RNA–Protein interactions for RNA: ENST00000532126.1

HMGB1P42-201, Transcript of high mobility group box 1 pseudogene 42, humanhuman

BASIC

Gene HMGB1P42, Length 553 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P42-201ENST00000532126 FGFRL1Q8N441 504 aa4.75□□□□□ -1.65
HMGB1P42-201ENST00000532126 ZNF561Q8N587 486 aa4.75□□□□□ -1.65
HMGB1P42-201ENST00000532126 NANOGP1Q8N7R0 232 aa4.75□□□□□ -1.65
HMGB1P42-201ENST00000532126 ZFP41Q8N8Y5 198 aa4.75□□□□□ -1.65
HMGB1P42-201ENST00000532126 ZNF485Q8NCK3 441 aa4.75□□□□□ -1.65
HMGB1P42-201ENST00000532126 ZNRF1Q8ND25 227 aa4.75□□□□□ -1.65
HMGB1P42-201ENST00000532126 OR5D18Q8NGL1 313 aa4.75□□□□□ -1.65
HMGB1P42-201ENST00000532126 RPS4Y2Q8TD47 263 aa4.75□□□□□ -1.65
HMGB1P42-201ENST00000532126 ZNF418Q8TF45 676 aaPredicted RBP4.75□□□□□ -1.65
HMGB1P42-201ENST00000532126 C22orf15Q8WYQ4 148 aa4.75□□□□□ -1.65
HMGB1P42-201ENST00000532126 RGP1Q92546 391 aaPredicted RBP4.75□□□□□ -1.65
HMGB1P42-201ENST00000532126 GHSRQ92847 366 aa4.75□□□□□ -1.65
HMGB1P42-201ENST00000532126 RFT1Q96AA3 541 aa4.75□□□□□ -1.65
HMGB1P42-201ENST00000532126 UPRTQ96BW1 309 aa4.75□□□□□ -1.65
HMGB1P42-201ENST00000532126 CPNE2Q96FN4 548 aaPredicted RBP4.75□□□□□ -1.65
HMGB1P42-201ENST00000532126 SDSLQ96GA7 329 aa4.75□□□□□ -1.65
HMGB1P42-201ENST00000532126 OR14A2Q96R54 314 aa4.75□□□□□ -1.65
HMGB1P42-201ENST00000532126 DCTN5Q9BTE1 182 aa4.75□□□□□ -1.65
HMGB1P42-201ENST00000532126 CDCA4Q9BXL8 241 aa4.75□□□□□ -1.65
HMGB1P42-201ENST00000532126 HES4Q9HCC6 221 aa4.75□□□□□ -1.65
HMGB1P42-201ENST00000532126 DNAJC4Q9NNZ3 241 aa4.75□□□□□ -1.65
HMGB1P42-201ENST00000532126 TAS2R4Q9NYW5 299 aa4.75□□□□□ -1.65
HMGB1P42-201ENST00000532126 ONECUT1Q9UBC0 465 aa4.75□□□□□ -1.65
HMGB1P42-201ENST00000532126 RPUSD1Q9UJJ7 312 aaKnown RBP4.75□□□□□ -1.65
HMGB1P42-201ENST00000532126 ZNF222Q9UK12 451 aa4.75□□□□□ -1.65
HMGB1P42-201ENST00000532126 TPRKBQ9Y3C4 175 aa4.75□□□□□ -1.65
HMGB1P42-201ENST00000532126 SONP18583 2426 aaKnown RBP4.75□□□□□ -1.65
HMGB1P42-201ENST00000532126 NAV3Q8IVL0 2385 aa4.75□□□□□ -1.65
HMGB1P42-201ENST00000532126 ABCA2Q9BZC7 2435 aa4.74□□□□□ -1.65
HMGB1P42-201ENST00000532126 TRAV24A0A0B4J272 114 aa4.74□□□□□ -1.65
HMGB1P42-201ENST00000532126 TRAV40A0A0B4J280 105 aa4.74□□□□□ -1.65
