RNA–Protein interactions for RNA: ENST00000532918.4

COLCA1-203, Transcript of colorectal cancer associated 1, humanhuman

TSL 1 (best)

Gene COLCA1, Length 5,366 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA1-203ENST00000532918 TMEM30BQ3MIR4 351 aa9.34□□□□□ -0.91
COLCA1-203ENST00000532918 LIAT1Q6ZQX7 453 aa9.34□□□□□ -0.91
COLCA1-203ENST00000532918 GLCCI1Q86VQ1 547 aa9.34□□□□□ -0.91
COLCA1-203ENST00000532918 FAM219AQ8IW50 185 aa9.34□□□□□ -0.91
COLCA1-203ENST00000532918 MUC15Q8N387 334 aa9.34□□□□□ -0.91
COLCA1-203ENST00000532918 FAM210BQ96KR6 192 aa9.34□□□□□ -0.91
COLCA1-203ENST00000532918 SPSB2Q99619 263 aa9.34□□□□□ -0.91
COLCA1-203ENST00000532918 XIRP1Q702N8 1843 aaKnown RBP9.34□□□□□ -0.91
COLCA1-203ENST00000532918 ACAA2P42765 397 aaKnown RBP9.34□□□□□ -0.91
COLCA1-203ENST00000532918 PCSK4Q6UW60 755 aa9.34□□□□□ -0.91
COLCA1-203ENST00000532918 ITLN1Q8WWA0 313 aa9.34□□□□□ -0.91
COLCA1-203ENST00000532918 JMJD8Q96S16 334 aa9.34□□□□□ -0.91
COLCA1-203ENST00000532918 IGHV3-13P01766 116 aa9.34□□□□□ -0.91
COLCA1-203ENST00000532918 IGHV3-7P01780 117 aa9.34□□□□□ -0.91
COLCA1-203ENST00000532918 LOXL3P58215 753 aa9.34□□□□□ -0.91
COLCA1-203ENST00000532918 OR8G5Q8NG78 346 aa9.34□□□□□ -0.91
COLCA1-203ENST00000532918 OR10A7Q8NGE5 316 aa9.34□□□□□ -0.91
COLCA1-203ENST00000532918 SNX22Q96L94 193 aa9.34□□□□□ -0.91
COLCA1-203ENST00000532918 CCL13Q99616 98 aa9.34□□□□□ -0.91
COLCA1-203ENST00000532918 PRSS50Q9UI38 385 aa9.34□□□□□ -0.91
COLCA1-203ENST00000532918 A0A1W2PS18 150 aa9.34□□□□□ -0.91
COLCA1-203ENST00000532918 GEMIN2O14893 280 aaKnown RBP9.34□□□□□ -0.91
COLCA1-203ENST00000532918 HIST1H1EP10412 219 aaKnown RBP9.34□□□□□ -0.91
COLCA1-203ENST00000532918 ELOBQ15370 118 aa9.34□□□□□ -0.91
COLCA1-203ENST00000532918 SP6Q3SY56 376 aa9.34□□□□□ -0.91
COLCA1-203ENST00000532918 CALHM1Q8IU99 346 aa9.34□□□□□ -0.91
COLCA1-203ENST00000532918 RABAC1Q9UI14 185 aa9.34□□□□□ -0.91
COLCA1-203ENST00000532918 RP1L1Q8IWN7 2480 aaPredicted RBP9.33□□□□□ -0.92
COLCA1-203ENST00000532918 IGKV1-8A0A0C4DH67 115 aa9.33□□□□□ -0.92
COLCA1-203ENST00000532918 CST7O76096 145 aa9.33□□□□□ -0.92
COLCA1-203ENST00000532918 DMKNQ6E0U4 476 aaPredicted RBP9.33□□□□□ -0.92
