RNA–Protein interactions for RNA: ENST00000533001.1

KNL1-211, Transcript of kinetochore scaffold 1, humanhuman

TSL 1 (best)

Gene KNL1, Length 5,923 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNL1-211ENST00000533001 TSPAN4O14817 238 aa1.12□□□□□ -2.23
KNL1-211ENST00000533001 SSX5O60225 188 aa1.12□□□□□ -2.23
KNL1-211ENST00000533001 NDUFB8O95169 186 aa1.12□□□□□ -2.23
KNL1-211ENST00000533001 SERPINA1P01009 418 aa1.12□□□□□ -2.23
KNL1-211ENST00000533001 ALPLP05186 524 aa1.12□□□□□ -2.23
KNL1-211ENST00000533001 LINC00694P0DN24 101 aa1.12□□□□□ -2.23
KNL1-211ENST00000533001 PIPP12273 146 aaPredicted RBP1.12□□□□□ -2.23
KNL1-211ENST00000533001 PSMB6P28072 239 aa1.12□□□□□ -2.23
KNL1-211ENST00000533001 APLNRP35414 380 aa1.12□□□□□ -2.23
KNL1-211ENST00000533001 REG1BP48304 166 aa1.12□□□□□ -2.23
KNL1-211ENST00000533001 GTF2A1P52655 376 aaPredicted RBP1.12□□□□□ -2.23
KNL1-211ENST00000533001 OR12D2P58182 307 aa1.12□□□□□ -2.23
KNL1-211ENST00000533001 GNA13Q14344 377 aa1.12□□□□□ -2.23
KNL1-211ENST00000533001 MOGQ16653 247 aa1.12□□□□□ -2.23
KNL1-211ENST00000533001 MICAQ29983 383 aa1.12□□□□□ -2.23
KNL1-211ENST00000533001 MOGAT2Q3SYC2 334 aa1.12□□□□□ -2.23
KNL1-211ENST00000533001 RPL39P5Q59GN2 51 aa1.12□□□□□ -2.23
KNL1-211ENST00000533001 ODF2Q5BJF6 829 aa1.12□□□□□ -2.23
KNL1-211ENST00000533001 MORN3Q6PF18 240 aaPredicted RBP1.12□□□□□ -2.23
KNL1-211ENST00000533001 LINC00336Q6ZUF6 198 aa1.12□□□□□ -2.23
KNL1-211ENST00000533001 KRTAP7-1Q8IUC3 87 aa1.12□□□□□ -2.23
KNL1-211ENST00000533001 C1orf87Q8N0U7 546 aa1.12□□□□□ -2.23
KNL1-211ENST00000533001 POM121L12Q8N7R1 296 aa1.12□□□□□ -2.23
KNL1-211ENST00000533001 CSNK2A3Q8NEV1 391 aa1.12□□□□□ -2.23
KNL1-211ENST00000533001 CHPT1Q8WUD6 406 aa1.12□□□□□ -2.23
KNL1-211ENST00000533001 CANT1Q8WVQ1 401 aa1.12□□□□□ -2.23
KNL1-211ENST00000533001 CLPTM1LQ96KA5 538 aa1.12□□□□□ -2.23
KNL1-211ENST00000533001 CLUHP3Q96NS8 147 aa1.12□□□□□ -2.23
KNL1-211ENST00000533001 KCNS3Q9BQ31 491 aa1.12□□□□□ -2.23
KNL1-211ENST00000533001 SPATA25Q9BR10 227 aa1.12□□□□□ -2.23
KNL1-211ENST00000533001 CHID1Q9BWS9 393 aa1.12□□□□□ -2.23
KNL1-211ENST00000533001 LPAR5Q9H1C0 372 aa1.12□□□□□ -2.23
KNL1-211ENST00000533001 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP1.12□□□□□ -2.23
KNL1-211ENST00000533001 NOL12Q9UGY1 213 aaKnown RBP eCLIP1.12□□□□□ -2.23
KNL1-211ENST00000533001 V9GYY5 206 aaPredicted RBP1.12□□□□□ -2.23
KNL1-211ENST00000533001 TRAV3A0A0B4J244 114 aa1.12□□□□□ -2.23
KNL1-211ENST00000533001 KIR2DL5BA0A0G2JN68 375 aa1.12□□□□□ -2.23
KNL1-211ENST00000533001 KIR2DL5BA0A0G2JPC4 375 aa1.12□□□□□ -2.23
KNL1-211ENST00000533001 TCRBV4S1A1TA0A5B7 111 aa1.12□□□□□ -2.23
KNL1-211ENST00000533001 ELOVL7A1L3X0 281 aa1.12□□□□□ -2.23
KNL1-211ENST00000533001 ISPDA4D126 451 aa1.12□□□□□ -2.23
KNL1-211ENST00000533001 I3L2K1 104 aa1.12□□□□□ -2.23
KNL1-211ENST00000533001 GEMIN2O14893 280 aaKnown RBP1.12□□□□□ -2.23
KNL1-211ENST00000533001 CFLARO15519 480 aa1.12□□□□□ -2.23
KNL1-211ENST00000533001 FARS2O95363 451 aaKnown RBP1.12□□□□□ -2.23
KNL1-211ENST00000533001 HAND1O96004 215 aa1.12□□□□□ -2.23
KNL1-211ENST00000533001 CYB5AP00167 134 aa1.12□□□□□ -2.23
KNL1-211ENST00000533001 SOAT1P35610 550 aa1.12□□□□□ -2.23
KNL1-211ENST00000533001 HAMPP81172 84 aa1.12□□□□□ -2.23
KNL1-211ENST00000533001 KIR3DS1Q14943 382 aa1.12□□□□□ -2.23
KNL1-211ENST00000533001 SLC36A3Q495N2 470 aa1.12□□□□□ -2.23
KNL1-211ENST00000533001 SNX32Q86XE0 403 aa1.12□□□□□ -2.23
KNL1-211ENST00000533001 KIR2DL5AQ8N109 375 aa1.12□□□□□ -2.23
KNL1-211ENST00000533001 OR13C5Q8NGS8 318 aa1.12□□□□□ -2.23
KNL1-211ENST00000533001 KIR2DL5BQ8NHK3 375 aa1.12□□□□□ -2.23
KNL1-211ENST00000533001 RHOXF1Q8NHV9 184 aa1.12□□□□□ -2.23
KNL1-211ENST00000533001 HRASLS5Q96KN8 279 aa1.12□□□□□ -2.23
KNL1-211ENST00000533001 ZNF184Q99676 751 aaPredicted RBP1.12□□□□□ -2.23
KNL1-211ENST00000533001 YIPF3Q9GZM5 350 aa1.12□□□□□ -2.23
KNL1-211ENST00000533001 NEK6Q9HC98 313 aa1.12□□□□□ -2.23
KNL1-211ENST00000533001 CLEC5AQ9NY25 188 aa1.12□□□□□ -2.23
KNL1-211ENST00000533001 STX18Q9P2W9 335 aaKnown RBP1.12□□□□□ -2.23
KNL1-211ENST00000533001 RENP00797 406 aa1.12□□□□□ -2.23
KNL1-211ENST00000533001 CD3GP09693 182 aa1.12□□□□□ -2.23
KNL1-211ENST00000533001 RRM2P31350 389 aa1.12□□□□□ -2.23
KNL1-211ENST00000533001 RBM11P57052 281 aaKnown RBP1.12□□□□□ -2.23
KNL1-211ENST00000533001 PTGES3Q15185 160 aaKnown RBP1.12□□□□□ -2.23
KNL1-211ENST00000533001 TMEM30BQ3MIR4 351 aa1.12□□□□□ -2.23
KNL1-211ENST00000533001 SLC22A6Q4U2R8 563 aa1.12□□□□□ -2.23
KNL1-211ENST00000533001 ATAD3BQ5T9A4 648 aa1.12□□□□□ -2.23
KNL1-211ENST00000533001 ZNF554Q86TJ5 538 aa1.12□□□□□ -2.23
KNL1-211ENST00000533001 SATL1Q86VE3 508 aa1.12□□□□□ -2.23
KNL1-211ENST00000533001 DNAJC30Q96LL9 226 aa1.12□□□□□ -2.23
KNL1-211ENST00000533001 FAM19A4Q96LR4 140 aa1.12□□□□□ -2.23
KNL1-211ENST00000533001 RBP7Q96R05 134 aa1.12□□□□□ -2.23
KNL1-211ENST00000533001 HDHD3Q9BSH5 251 aaPredicted RBP1.12□□□□□ -2.23
KNL1-211ENST00000533001 UPK3BQ9BT76 320 aa1.12□□□□□ -2.23
KNL1-211ENST00000533001 ST6GALNAC5Q9BVH7 336 aa1.12□□□□□ -2.23
KNL1-211ENST00000533001 PLEKHA3Q9HB20 300 aa1.12□□□□□ -2.23
KNL1-211ENST00000533001 SCRT2Q9NQ03 307 aa1.12□□□□□ -2.23
KNL1-211ENST00000533001 SELENOKQ9Y6D0 94 aa1.12□□□□□ -2.23
KNL1-211ENST00000533001 R4GMQ9 66 aa1.12□□□□□ -2.23
KNL1-211ENST00000533001 MFNGO00587 321 aa1.11□□□□□ -2.23
KNL1-211ENST00000533001 OR2A4O95047 310 aa1.11□□□□□ -2.23
KNL1-211ENST00000533001 PTHP01270 115 aa1.11□□□□□ -2.23
KNL1-211ENST00000533001 SLPIP03973 132 aa1.11□□□□□ -2.23
KNL1-211ENST00000533001 H1F0P07305 194 aaKnown RBP1.11□□□□□ -2.23
KNL1-211ENST00000533001 CD33P20138 364 aa1.11□□□□□ -2.23
KNL1-211ENST00000533001 PEX2P28328 305 aa1.11□□□□□ -2.23
KNL1-211ENST00000533001 DUTP33316 252 aaKnown RBP1.11□□□□□ -2.23
KNL1-211ENST00000533001 VDAC2P45880 294 aaPredicted RBP1.11□□□□□ -2.23
KNL1-211ENST00000533001 GRB2P62993 217 aaKnown RBP1.11□□□□□ -2.23
KNL1-211ENST00000533001 CKAP4Q07065 602 aaKnown RBP1.11□□□□□ -2.23
KNL1-211ENST00000533001 KISS1Q15726 138 aa1.11□□□□□ -2.23
KNL1-211ENST00000533001 Q5VSD8 79 aa1.11□□□□□ -2.23
KNL1-211ENST00000533001 KRTAP5-11Q6L8G4 156 aa1.11□□□□□ -2.23
KNL1-211ENST00000533001 TMEM53Q6P2H8 277 aa1.11□□□□□ -2.23
KNL1-211ENST00000533001 Q9H3A6 140 aa1.11□□□□□ -2.23
KNL1-211ENST00000533001 TMEM27Q9HBJ8 222 aa1.11□□□□□ -2.23
KNL1-211ENST00000533001 ACTR3BQ9P1U1 418 aa1.11□□□□□ -2.23
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms