RNA–Protein interactions for RNA: ENST00000532504.5

PPFIA1-222, Transcript of PTPRF interacting protein alpha 1, human

TSL 1 (best)

Gene PPFIA1, Length 5,159 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PPFIA1-222	ENST00000532504	RPS4Y2	Q8TD47	263 aa		13.44	□□□□□ -0.26
PPFIA1-222	ENST00000532504	TPPP3	Q9BW30	176 aa		13.44	□□□□□ -0.26
PPFIA1-222	ENST00000532504	NMES1	Q9C002	83 aa		13.44	□□□□□ -0.26
PPFIA1-222	ENST00000532504	ARL3	P36405	182 aa		13.44	□□□□□ -0.26
PPFIA1-222	ENST00000532504	MOGAT2	Q3SYC2	334 aa		13.44	□□□□□ -0.26
PPFIA1-222	ENST00000532504	LPAR5	Q9H1C0	372 aa		13.44	□□□□□ -0.26
PPFIA1-222	ENST00000532504	THYN1	Q9P016	225 aa		13.44	□□□□□ -0.26
PPFIA1-222	ENST00000532504	hCG_38984	A0A1B0GV85	526 aa		13.44	□□□□□ -0.26
PPFIA1-222	ENST00000532504	PIN1P1	O15428	100 aa		13.44	□□□□□ -0.26
PPFIA1-222	ENST00000532504	FCGR3A	P08637	254 aa		13.44	□□□□□ -0.26
PPFIA1-222	ENST00000532504	RCC1	P18754	421 aa	Predicted RBP	13.44	□□□□□ -0.26
PPFIA1-222	ENST00000532504	NRN1L	Q496H8	165 aa		13.44	□□□□□ -0.26
PPFIA1-222	ENST00000532504	YIPF5	Q969M3	257 aa		13.44	□□□□□ -0.26
PPFIA1-222	ENST00000532504	GINS3	Q9BRX5	216 aa		13.44	□□□□□ -0.26
PPFIA1-222	ENST00000532504	PLSCR4	Q9NRQ2	329 aa		13.44	□□□□□ -0.26
PPFIA1-222	ENST00000532504	CLDN16	Q9Y5I7	305 aa		13.44	□□□□□ -0.26
PPFIA1-222	ENST00000532504		A0A1W2PN81	502 aa		13.43	□□□□□ -0.26
PPFIA1-222	ENST00000532504	SNRPGP15	A8MWD9	76 aa		13.43	□□□□□ -0.26
PPFIA1-222	ENST00000532504	SFT2D2	O95562	160 aa		13.43	□□□□□ -0.26
PPFIA1-222	ENST00000532504	SCT	P09683	121 aa		13.43	□□□□□ -0.26
PPFIA1-222	ENST00000532504	CHRNA7	P36544	502 aa		13.43	□□□□□ -0.26
PPFIA1-222	ENST00000532504	LCN15	Q6UWW0	184 aa		13.43	□□□□□ -0.26
PPFIA1-222	ENST00000532504	FKBP11	Q9NYL4	201 aa		13.43	□□□□□ -0.26
PPFIA1-222	ENST00000532504	UBE2L5P	A0A1B0GUS4	154 aa		13.43	□□□□□ -0.26
PPFIA1-222	ENST00000532504	ANKRD20A5P	A0PJZ0	165 aa		13.43	□□□□□ -0.26
PPFIA1-222	ENST00000532504	COX7A2P2	O60397	106 aa		13.43	□□□□□ -0.26
PPFIA1-222	ENST00000532504	SCAF4	O95104	1147 aa	Known RBP	13.43	□□□□□ -0.26
PPFIA1-222	ENST00000532504	SPN	P16150	400 aa		13.43	□□□□□ -0.26
PPFIA1-222	ENST00000532504	H3F3C	Q6NXT2	135 aa		13.43	□□□□□ -0.26
PPFIA1-222	ENST00000532504	RPRML	Q8N4K4	120 aa		13.43	□□□□□ -0.26
PPFIA1-222	ENST00000532504	MARS2	Q96GW9	593 aa	Known RBP	13.43	□□□□□ -0.26
PPFIA1-222	ENST00000532504	CALY	Q9NYX4	217 aa		13.43	□□□□□ -0.26