COLCA1-203ENST00000532918 FAM24BQ8N5W8 94 aa9.33□□□□□ -0.92
COLCA1-203ENST00000532918 OR8D4Q8NGM9 314 aa9.33□□□□□ -0.92
COLCA1-203ENST00000532918 OR1B1Q8NGR6 318 aa9.33□□□□□ -0.92
COLCA1-203ENST00000532918 SLC25A22Q9H936 323 aa9.33□□□□□ -0.92
COLCA1-203ENST00000532918 PLSCR3Q9NRY6 295 aa9.33□□□□□ -0.92
COLCA1-203ENST00000532918 LOC105371242A0A075B767 164 aa9.33□□□□□ -0.92
COLCA1-203ENST00000532918 A1L4Q6 167 aa9.33□□□□□ -0.92
COLCA1-203ENST00000532918 ORM2P19652 201 aa9.33□□□□□ -0.92
COLCA1-203ENST00000532918 GALR1P47211 349 aa9.33□□□□□ -0.92
COLCA1-203ENST00000532918 SUCLG1P53597 346 aaKnown RBP9.33□□□□□ -0.92
COLCA1-203ENST00000532918 PLP1P60201 277 aa9.33□□□□□ -0.92
COLCA1-203ENST00000532918 LINC00303Q3SY05 128 aa9.33□□□□□ -0.92
COLCA1-203ENST00000532918 LAMTOR1Q6IAA8 161 aa9.33□□□□□ -0.92
COLCA1-203ENST00000532918 PPP1R1CQ8WVI7 109 aa9.33□□□□□ -0.92
COLCA1-203ENST00000532918 PERPQ96FX8 193 aa9.33□□□□□ -0.92
COLCA1-203ENST00000532918 AKIRIN1Q9H9L7 192 aaPredicted RBP9.33□□□□□ -0.92
COLCA1-203ENST00000532918 CLEC5AQ9NY25 188 aa9.33□□□□□ -0.92
COLCA1-203ENST00000532918 ARID1BQ8NFD5 2236 aaPredicted RBP9.33□□□□□ -0.92
COLCA1-203ENST00000532918 SMAD7O15105 426 aaKnown RBP9.33□□□□□ -0.92
COLCA1-203ENST00000532918 CD99P14209 185 aa9.33□□□□□ -0.92
COLCA1-203ENST00000532918 TUSC1Q2TAM9 212 aa9.33□□□□□ -0.92
COLCA1-203ENST00000532918 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa9.33□□□□□ -0.92
COLCA1-203ENST00000532918 ZNF738Q8NE65 137 aa9.33□□□□□ -0.92
COLCA1-203ENST00000532918 NDUFB6O95139 128 aa9.33□□□□□ -0.92
COLCA1-203ENST00000532918 IGKV1D-16P01601 117 aa9.33□□□□□ -0.92
COLCA1-203ENST00000532918 SMAGPQ0VAQ4 97 aa9.33□□□□□ -0.92
COLCA1-203ENST00000532918 IZUMO4Q1ZYL8 232 aa9.33□□□□□ -0.92
COLCA1-203ENST00000532918 TIMM23BQ5SRD1 257 aa9.33□□□□□ -0.92
COLCA1-203ENST00000532918 ZNF383Q8NA42 475 aa9.33□□□□□ -0.92
COLCA1-203ENST00000532918 TMEM167BQ9NRX6 74 aa9.33□□□□□ -0.92
COLCA1-203ENST00000532918 NAGKQ9UJ70 344 aa9.33□□□□□ -0.92
COLCA1-203ENST00000532918 CCL27Q9Y4X3 112 aa9.33□□□□□ -0.92
COLCA1-203ENST00000532918 OPN1MWP04001 364 aa9.32□□□□□ -0.92
COLCA1-203ENST00000532918 OPN1MW2P0DN77 364 aa9.32□□□□□ -0.92
COLCA1-203ENST00000532918 OPN1MW3P0DN78 364 aa9.32□□□□□ -0.92
COLCA1-203ENST00000532918 DCAF12L2Q5VW00 463 aa9.32□□□□□ -0.92
COLCA1-203ENST00000532918 PACRGQ96M98 296 aaPredicted RBP9.32□□□□□ -0.92
COLCA1-203ENST00000532918 ABHD14AQ9BUJ0 271 aa9.32□□□□□ -0.92
COLCA1-203ENST00000532918 PLAC1Q9HBJ0 212 aa9.32□□□□□ -0.92
COLCA1-203ENST00000532918 ASCL3Q9NQ33 180 aa9.32□□□□□ -0.92
COLCA1-203ENST00000532918 MMP26Q9NRE1 261 aa9.32□□□□□ -0.92
COLCA1-203ENST00000532918 OR2W1Q9Y3N9 320 aa9.32□□□□□ -0.92
COLCA1-203ENST00000532918 IGHV1-69-2A0A0G2JMI3 117 aa9.32□□□□□ -0.92
COLCA1-203ENST00000532918 OR10J1P30954 320 aa9.32□□□□□ -0.92
COLCA1-203ENST00000532918 OR4A47Q6IF82 309 aa9.32□□□□□ -0.92
COLCA1-203ENST00000532918 PDPNQ86YL7 162 aa9.32□□□□□ -0.92
COLCA1-203ENST00000532918 OR8I2Q8N0Y5 310 aa9.32□□□□□ -0.92
COLCA1-203ENST00000532918 GPX7Q96SL4 187 aaPredicted RBP9.32□□□□□ -0.92
COLCA1-203ENST00000532918 P2RX4Q99571 388 aa9.32□□□□□ -0.92
COLCA1-203ENST00000532918 TECRQ9NZ01 308 aaKnown RBP9.32□□□□□ -0.92
COLCA1-203ENST00000532918 RGS13O14921 159 aa9.32□□□□□ -0.92
COLCA1-203ENST00000532918 ASAH2BP0C7U1 165 aa9.32□□□□□ -0.92
COLCA1-203ENST00000532918 SMIM18P0DKX4 95 aa9.32□□□□□ -0.92
COLCA1-203ENST00000532918 TCTAP57738 103 aa9.32□□□□□ -0.92
COLCA1-203ENST00000532918 LRP11Q86VZ4 500 aa9.32□□□□□ -0.92
COLCA1-203ENST00000532918 STXBP6Q8NFX7 210 aa9.32□□□□□ -0.92
COLCA1-203ENST00000532918 PRSS3P2Q8NHM4 247 aa9.32□□□□□ -0.92
COLCA1-203ENST00000532918 ZNF418Q8TF45 676 aaPredicted RBP9.32□□□□□ -0.92
COLCA1-203ENST00000532918 TIMP4Q99727 224 aa9.32□□□□□ -0.92
COLCA1-203ENST00000532918 TMPRSS13Q9BYE2 586 aa9.32□□□□□ -0.92
COLCA1-203ENST00000532918 ZNF98A6NK75 572 aa9.32□□□□□ -0.92
COLCA1-203ENST00000532918 GDF9O60383 454 aa9.32□□□□□ -0.92
COLCA1-203ENST00000532918 CLDN14O95500 239 aa9.32□□□□□ -0.92
COLCA1-203ENST00000532918 ONECUT2O95948 504 aa9.32□□□□□ -0.92
COLCA1-203ENST00000532918 PF4P02776 101 aa9.32□□□□□ -0.92
COLCA1-203ENST00000532918 TGFBR1P36897 503 aa9.32□□□□□ -0.92
COLCA1-203ENST00000532918 IGLV3-21P80748 117 aaPredicted RBP9.32□□□□□ -0.92
COLCA1-203ENST00000532918 AESQ08117 197 aa9.32□□□□□ -0.92
COLCA1-203ENST00000532918 RAB32Q13637 225 aa9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 69.1 ms