HMGB1P42-201ENST00000532126 A0A0U1RRA0 63 aa4.74□□□□□ -1.65
HMGB1P42-201ENST00000532126 PNMA8CA0A1B0GUJ8 204 aa4.74□□□□□ -1.65
HMGB1P42-201ENST00000532126 DPPA5A6NC42 116 aa4.74□□□□□ -1.65
HMGB1P42-201ENST00000532126 RNF212BA8MTL3 300 aa4.74□□□□□ -1.65
HMGB1P42-201ENST00000532126 F8VVB4 439 aa4.74□□□□□ -1.65
HMGB1P42-201ENST00000532126 F8VWA3 439 aa4.74□□□□□ -1.65
HMGB1P42-201ENST00000532126 J3QR06 171 aa4.74□□□□□ -1.65
HMGB1P42-201ENST00000532126 ANGPTL7O43827 346 aa4.74□□□□□ -1.65
HMGB1P42-201ENST00000532126 IGHV4-38-2P0DP08 117 aa4.74□□□□□ -1.65
HMGB1P42-201ENST00000532126 CELP19835 753 aa4.74□□□□□ -1.65
HMGB1P42-201ENST00000532126 NPBWR2P48146 333 aa4.74□□□□□ -1.65
HMGB1P42-201ENST00000532126 GP2P55259 537 aaKnown RBP4.74□□□□□ -1.65
HMGB1P42-201ENST00000532126 CAV3P56539 151 aa4.74□□□□□ -1.65
HMGB1P42-201ENST00000532126 SLC35A2P78381 396 aa4.74□□□□□ -1.65
HMGB1P42-201ENST00000532126 COL10A1Q03692 680 aa4.74□□□□□ -1.65
HMGB1P42-201ENST00000532126 UBE2V1Q13404 147 aa4.74□□□□□ -1.65
HMGB1P42-201ENST00000532126 SPHARQ15513 63 aa4.74□□□□□ -1.65
HMGB1P42-201ENST00000532126 KISS1Q15726 138 aa4.74□□□□□ -1.65
HMGB1P42-201ENST00000532126 Q499Y3 187 aa4.74□□□□□ -1.65
HMGB1P42-201ENST00000532126 SPANXN2Q5MJ10 180 aa4.74□□□□□ -1.65
HMGB1P42-201ENST00000532126 GPR157Q5UAW9 335 aa4.74□□□□□ -1.65
HMGB1P42-201ENST00000532126 RBMS3Q6XE24 437 aaKnown RBP4.74□□□□□ -1.65
HMGB1P42-201ENST00000532126 SATL1Q86VE3 508 aa4.74□□□□□ -1.65
HMGB1P42-201ENST00000532126 SAXO1Q8IYX7 474 aa4.74□□□□□ -1.65
HMGB1P42-201ENST00000532126 FAM58AQ8N1B3 248 aa4.74□□□□□ -1.65
HMGB1P42-201ENST00000532126 COMMD1Q8N668 190 aa4.74□□□□□ -1.65
HMGB1P42-201ENST00000532126 CD177Q8N6Q3 437 aa4.74□□□□□ -1.65
HMGB1P42-201ENST00000532126 ASCC1Q8N9N2 400 aaKnown RBP4.74□□□□□ -1.65
HMGB1P42-201ENST00000532126 ZSCAN4Q8NAM6 433 aaPredicted RBP4.74□□□□□ -1.65
HMGB1P42-201ENST00000532126 LY6G5BQ8NDX9 201 aa4.74□□□□□ -1.65
HMGB1P42-201ENST00000532126 OR13C5Q8NGS8 318 aa4.74□□□□□ -1.65
HMGB1P42-201ENST00000532126 TMEM158Q8WZ71 300 aa4.74□□□□□ -1.65
HMGB1P42-201ENST00000532126 EMG1Q92979 244 aaKnown RBP4.74□□□□□ -1.65
HMGB1P42-201ENST00000532126 TMEM106AQ96A25 262 aa4.74□□□□□ -1.65
HMGB1P42-201ENST00000532126 PGLYRP3Q96LB9 341 aa4.74□□□□□ -1.65
HMGB1P42-201ENST00000532126 CNBD2Q96M20 576 aa4.74□□□□□ -1.65
HMGB1P42-201ENST00000532126 SPACA5Q96QH8 159 aa4.74□□□□□ -1.65
HMGB1P42-201ENST00000532126 TBX15Q96SF7 602 aa4.74□□□□□ -1.65
HMGB1P42-201ENST00000532126 GPER1Q99527 375 aa4.74□□□□□ -1.65
HMGB1P42-201ENST00000532126 SLC6A7Q99884 636 aa4.74□□□□□ -1.65
HMGB1P42-201ENST00000532126 MND1Q9BWT6 205 aa4.74□□□□□ -1.65
HMGB1P42-201ENST00000532126 SUCNR1Q9BXA5 334 aa4.74□□□□□ -1.65
HMGB1P42-201ENST00000532126 GON7Q9BXV9 100 aa4.74□□□□□ -1.65
HMGB1P42-201ENST00000532126 CCDC90BQ9GZT6 254 aa4.74□□□□□ -1.65
HMGB1P42-201ENST00000532126 FAM234AQ9H0X4 552 aa4.74□□□□□ -1.65
HMGB1P42-201ENST00000532126 Q9H521 79 aa4.74□□□□□ -1.65
HMGB1P42-201ENST00000532126 ELL3Q9HB65 397 aaPredicted RBP4.74□□□□□ -1.65
HMGB1P42-201ENST00000532126 TMEM138Q9NPI0 162 aa4.74□□□□□ -1.65
HMGB1P42-201ENST00000532126 RBFOX1Q9NWB1 397 aaKnown RBP4.74□□□□□ -1.65
HMGB1P42-201ENST00000532126 PAK1IP1Q9NWT1 392 aaPredicted RBP4.74□□□□□ -1.65
HMGB1P42-201ENST00000532126 RCC2Q9P258 522 aaKnown RBP4.74□□□□□ -1.65
HMGB1P42-201ENST00000532126 CKLFQ9UBR5 152 aa4.74□□□□□ -1.65
HMGB1P42-201ENST00000532126 GLS2Q9UI32 602 aa4.74□□□□□ -1.65
HMGB1P42-201ENST00000532126 RAB26Q9ULW5 256 aa4.74□□□□□ -1.65
HMGB1P42-201ENST00000532126 KPTNQ9Y664 436 aa4.74□□□□□ -1.65
HMGB1P42-201ENST00000532126 NIPBLQ6KC79 2804 aaeCLIP4.74□□□□□ -1.65
HMGB1P42-201ENST00000532126 YLPM1P49750 1951 aaKnown RBP4.74□□□□□ -1.65
HMGB1P42-201ENST00000532126 SVEP1Q4LDE5 3571 aa4.74□□□□□ -1.65
HMGB1P42-201ENST00000532126 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP4.73□□□□□ -1.65
HMGB1P42-201ENST00000532126 MALRD1Q5VYJ5 2156 aa4.73□□□□□ -1.65
HMGB1P42-201ENST00000532126 IGKV1-12A0A0C4DH73 117 aa4.73□□□□□ -1.65
HMGB1P42-201ENST00000532126 TRBV5-5A0A0J9YX44 114 aa4.73□□□□□ -1.65
HMGB1P42-201ENST00000532126 A0A1W2PN81 502 aa4.73□□□□□ -1.65
HMGB1P42-201ENST00000532126 A0A1W2PPK0 400 aa4.73□□□□□ -1.65
HMGB1P42-201ENST00000532126 CHEK1O14757 476 aa4.73□□□□□ -1.65
HMGB1P42-201ENST00000532126 HAND1O96004 215 aa4.73□□□□□ -1.65
HMGB1P42-201ENST00000532126 IGKV1D-12P01611 117 aa4.73□□□□□ -1.65
HMGB1P42-201ENST00000532126 ALDOBP05062 364 aa4.73□□□□□ -1.65
HMGB1P42-201ENST00000532126 ZNF44P15621 663 aa4.73□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms