RNA–Protein interactions for RNA: ENST00000531873.5

CD44-234, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 584 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-234ENST00000531873 NAV1Q8NEY1 1877 aa1.58□□□□□ -2.16
CD44-234ENST00000531873 PLXNB1O43157 2135 aa1.58□□□□□ -2.16
CD44-234ENST00000531873 FANCD2Q9BXW9 1451 aa1.58□□□□□ -2.16
CD44-234ENST00000531873 LRRC7Q96NW7 1537 aa1.58□□□□□ -2.16
CD44-234ENST00000531873 A0A1W2PQ67 120 aa1.58□□□□□ -2.16
CD44-234ENST00000531873 OR5H14A6NHG9 310 aa1.58□□□□□ -2.16
CD44-234ENST00000531873 H3BQ85 93 aa1.58□□□□□ -2.16
CD44-234ENST00000531873 LIN7AO14910 233 aaPredicted RBP1.58□□□□□ -2.16
CD44-234ENST00000531873 ATP6V1G2O95670 118 aa1.58□□□□□ -2.16
CD44-234ENST00000531873 LTAP01374 205 aa1.58□□□□□ -2.16
CD44-234ENST00000531873 PSKH1P11801 424 aa1.58□□□□□ -2.16
CD44-234ENST00000531873 ADORA1P30542 326 aa1.58□□□□□ -2.16
CD44-234ENST00000531873 HSPA13P48723 471 aa1.58□□□□□ -2.16
CD44-234ENST00000531873 INPP1P49441 399 aa1.58□□□□□ -2.16
CD44-234ENST00000531873 GTF2BQ00403 316 aa1.58□□□□□ -2.16
CD44-234ENST00000531873 IL15RAQ13261 267 aa1.58□□□□□ -2.16
CD44-234ENST00000531873 SKP2Q13309 424 aa1.58□□□□□ -2.16
CD44-234ENST00000531873 PAFAH1B3Q15102 231 aaKnown RBP1.58□□□□□ -2.16
CD44-234ENST00000531873 MMDQ15546 238 aa1.58□□□□□ -2.16
CD44-234ENST00000531873 HSP90B2PQ58FF3 399 aa1.58□□□□□ -2.16
CD44-234ENST00000531873 PRR9Q5T870 116 aa1.58□□□□□ -2.16
CD44-234ENST00000531873 HENMT1Q5T8I9 393 aaKnown RBP1.58□□□□□ -2.16
CD44-234ENST00000531873 SPNS3Q6ZMD2 512 aa1.58□□□□□ -2.16
CD44-234ENST00000531873 VN1R4Q7Z5H5 301 aa1.58□□□□□ -2.16
CD44-234ENST00000531873 KRTCAP2Q8N6L1 136 aa1.58□□□□□ -2.16
CD44-234ENST00000531873 YIPF7Q8N8F6 280 aa1.58□□□□□ -2.16
CD44-234ENST00000531873 C1orf64Q8NEQ6 169 aa1.58□□□□□ -2.16
CD44-234ENST00000531873 OR52E4Q8NGH9 312 aa1.58□□□□□ -2.16
CD44-234ENST00000531873 OR5D18Q8NGL1 313 aa1.58□□□□□ -2.16
CD44-234ENST00000531873 OR9I1Q8NGQ6 314 aa1.58□□□□□ -2.16
CD44-234ENST00000531873 SUN5Q8TC36 379 aa1.58□□□□□ -2.16
CD44-234ENST00000531873 KCTD4Q8WVF5 259 aa1.58□□□□□ -2.16
CD44-234ENST00000531873 TAMM41Q96BW9 452 aa1.58□□□□□ -2.16
CD44-234ENST00000531873 PPCDCQ96CD2 204 aa1.58□□□□□ -2.16
CD44-234ENST00000531873 CMBLQ96DG6 245 aa1.58□□□□□ -2.16
CD44-234ENST00000531873 ARL5BQ96KC2 179 aa1.58□□□□□ -2.16
CD44-234ENST00000531873 OR2V2Q96R30 315 aa1.58□□□□□ -2.16
CD44-234ENST00000531873 POTEKPQ9BYX7 375 aa1.58□□□□□ -2.16
CD44-234ENST00000531873 GABARAPL1Q9H0R8 117 aa1.58□□□□□ -2.16
CD44-234ENST00000531873 ALX4Q9H161 411 aaPredicted RBP1.58□□□□□ -2.16
CD44-234ENST00000531873 OR2D2Q9H210 308 aa1.58□□□□□ -2.16
CD44-234ENST00000531873 OR51B4Q9Y5P0 310 aa1.58□□□□□ -2.16
CD44-234ENST00000531873 ICOSQ9Y6W8 199 aa1.58□□□□□ -2.16
CD44-234ENST00000531873 R4GN34 69 aa1.58□□□□□ -2.16
CD44-234ENST00000531873 KIF13AQ9H1H9 1805 aa1.58□□□□□ -2.16
CD44-234ENST00000531873 CLUHO75153 1309 aa1.58□□□□□ -2.16
CD44-234ENST00000531873 RAPGEF6Q8TEU7 1601 aa1.58□□□□□ -2.16
CD44-234ENST00000531873 CCDC180Q9P1Z9 1646 aa1.58□□□□□ -2.16
CD44-234ENST00000531873 KIF21AQ7Z4S6 1674 aa1.58□□□□□ -2.16
CD44-234ENST00000531873 CHD5Q8TDI0 1954 aa1.58□□□□□ -2.16
CD44-234ENST00000531873 DSCAMO60469 2012 aa1.57□□□□□ -2.16
CD44-234ENST00000531873 IGKV1-12A0A0C4DH73 117 aa1.57□□□□□ -2.16
CD44-234ENST00000531873 TINCRA0A1B0GVN0 87 aa1.57□□□□□ -2.16
CD44-234ENST00000531873 METTL15A6NJ78 407 aa1.57□□□□□ -2.16
CD44-234ENST00000531873 LEUTXA8MZ59 168 aa1.57□□□□□ -2.16
CD44-234ENST00000531873 H3BMM0 161 aa1.57□□□□□ -2.16
CD44-234ENST00000531873 K7ERS5 55 aa1.57□□□□□ -2.16
CD44-234ENST00000531873 CCRL2O00421 344 aa1.57□□□□□ -2.16
CD44-234ENST00000531873 HPGDSO60760 199 aa1.57□□□□□ -2.16
CD44-234ENST00000531873 NIPSNAP2O75323 286 aa1.57□□□□□ -2.16
CD44-234ENST00000531873 SOX14O95416 240 aa1.57□□□□□ -2.16
CD44-234ENST00000531873 IGKV1D-12P01611 117 aa1.57□□□□□ -2.16
CD44-234ENST00000531873 CD5P06127 495 aa1.57□□□□□ -2.16
CD44-234ENST00000531873 CTSEP14091 401 aa1.57□□□□□ -2.16
CD44-234ENST00000531873 HIST1H1CP16403 213 aaKnown RBP1.57□□□□□ -2.16
CD44-234ENST00000531873 F8A1P23610 371 aa1.57□□□□□ -2.16
CD44-234ENST00000531873 RCVRNP35243 200 aa1.57□□□□□ -2.16
CD44-234ENST00000531873 CDC34P49427 236 aaPredicted RBP1.57□□□□□ -2.16
CD44-234ENST00000531873 RPS11P62280 158 aaKnown RBP eCLIP1.57□□□□□ -2.16
CD44-234ENST00000531873 MGAT3Q09327 533 aa1.57□□□□□ -2.16
CD44-234ENST00000531873 HLA-DRB5Q30154 266 aa1.57□□□□□ -2.16
CD44-234ENST00000531873 DNAL1Q4LDG9 190 aa1.57□□□□□ -2.16
CD44-234ENST00000531873 PDZD11Q5EBL8 140 aa1.57□□□□□ -2.16
CD44-234ENST00000531873 CDKL4Q5MAI5 379 aa1.57□□□□□ -2.16
CD44-234ENST00000531873 SPATA31B1PQ5VZV4 182 aa1.57□□□□□ -2.16
CD44-234ENST00000531873 EBLN2Q6P2I7 272 aa1.57□□□□□ -2.16
CD44-234ENST00000531873 TTC33Q6PID6 262 aaPredicted RBP1.57□□□□□ -2.16
CD44-234ENST00000531873 DNM1P34Q6PK57 102 aa1.57□□□□□ -2.16
CD44-234ENST00000531873 TCF23Q7RTU1 214 aa1.57□□□□□ -2.16
CD44-234ENST00000531873 DOLPP1Q86YN1 238 aa1.57□□□□□ -2.16
CD44-234ENST00000531873 SLC13A5Q86YT5 568 aaPredicted RBP1.57□□□□□ -2.16
CD44-234ENST00000531873 TMEM251Q8N6I4 163 aa1.57□□□□□ -2.16
CD44-234ENST00000531873 DTD1Q8TEA8 209 aa1.57□□□□□ -2.16
CD44-234ENST00000531873 UBE2WQ96B02 151 aa1.57□□□□□ -2.16
CD44-234ENST00000531873 SMIM19Q96E16 107 aa1.57□□□□□ -2.16
CD44-234ENST00000531873 SMIM12Q96EX1 92 aa1.57□□□□□ -2.16
CD44-234ENST00000531873 PYURFQ96I23 114 aa1.57□□□□□ -2.16
CD44-234ENST00000531873 PARVGQ9HBI0 331 aa1.57□□□□□ -2.16
CD44-234ENST00000531873 ZNF286AQ9HBT8 521 aa1.57□□□□□ -2.16
CD44-234ENST00000531873 U3KQK5 164 aa1.57□□□□□ -2.16
CD44-234ENST00000531873 NHSL1Q5SYE7 1610 aa1.57□□□□□ -2.16
CD44-234ENST00000531873 COL4A4P53420 1690 aaPredicted RBP1.57□□□□□ -2.16
CD44-234ENST00000531873 COL1A2P08123 1366 aa1.57□□□□□ -2.16
CD44-234ENST00000531873 UNC13AQ9UPW8 1703 aa1.57□□□□□ -2.16
CD44-234ENST00000531873 RTEL1-TNFRSF6BF6WH68 1400 aa1.57□□□□□ -2.16
CD44-234ENST00000531873 TRANK1O15050 2925 aa1.56□□□□□ -2.16
CD44-234ENST00000531873 CPS1P31327 1500 aa1.56□□□□□ -2.16
CD44-234ENST00000531873 CLASP1Q7Z460 1538 aa1.56□□□□□ -2.16
CD44-234ENST00000531873 OTOFQ9HC10 1997 aa1.56□□□□□ -2.16
CD44-234ENST00000531873 KIAA0556O60303 1618 aa1.56□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms