RNA–Protein interactions for RNA: ENST00000531118.5

CD44-232, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 2

Gene CD44, Length 877 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-232ENST00000531118 TCTEX1D1Q8N7M0 179 aa6.18□□□□□ -1.42
CD44-232ENST00000531118 AQP11Q8NBQ7 271 aa6.18□□□□□ -1.42
CD44-232ENST00000531118 BBS1Q8NFJ9 593 aa6.18□□□□□ -1.42
CD44-232ENST00000531118 OR10A7Q8NGE5 316 aa6.18□□□□□ -1.42
CD44-232ENST00000531118 OR51T1Q8NGJ9 327 aa6.18□□□□□ -1.42
CD44-232ENST00000531118 OR2K2Q8NGT1 345 aa6.18□□□□□ -1.42
CD44-232ENST00000531118 TEX47Q8TBZ9 253 aa6.18□□□□□ -1.42
CD44-232ENST00000531118 PHLDA1Q8WV24 401 aaPredicted RBP6.18□□□□□ -1.42
CD44-232ENST00000531118 CLUHP3Q96NS8 147 aa6.18□□□□□ -1.42
CD44-232ENST00000531118 KRTAP9-2Q9BYQ4 174 aa6.18□□□□□ -1.42
CD44-232ENST00000531118 CST11Q9H112 138 aa6.18□□□□□ -1.42
CD44-232ENST00000531118 EFCAB1Q9HAE3 211 aa6.18□□□□□ -1.42
CD44-232ENST00000531118 SLC2A8Q9NY64 477 aa6.18□□□□□ -1.42
CD44-232ENST00000531118 OR52A1Q9UKL2 312 aa6.18□□□□□ -1.42
CD44-232ENST00000531118 R4GMQ9 66 aa6.18□□□□□ -1.42
CD44-232ENST00000531118 A3GALT2U3KPV4 340 aa6.18□□□□□ -1.42
CD44-232ENST00000531118 MSGN1A6NI15 193 aa6.17□□□□□ -1.42
CD44-232ENST00000531118 ZNF561-AS1K7EIQ3 104 aa6.17□□□□□ -1.42
CD44-232ENST00000531118 SLC31A2O15432 143 aa6.17□□□□□ -1.42
CD44-232ENST00000531118 KDM4BO94953 1096 aa6.17□□□□□ -1.42
CD44-232ENST00000531118 CCNB2O95067 398 aa6.17□□□□□ -1.42
CD44-232ENST00000531118 GASTP01350 101 aa6.17□□□□□ -1.42
CD44-232ENST00000531118 CSN3P07498 182 aa6.17□□□□□ -1.42
CD44-232ENST00000531118 SLC2A5P22732 501 aa6.17□□□□□ -1.42
CD44-232ENST00000531118 C21orf33P30042 268 aaPredicted RBP6.17□□□□□ -1.42
CD44-232ENST00000531118 RBP2P50120 134 aa6.17□□□□□ -1.42
CD44-232ENST00000531118 ATP1B3P54709 279 aa6.17□□□□□ -1.42
CD44-232ENST00000531118 SYNJ2BPP57105 145 aa6.17□□□□□ -1.42
CD44-232ENST00000531118 SLC35D3Q5M8T2 416 aa6.17□□□□□ -1.42
CD44-232ENST00000531118 RSBN1Q5VWQ0 802 aaPredicted RBP6.17□□□□□ -1.42
CD44-232ENST00000531118 GLYATQ6IB77 296 aa6.17□□□□□ -1.42
CD44-232ENST00000531118 C8orf82Q6P1X6 216 aaPredicted RBP6.17□□□□□ -1.42
CD44-232ENST00000531118 TEPPQ6URK8 271 aa6.17□□□□□ -1.42
CD44-232ENST00000531118 ZNF575Q86XF7 245 aa6.17□□□□□ -1.42
CD44-232ENST00000531118 PLPPR1Q8TBJ4 325 aa6.17□□□□□ -1.42
CD44-232ENST00000531118 RFT1Q96AA3 541 aa6.17□□□□□ -1.42
CD44-232ENST00000531118 MCUR1Q96AQ8 359 aa6.17□□□□□ -1.42
CD44-232ENST00000531118 CMTM5Q96DZ9 223 aa6.17□□□□□ -1.42
CD44-232ENST00000531118 HOPXQ9BPY8 73 aaPredicted RBP6.17□□□□□ -1.42
CD44-232ENST00000531118 GGTLC1Q9BX51 225 aa6.17□□□□□ -1.42
CD44-232ENST00000531118 ANKRD60Q9BZ19 345 aa6.17□□□□□ -1.42
CD44-232ENST00000531118 YIPF3Q9GZM5 350 aa6.17□□□□□ -1.42
CD44-232ENST00000531118 NCOR1P1Q9H4R4 102 aa6.17□□□□□ -1.42
CD44-232ENST00000531118 ABCD2Q9UBJ2 740 aa6.17□□□□□ -1.42
CD44-232ENST00000531118 SLC23A1Q9UHI7 598 aa6.17□□□□□ -1.42
CD44-232ENST00000531118 MYRFQ9Y2G1 1151 aa6.17□□□□□ -1.42
CD44-232ENST00000531118 MYCBP2O75592 4640 aa6.16□□□□□ -1.42
CD44-232ENST00000531118 TRAV39A0A0B4J263 110 aa6.16□□□□□ -1.42
CD44-232ENST00000531118 OR11H12B2RN74 326 aa6.16□□□□□ -1.42
CD44-232ENST00000531118 TNFRSF11BO00300 401 aa6.16□□□□□ -1.42
CD44-232ENST00000531118 NBR2O15453 112 aa6.16□□□□□ -1.42
CD44-232ENST00000531118 GMNNO75496 209 aa6.16□□□□□ -1.42
CD44-232ENST00000531118 PLA2G1BP04054 148 aaKnown RBP6.16□□□□□ -1.42
CD44-232ENST00000531118 COX4I1P13073 169 aa6.16□□□□□ -1.42
CD44-232ENST00000531118 VHLP40337 213 aa6.16□□□□□ -1.42
CD44-232ENST00000531118 ZNF137PP52743 207 aa6.16□□□□□ -1.42
CD44-232ENST00000531118 ACTBP60709 375 aa6.16□□□□□ -1.42
CD44-232ENST00000531118 KLF5Q13887 457 aaPredicted RBP6.16□□□□□ -1.42
CD44-232ENST00000531118 ODF4Q2M2E3 257 aa6.16□□□□□ -1.42
CD44-232ENST00000531118 C5orf64Q2M2E5 130 aa6.16□□□□□ -1.42
CD44-232ENST00000531118 PAN3Q58A45 887 aaKnown RBP6.16□□□□□ -1.42
CD44-232ENST00000531118 CGB2Q6NT52 195 aa6.16□□□□□ -1.42
CD44-232ENST00000531118 FAHD1Q6P587 224 aa6.16□□□□□ -1.42
CD44-232ENST00000531118 C8orf31Q8N9H6 132 aa6.16□□□□□ -1.42
CD44-232ENST00000531118 ZNF565Q8N9K5 539 aa6.16□□□□□ -1.42
CD44-232ENST00000531118 DNAAF1Q8NEP3 725 aa6.16□□□□□ -1.42
CD44-232ENST00000531118 ASB17Q8WXJ9 295 aa6.16□□□□□ -1.42
CD44-232ENST00000531118 PYURFQ96I23 114 aa6.16□□□□□ -1.42
CD44-232ENST00000531118 MS4A10Q96PG2 267 aa6.16□□□□□ -1.42
CD44-232ENST00000531118 ELAC2Q9BQ52 826 aaKnown RBP6.16□□□□□ -1.42
CD44-232ENST00000531118 DGCR6LQ9BY27 220 aa6.16□□□□□ -1.42
CD44-232ENST00000531118 FAM107BQ9H098 131 aa6.16□□□□□ -1.42
CD44-232ENST00000531118 RANGRFQ9HD47 186 aaPredicted RBP6.16□□□□□ -1.42
CD44-232ENST00000531118 IGHV3-43A0A0B4J1X8 118 aa6.15□□□□□ -1.42
CD44-232ENST00000531118 IGKV1-9A0A0C4DH69 117 aa6.15□□□□□ -1.42
CD44-232ENST00000531118 LOC107986453A0A1B0GWG9 222 aa6.15□□□□□ -1.42
CD44-232ENST00000531118 CCDC182A6NF36 153 aa6.15□□□□□ -1.42
CD44-232ENST00000531118 PRSS29PA6NIE9 313 aa6.15□□□□□ -1.42
CD44-232ENST00000531118 H0YJX3 145 aa6.15□□□□□ -1.42
CD44-232ENST00000531118 SDCBPO00560 298 aaPredicted RBP6.15□□□□□ -1.42
CD44-232ENST00000531118 MAGEB4O15481 346 aaPredicted RBP6.15□□□□□ -1.42
CD44-232ENST00000531118 SYT7O43581 403 aa6.15□□□□□ -1.42
CD44-232ENST00000531118 NDUFA3O95167 84 aa6.15□□□□□ -1.42
CD44-232ENST00000531118 APOL3O95236 402 aa6.15□□□□□ -1.42
CD44-232ENST00000531118 IGHV3-43DP0DP04 118 aa6.15□□□□□ -1.42
CD44-232ENST00000531118 ALDH3A2P51648 485 aa6.15□□□□□ -1.42
CD44-232ENST00000531118 MTCP1P56278 107 aa6.15□□□□□ -1.42
CD44-232ENST00000531118 ZNF45Q02386 682 aa6.15□□□□□ -1.42
CD44-232ENST00000531118 PAX5Q02548 391 aa6.15□□□□□ -1.42
CD44-232ENST00000531118 PDZK1IP1Q13113 114 aa6.15□□□□□ -1.42
CD44-232ENST00000531118 CDK5R1Q15078 307 aa6.15□□□□□ -1.42
CD44-232ENST00000531118 CD300EQ496F6 205 aaPredicted RBP6.15□□□□□ -1.42
CD44-232ENST00000531118 TMEM177Q53S58 311 aa6.15□□□□□ -1.42
CD44-232ENST00000531118 CD200R1LQ6Q8B3 271 aa6.15□□□□□ -1.42
CD44-232ENST00000531118 SLC25A48Q6ZT89 311 aaKnown RBP6.15□□□□□ -1.42
CD44-232ENST00000531118 CPOQ8IVL8 374 aa6.15□□□□□ -1.42
CD44-232ENST00000531118 RDH10Q8IZV5 341 aa6.15□□□□□ -1.42
CD44-232ENST00000531118 OR5D18Q8NGL1 313 aa6.15□□□□□ -1.42
CD44-232ENST00000531118 UBALD1Q8TB05 177 aa6.15□□□□□ -1.42
CD44-232ENST00000531118 ABHD5Q8WTS1 349 aa6.15□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 65.2 ms