PPFIA1-222	ENST00000532504	CACFD1	Q9UGQ2	172 aa		13.43	□□□□□ -0.26
PPFIA1-222	ENST00000532504	KIF26B	Q2KJY2	2108 aa		13.43	□□□□□ -0.26
PPFIA1-222	ENST00000532504	FAM216B	Q8N7L0	139 aa		13.43	□□□□□ -0.26
PPFIA1-222	ENST00000532504	WDR89	Q96FK6	387 aa	Predicted RBP	13.43	□□□□□ -0.26
PPFIA1-222	ENST00000532504	YAE1D1	Q9NRH1	226 aa		13.43	□□□□□ -0.26
PPFIA1-222	ENST00000532504	TUBD1	Q9UJT1	453 aa		13.43	□□□□□ -0.26
PPFIA1-222	ENST00000532504	TMED3	Q9Y3Q3	217 aa		13.43	□□□□□ -0.26
PPFIA1-222	ENST00000532504	OR10J4	P0C629	311 aa		13.43	□□□□□ -0.26
PPFIA1-222	ENST00000532504	OR2F1	Q13607	317 aa		13.43	□□□□□ -0.26
PPFIA1-222	ENST00000532504	MPPED2	Q15777	294 aa		13.43	□□□□□ -0.26
PPFIA1-222	ENST00000532504	FAM209A	Q5JX71	171 aa		13.43	□□□□□ -0.26
PPFIA1-222	ENST00000532504	CBLN4	Q9NTU7	201 aa		13.43	□□□□□ -0.26
PPFIA1-222	ENST00000532504	FGF7	P21781	194 aa		13.43	□□□□□ -0.26
PPFIA1-222	ENST00000532504	GGNBP1	Q5YKI7	109 aa		13.43	□□□□□ -0.26
PPFIA1-222	ENST00000532504	TMUB2	Q71RG4	321 aa		13.43	□□□□□ -0.26
PPFIA1-222	ENST00000532504	PNKD	Q8N490	385 aa		13.43	□□□□□ -0.26
PPFIA1-222	ENST00000532504	OR2T6	Q8NHC8	308 aa		13.43	□□□□□ -0.26
PPFIA1-222	ENST00000532504	MIXL1	Q9H2W2	232 aa		13.43	□□□□□ -0.26
PPFIA1-222	ENST00000532504	RAB29	O14966	203 aa		13.42	□□□□□ -0.26
PPFIA1-222	ENST00000532504	SOX15	O60248	233 aa		13.42	□□□□□ -0.26
PPFIA1-222	ENST00000532504	SLC25A6	P12236	298 aa		13.42	□□□□□ -0.26
PPFIA1-222	ENST00000532504	CSN1S1	P47710	185 aa		13.42	□□□□□ -0.26
PPFIA1-222	ENST00000532504	OR1A1	Q9P1Q5	309 aa		13.42	□□□□□ -0.26
PPFIA1-222	ENST00000532504	DHRS7C	A6NNS2	312 aa		13.42	□□□□□ -0.26
PPFIA1-222	ENST00000532504	CD1A	P06126	327 aa		13.42	□□□□□ -0.26
PPFIA1-222	ENST00000532504	LIPF	P07098	398 aa		13.42	□□□□□ -0.26
PPFIA1-222	ENST00000532504	G6PC	P35575	357 aa		13.42	□□□□□ -0.26
PPFIA1-222	ENST00000532504	THBS3	P49746	956 aa		13.42	□□□□□ -0.26
PPFIA1-222	ENST00000532504	BPIFB3	P59826	476 aa		13.42	□□□□□ -0.26
PPFIA1-222	ENST00000532504	OXA1L	Q15070	435 aa		13.42	□□□□□ -0.26
PPFIA1-222	ENST00000532504	PEA15	Q15121	130 aa		13.42	□□□□□ -0.26
PPFIA1-222	ENST00000532504	FAM74A1	Q5RGS3	127 aa		13.42	□□□□□ -0.26
PPFIA1-222	ENST00000532504	C1QTNF5	Q9BXJ0	243 aa		13.42	□□□□□ -0.26
PPFIA1-222	ENST00000532504	ZNF785	A8K8V0	405 aa		13.42	□□□□□ -0.26
PPFIA1-222	ENST00000532504		F6UZH7	168 aa		13.42	□□□□□ -0.26
PPFIA1-222	ENST00000532504	TOX4	O94842	621 aa		13.42	□□□□□ -0.26
PPFIA1-222	ENST00000532504	IL18BP	O95998	194 aa		13.42	□□□□□ -0.26
PPFIA1-222	ENST00000532504	IGHG3	P01860	377 aa		13.42	□□□□□ -0.26
PPFIA1-222	ENST00000532504	GAPDH	P04406	335 aa	Known RBP	13.42	□□□□□ -0.26
PPFIA1-222	ENST00000532504	PPT1	P50897	306 aa		13.42	□□□□□ -0.26
PPFIA1-222	ENST00000532504	CADM3	Q8N126	398 aa		13.42	□□□□□ -0.26
PPFIA1-222	ENST00000532504	IGKV3D-15	A0A087WSY6	115 aa		13.42	□□□□□ -0.26
PPFIA1-222	ENST00000532504	HBE1	P02100	147 aa		13.42	□□□□□ -0.26
PPFIA1-222	ENST00000532504	MGST1	P10620	155 aa	Known RBP	13.42	□□□□□ -0.26
PPFIA1-222	ENST00000532504	KCNMB1	Q16558	191 aa		13.42	□□□□□ -0.26
PPFIA1-222	ENST00000532504	FAM122C	Q6P4D5	195 aa		13.42	□□□□□ -0.26
PPFIA1-222	ENST00000532504	ABHD12	Q8N2K0	398 aa		13.42	□□□□□ -0.26
PPFIA1-222	ENST00000532504	MRGPRF	Q96AM1	343 aa		13.42	□□□□□ -0.26
PPFIA1-222	ENST00000532504	HSD17B10	Q99714	261 aa	Known RBP	13.42	□□□□□ -0.26
PPFIA1-222	ENST00000532504	KIF26A	Q9ULI4	1882 aa	Predicted RBP	13.41	□□□□□ -0.26
PPFIA1-222	ENST00000532504	C9orf170	A2RU37	121 aa		13.41	□□□□□ -0.26
PPFIA1-222	ENST00000532504	AQP3	Q92482	292 aa		13.41	□□□□□ -0.26
PPFIA1-222	ENST00000532504	NUDT16L1	Q9BRJ7	211 aa	Known RBP	13.41	□□□□□ -0.26
PPFIA1-222	ENST00000532504	MED19	A0JLT2	244 aa	Predicted RBP	13.41	□□□□□ -0.26
PPFIA1-222	ENST00000532504	ADAP1	O75689	374 aa		13.41	□□□□□ -0.26
PPFIA1-222	ENST00000532504	CTSD	P07339	412 aa	Predicted RBP	13.41	□□□□□ -0.26
PPFIA1-222	ENST00000532504	SLC51B	Q86UW2	128 aa		13.41	□□□□□ -0.26
PPFIA1-222	ENST00000532504	FAM222B	Q8WU58	562 aa		13.41	□□□□□ -0.26
PPFIA1-222	ENST00000532504	SLC2A9	Q9NRM0	540 aa		13.41	□□□□□ -0.26
PPFIA1-222	ENST00000532504	KCNK7	Q9Y2U2	307 aa		13.41	□□□□□ -0.26
PPFIA1-222	ENST00000532504	ACACB	O00763	2458 aa		13.41	□□□□□ -0.26
PPFIA1-222	ENST00000532504	S100A2	P29034	98 aa		13.41	□□□□□ -0.26
PPFIA1-222	ENST00000532504	B3GALT5-AS1	P59052	145 aa		13.41	□□□□□ -0.26
PPFIA1-222	ENST00000532504	ETV3L	Q6ZN32	361 aa		13.41	□□□□□ -0.26
PPFIA1-222	ENST00000532504	GCSAM	Q8N6F7	178 aa		13.41	□□□□□ -0.26
PPFIA1-222	ENST00000532504	PLEKHA2	Q9HB19	425 aa		13.41	□□□□□ -0.26
PPFIA1-222	ENST00000532504	MTCH1	Q9NZJ7	389 aa		13.41	□□□□□ -0.26
PPFIA1-222	ENST00000532504	IGKV3-7	A0A075B6H7	116 aa		13.41	□□□□□ -0.26

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