RNA–Protein interactions for RNA: ENST00000531513.5

USP47-211, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 2

Gene USP47, Length 936 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-211ENST00000531513 PLA2G12AQ9BZM1 189 aa2.61□□□□□ -1.99
USP47-211ENST00000531513 MAP1LC3AQ9H492 121 aa2.61□□□□□ -1.99
USP47-211ENST00000531513 VSIRQ9H7M9 311 aa2.61□□□□□ -1.99
USP47-211ENST00000531513 INIPQ9NRY2 104 aa2.61□□□□□ -1.99
USP47-211ENST00000531513 PARVAQ9NVD7 372 aa2.61□□□□□ -1.99
USP47-211ENST00000531513 GLS2Q9UI32 602 aa2.61□□□□□ -1.99
USP47-211ENST00000531513 PLXNB3Q9ULL4 1909 aa2.61□□□□□ -1.99
USP47-211ENST00000531513 A0A1W2PP64 1363 aa2.61□□□□□ -1.99
USP47-211ENST00000531513 F5H5P2 479 aa2.6□□□□□ -1.99
USP47-211ENST00000531513 K7ERS5 55 aa2.6□□□□□ -1.99
USP47-211ENST00000531513 TGOLN2O43493 480 aa2.6□□□□□ -1.99
USP47-211ENST00000531513 RPP14O95059 124 aaKnown RBP2.6□□□□□ -1.99
USP47-211ENST00000531513 KCNK2O95069 426 aa2.6□□□□□ -1.99
USP47-211ENST00000531513 GABRA1P14867 456 aa2.6□□□□□ -1.99
USP47-211ENST00000531513 ZNF7P17097 686 aaPredicted RBP2.6□□□□□ -1.99
USP47-211ENST00000531513 S100A2P29034 98 aa2.6□□□□□ -1.99
USP47-211ENST00000531513 CDKN2CP42773 168 aa2.6□□□□□ -1.99
USP47-211ENST00000531513 EIF4EBP1Q13541 118 aaPredicted RBP2.6□□□□□ -1.99
USP47-211ENST00000531513 MMDQ15546 238 aa2.6□□□□□ -1.99
USP47-211ENST00000531513 TBPL2Q6SJ96 375 aa2.6□□□□□ -1.99
USP47-211ENST00000531513 TMEM144Q7Z5S9 345 aa2.6□□□□□ -1.99
USP47-211ENST00000531513 DAZ4Q86SG3 579 aaKnown RBP2.6□□□□□ -1.99
USP47-211ENST00000531513 AMN1Q8IY45 258 aa2.6□□□□□ -1.99
USP47-211ENST00000531513 ZFP82Q8N141 532 aa2.6□□□□□ -1.99
USP47-211ENST00000531513 OR4C13Q8NGP0 309 aa2.6□□□□□ -1.99
USP47-211ENST00000531513 OR9I1Q8NGQ6 314 aa2.6□□□□□ -1.99
USP47-211ENST00000531513 OR10D3Q8NH80 312 aa2.6□□□□□ -1.99
USP47-211ENST00000531513 YIPF5Q969M3 257 aa2.6□□□□□ -1.99
USP47-211ENST00000531513 GALMQ96C23 342 aa2.6□□□□□ -1.99
USP47-211ENST00000531513 MRPS26Q9BYN8 205 aaKnown RBP2.6□□□□□ -1.99
USP47-211ENST00000531513 DERL2Q9GZP9 239 aa2.6□□□□□ -1.99
USP47-211ENST00000531513 OR51B6Q9H340 312 aa2.6□□□□□ -1.99
USP47-211ENST00000531513 DAZ1Q9NQZ3 744 aaKnown RBP2.6□□□□□ -1.99
USP47-211ENST00000531513 GUCA1BQ9UMX6 200 aa2.6□□□□□ -1.99
USP47-211ENST00000531513 ANKRD12Q6UB98 2062 aa2.6□□□□□ -1.99
USP47-211ENST00000531513 COL27A1Q8IZC6 1860 aaPredicted RBP2.6□□□□□ -1.99
USP47-211ENST00000531513 LOXHD1Q8IVV2 1947 aa2.6□□□□□ -1.99
USP47-211ENST00000531513 CABIN1Q9Y6J0 2220 aa2.6□□□□□ -1.99
USP47-211ENST00000531513 SLIT3O75094 1523 aa2.59□□□□□ -1.99
USP47-211ENST00000531513 IGHV3-21A0A0B4J1V1 117 aa2.59□□□□□ -1.99
USP47-211ENST00000531513 TRAV40A0A0B4J280 105 aa2.59□□□□□ -1.99
USP47-211ENST00000531513 TMEM150BA6NC51 233 aa2.59□□□□□ -1.99
USP47-211ENST00000531513 M0R036 132 aa2.59□□□□□ -1.99
USP47-211ENST00000531513 ACOX3O15254 700 aa2.59□□□□□ -1.99
USP47-211ENST00000531513 LTAP01374 205 aa2.59□□□□□ -1.99
USP47-211ENST00000531513 HBZP02008 142 aa2.59□□□□□ -1.99
USP47-211ENST00000531513 IGLV7-43P04211 117 aa2.59□□□□□ -1.99
USP47-211ENST00000531513 ISG15P05161 165 aa2.59□□□□□ -1.99
USP47-211ENST00000531513 CALB1P05937 261 aa2.59□□□□□ -1.99
USP47-211ENST00000531513 PSMA1P25786 263 aaKnown RBP2.59□□□□□ -1.99
USP47-211ENST00000531513 DAD1P61803 113 aa2.59□□□□□ -1.99
USP47-211ENST00000531513 STX5Q13190 355 aa2.59□□□□□ -1.99
USP47-211ENST00000531513 CASP8Q14790 479 aa2.59□□□□□ -1.99
USP47-211ENST00000531513 LPCAT4Q643R3 524 aa2.59□□□□□ -1.99
USP47-211ENST00000531513 LAIR2Q6ISS4 152 aa2.59□□□□□ -1.99
USP47-211ENST00000531513 TNFAIP8L2Q6P589 184 aaPredicted RBP2.59□□□□□ -1.99
USP47-211ENST00000531513 FAM131AQ6UXB0 335 aa2.59□□□□□ -1.99
USP47-211ENST00000531513 TCF23Q7RTU1 214 aa2.59□□□□□ -1.99
USP47-211ENST00000531513 NATD1Q8N6N6 113 aa2.59□□□□□ -1.99
USP47-211ENST00000531513 KLF14Q8TD94 323 aaPredicted RBP2.59□□□□□ -1.99
USP47-211ENST00000531513 RAB8BQ92930 207 aa2.59□□□□□ -1.99
USP47-211ENST00000531513 RBPMSQ93062 196 aaKnown RBP2.59□□□□□ -1.99
USP47-211ENST00000531513 TESCQ96BS2 214 aa2.59□□□□□ -1.99
USP47-211ENST00000531513 C3orf18Q9UK00 162 aa2.59□□□□□ -1.99
USP47-211ENST00000531513 NUP214P35658 2090 aaPredicted RBP2.59□□□□□ -2
USP47-211ENST00000531513 DOCK8Q8NF50 2099 aa2.59□□□□□ -2
USP47-211ENST00000531513 TEX50A0A1B0GTY4 177 aa2.58□□□□□ -2
USP47-211ENST00000531513 OR5H14A6NHG9 310 aa2.58□□□□□ -2
USP47-211ENST00000531513 ARGFXA6NJG6 315 aa2.58□□□□□ -2
USP47-211ENST00000531513 ZNF98A6NK75 572 aa2.58□□□□□ -2
USP47-211ENST00000531513 COLCA2A8K830 154 aa2.58□□□□□ -2
USP47-211ENST00000531513 LEUTXA8MZ59 168 aa2.58□□□□□ -2
USP47-211ENST00000531513 C16orf90A8MZG2 172 aa2.58□□□□□ -2
USP47-211ENST00000531513 COPEO14579 308 aa2.58□□□□□ -2
USP47-211ENST00000531513 HLA-DRAP01903 254 aa2.58□□□□□ -2
USP47-211ENST00000531513 IL6P05231 212 aa2.58□□□□□ -2
USP47-211ENST00000531513 ATP5G1P05496 136 aa2.58□□□□□ -2
USP47-211ENST00000531513 CRYBA1P05813 215 aa2.58□□□□□ -2
USP47-211ENST00000531513 CXCL2P19875 107 aa2.58□□□□□ -2
USP47-211ENST00000531513 CXCL3P19876 107 aa2.58□□□□□ -2
USP47-211ENST00000531513 RPS12P25398 132 aaKnown RBP2.58□□□□□ -2
USP47-211ENST00000531513 RPL12P30050 165 aaKnown RBP2.58□□□□□ -2
USP47-211ENST00000531513 CXCR4P61073 352 aa2.58□□□□□ -2
USP47-211ENST00000531513 FMODQ06828 376 aa2.58□□□□□ -2
USP47-211ENST00000531513 PPP1R1AQ13522 171 aa2.58□□□□□ -2
USP47-211ENST00000531513 ZCWPW2Q504Y3 356 aa2.58□□□□□ -2
USP47-211ENST00000531513 ACSM3Q53FZ2 586 aa2.58□□□□□ -2
USP47-211ENST00000531513 TRMT12Q53H54 448 aaKnown RBP2.58□□□□□ -2
USP47-211ENST00000531513 HES3Q5TGS1 186 aa2.58□□□□□ -2
USP47-211ENST00000531513 C16orf47Q6ZP98 133 aaPredicted RBP2.58□□□□□ -2
USP47-211ENST00000531513 Q6ZRU5 148 aa2.58□□□□□ -2
USP47-211ENST00000531513 ZBTB8OSQ8IWT0 167 aa2.58□□□□□ -2
USP47-211ENST00000531513 CDC26Q8NHZ8 85 aa2.58□□□□□ -2
USP47-211ENST00000531513 SPPL2BQ8TCT7 592 aa2.58□□□□□ -2
USP47-211ENST00000531513 KCTD4Q8WVF5 259 aa2.58□□□□□ -2
USP47-211ENST00000531513 TMBIM1Q969X1 311 aa2.58□□□□□ -2
USP47-211ENST00000531513 APOBEC3DQ96AK3 386 aaPredicted RBP2.58□□□□□ -2
USP47-211ENST00000531513 TLCD1Q96CP7 247 aa2.58□□□□□ -2
USP47-211ENST00000531513 ALX4Q9H161 411 aaPredicted RBP2.58□□□□□ -2
USP47-211ENST00000531513 GTSF1LQ9H1H1 148 aa2.58□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms