa9.17□□□□□ -0.94
TRAPPC4-211ENST00000533012 F2RL2O00254 374 aa9.17□□□□□ -0.94
TRAPPC4-211ENST00000533012 SDCBPO00560 298 aaPredicted RBP9.17□□□□□ -0.94
TRAPPC4-211ENST00000533012 TOR1AO14656 332 aa9.17□□□□□ -0.94
TRAPPC4-211ENST00000533012 NPFFO15130 113 aa9.17□□□□□ -0.94
TRAPPC4-211ENST00000533012 HBZP02008 142 aa9.17□□□□□ -0.94
TRAPPC4-211ENST00000533012 GDNFP39905 211 aa9.17□□□□□ -0.94
TRAPPC4-211ENST00000533012 PRRX1P54821 245 aa9.17□□□□□ -0.94
TRAPPC4-211ENST00000533012 SRSF7Q16629 238 aaKnown RBP eCLIP9.17□□□□□ -0.94
TRAPPC4-211ENST00000533012 TMEM30BQ3MIR4 351 aa9.17□□□□□ -0.94
TRAPPC4-211ENST00000533012 MIDNQ504T8 468 aa9.17□□□□□ -0.94
TRAPPC4-211ENST00000533012 PYDC2Q56P42 97 aa9.17□□□□□ -0.94
TRAPPC4-211ENST00000533012 TRIQKQ629K1 86 aa9.17□□□□□ -0.94
TRAPPC4-211ENST00000533012 STEAP3Q658P3 488 aa9.17□□□□□ -0.94
TRAPPC4-211ENST00000533012 HCP5Q6MZN7 132 aa9.17□□□□□ -0.94
TRAPPC4-211ENST00000533012 LAX1Q8IWV1 398 aa9.17□□□□□ -0.94
TRAPPC4-211ENST00000533012 IZUMO1Q8IYV9 350 aa9.17□□□□□ -0.94
TRAPPC4-211ENST00000533012 OR11H6Q8NGC7 330 aa9.17□□□□□ -0.94
TRAPPC4-211ENST00000533012 UBALD1Q8TB05 177 aa9.17□□□□□ -0.94
TRAPPC4-211ENST00000533012 C15orf40Q8WUR7 153 aa9.17□□□□□ -0.94
TRAPPC4-211ENST00000533012 C22orf15Q8WYQ4 148 aa9.17□□□□□ -0.94
TRAPPC4-211ENST00000533012 KIRREL1Q96J84 757 aa9.17□□□□□ -0.94
TRAPPC4-211ENST00000533012 ST6GALNAC5Q9BVH7 336 aa9.17□□□□□ -0.94
TRAPPC4-211ENST00000533012 OR2S2Q9NQN1 319 aa9.17□□□□□ -0.94
TRAPPC4-211ENST00000533012 ELF5Q9UKW6 265 aaPredicted RBP9.17□□□□□ -0.94
TRAPPC4-211ENST00000533012 MRPS7Q9Y2R9 242 aaKnown RBP9.17□□□□□ -0.94
TRAPPC4-211ENST00000533012 DOCK11Q5JSL3 2073 aa9.17□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms