RNA–Protein interactions for RNA: ENST00000531042.5

CPSF1-205, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 580 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-205ENST00000531042 STX19Q8N4C7 294 aa12.44□□□□□ -0.42
CPSF1-205ENST00000531042 Q8N9W7 124 aa12.44□□□□□ -0.42
CPSF1-205ENST00000531042 TMEM104Q8NE00 496 aa12.44□□□□□ -0.42
CPSF1-205ENST00000531042 SETD9Q8NE22 299 aa12.44□□□□□ -0.42
CPSF1-205ENST00000531042 OR2T10Q8NGZ9 312 aa12.44□□□□□ -0.42
CPSF1-205ENST00000531042 CYGBQ8WWM9 190 aa12.44□□□□□ -0.42
CPSF1-205ENST00000531042 RTN4IP1Q8WWV3 396 aaPredicted RBP12.44□□□□□ -0.42
CPSF1-205ENST00000531042 GGHQ92820 318 aa12.44□□□□□ -0.42
CPSF1-205ENST00000531042 MUL1Q969V5 352 aa12.44□□□□□ -0.42
CPSF1-205ENST00000531042 MRPS24Q96EL2 167 aaKnown RBP12.44□□□□□ -0.42
CPSF1-205ENST00000531042 GPR61Q9BZJ8 451 aa12.44□□□□□ -0.42
CPSF1-205ENST00000531042 ABCG5Q9H222 651 aa12.44□□□□□ -0.42
CPSF1-205ENST00000531042 SPACA1Q9HBV2 294 aa12.44□□□□□ -0.42
CPSF1-205ENST00000531042 MRPS28Q9Y2Q9 187 aaKnown RBP12.44□□□□□ -0.42
CPSF1-205ENST00000531042 TRBV5-7A0A0A0MS05 114 aa12.43□□□□□ -0.42
CPSF1-205ENST00000531042 NUDT19A8MXV4 375 aa12.43□□□□□ -0.42
CPSF1-205ENST00000531042 C12orf77C9JDV5 145 aa12.43□□□□□ -0.42
CPSF1-205ENST00000531042 MCRIP1C9JLW8 97 aa12.43□□□□□ -0.42
CPSF1-205ENST00000531042 CD1BP29016 333 aa12.43□□□□□ -0.42
CPSF1-205ENST00000531042 MYCNOSP40205 109 aa12.43□□□□□ -0.42
CPSF1-205ENST00000531042 GPR12P47775 334 aa12.43□□□□□ -0.42
CPSF1-205ENST00000531042 LRRC36Q1X8D7 754 aa12.43□□□□□ -0.42
CPSF1-205ENST00000531042 DEFB121Q5J5C9 76 aa12.43□□□□□ -0.42
CPSF1-205ENST00000531042 SYT6Q5T7P8 510 aaPredicted RBP12.43□□□□□ -0.42
CPSF1-205ENST00000531042 GLIPR1L1Q6UWM5 242 aa12.43□□□□□ -0.42
CPSF1-205ENST00000531042 JAGN1Q8N5M9 183 aa12.43□□□□□ -0.42
CPSF1-205ENST00000531042 ZNF439Q8NDP4 499 aa12.43□□□□□ -0.42
CPSF1-205ENST00000531042 KLHL30-AS1Q8NEE0 82 aa12.43□□□□□ -0.42
CPSF1-205ENST00000531042 OR14A2Q96R54 314 aa12.43□□□□□ -0.42
CPSF1-205ENST00000531042 PLSCR3Q9NRY6 295 aa12.43□□□□□ -0.42
CPSF1-205ENST00000531042 LIN7CQ9NUP9 197 aaKnown RBP12.43□□□□□ -0.42
CPSF1-205ENST00000531042 TRAPPC2LQ9UL33 140 aa12.43□□□□□ -0.42
CPSF1-205ENST00000531042 A0A1W2PPK0 400 aa12.42□□□□□ -0.42
CPSF1-205ENST00000531042 AP4M1O00189 453 aa12.42□□□□□ -0.42
CPSF1-205ENST00000531042 SLC31A2O15432 143 aa12.42□□□□□ -0.42
CPSF1-205ENST00000531042 SPINT2O43291 252 aa12.42□□□□□ -0.42
CPSF1-205ENST00000531042 ZNF134P52741 427 aa12.42□□□□□ -0.42
CPSF1-205ENST00000531042 ADARB1P78563 741 aaKnown RBP12.42□□□□□ -0.42
CPSF1-205ENST00000531042 ST3GAL4Q11206 333 aa12.42□□□□□ -0.42
CPSF1-205ENST00000531042 RAB12Q6IQ22 244 aa12.42□□□□□ -0.42
CPSF1-205ENST00000531042 TEX38Q6PEX7 206 aa12.42□□□□□ -0.42
CPSF1-205ENST00000531042 SLC25A48Q6ZT89 311 aaKnown RBP12.42□□□□□ -0.42
CPSF1-205ENST00000531042 CDH26Q8IXH8 852 aa12.42□□□□□ -0.42
CPSF1-205ENST00000531042 GAPTQ8N292 157 aa12.42□□□□□ -0.42
CPSF1-205ENST00000531042 DHRSXQ8N5I4 330 aa12.42□□□□□ -0.42
CPSF1-205ENST00000531042 OR4K15Q8NH41 348 aa12.42□□□□□ -0.42
CPSF1-205ENST00000531042 DPF1Q92782 380 aa12.42□□□□□ -0.42
CPSF1-205ENST00000531042 P2RX4Q99571 388 aa12.42□□□□□ -0.42
CPSF1-205ENST00000531042 MCRIP2Q9BUT9 160 aaKnown RBP12.42□□□□□ -0.42
CPSF1-205ENST00000531042 RAB9BQ9NP90 201 aa12.42□□□□□ -0.42
CPSF1-205ENST00000531042 ETAA1Q9NY74 926 aa12.42□□□□□ -0.42
CPSF1-205ENST00000531042 ZNF736B4DX44 427 aaPredicted RBP12.41□□□□□ -0.42
CPSF1-205ENST00000531042 MOSP00540 346 aa12.41□□□□□ -0.42
CPSF1-205ENST00000531042 MAS1P04201 325 aa12.41□□□□□ -0.42
CPSF1-205ENST00000531042 ZNF137PP52743 207 aa12.41□□□□□ -0.42
CPSF1-205ENST00000531042 TAS2R43P59537 309 aa12.41□□□□□ -0.42
CPSF1-205ENST00000531042 PNLIPRP3Q17RR3 467 aa12.41□□□□□ -0.42
CPSF1-205ENST00000531042 TMEM30BQ3MIR4 351 aa12.41□□□□□ -0.42
CPSF1-205ENST00000531042 CT45A1Q5HYN5 189 aa12.41□□□□□ -0.42
CPSF1-205ENST00000531042 C6orf183Q5T699 404 aa12.41□□□□□ -0.42
CPSF1-205ENST00000531042 AWAT2Q6E213 333 aa12.41□□□□□ -0.42
CPSF1-205ENST00000531042 LYPD6Q86Y78 171 aa12.41□□□□□ -0.42
CPSF1-205ENST00000531042 ZNF695Q8IW36 515 aa12.41□□□□□ -0.42
CPSF1-205ENST00000531042 PACRGLQ8N7B6 248 aa12.41□□□□□ -0.42
CPSF1-205ENST00000531042 CT45A3Q8NHU0 189 aa12.41□□□□□ -0.42
CPSF1-205ENST00000531042 DERL3Q96Q80 235 aa12.41□□□□□ -0.42
CPSF1-205ENST00000531042 S1PR3Q99500 378 aa12.41□□□□□ -0.42
CPSF1-205ENST00000531042 BANF2Q9H503 90 aa12.41□□□□□ -0.42
CPSF1-205ENST00000531042 C8orf4Q9NR00 106 aa12.41□□□□□ -0.42
CPSF1-205ENST00000531042 GNG12Q9UBI6 72 aa12.41□□□□□ -0.42
CPSF1-205ENST00000531042 PEX16Q9Y5Y5 336 aa12.41□□□□□ -0.42
CPSF1-205ENST00000531042 PNMA8CA0A1B0GUJ8 204 aa12.4□□□□□ -0.42
CPSF1-205ENST00000531042 FAM90A10PA6NDY2 464 aa12.4□□□□□ -0.42
CPSF1-205ENST00000531042 EFCAB10A6NFE3 127 aa12.4□□□□□ -0.42
CPSF1-205ENST00000531042 FAM90A7PA6NKC0 464 aa12.4□□□□□ -0.42
CPSF1-205ENST00000531042 FAM90A23PA8MXZ1 464 aa12.4□□□□□ -0.42
CPSF1-205ENST00000531042 TXNL1O43396 289 aa12.4□□□□□ -0.42
CPSF1-205ENST00000531042 SC5DO75845 299 aa12.4□□□□□ -0.42
CPSF1-205ENST00000531042 HBZP02008 142 aa12.4□□□□□ -0.42
CPSF1-205ENST00000531042 MGMTP16455 207 aa12.4□□□□□ -0.42
CPSF1-205ENST00000531042 RCC1P18754 421 aaPredicted RBP12.4□□□□□ -0.42
CPSF1-205ENST00000531042 CAPGP40121 348 aa12.4□□□□□ -0.42
CPSF1-205ENST00000531042 VHLP40337 213 aa12.4□□□□□ -0.42
CPSF1-205ENST00000531042 DOC2BQ14184 412 aa12.4□□□□□ -0.42
CPSF1-205ENST00000531042 VAX1Q5SQQ9 334 aa12.4□□□□□ -0.42
CPSF1-205ENST00000531042 PRR18Q8N4B5 295 aa12.4□□□□□ -0.42
CPSF1-205ENST00000531042 OR8H1Q8NGG4 311 aa12.4□□□□□ -0.42
CPSF1-205ENST00000531042 OR10V1Q8NGI7 309 aa12.4□□□□□ -0.42
CPSF1-205ENST00000531042 OR1L1Q8NH94 360 aa12.4□□□□□ -0.42
CPSF1-205ENST00000531042 DUX3Q96PT4 197 aa12.4□□□□□ -0.42
CPSF1-205ENST00000531042 RASL11BQ9BPW5 248 aa12.4□□□□□ -0.42
CPSF1-205ENST00000531042 GON7Q9BXV9 100 aa12.4□□□□□ -0.42
CPSF1-205ENST00000531042 SELENOIQ9C0D9 397 aa12.4□□□□□ -0.42
CPSF1-205ENST00000531042 DCLRE1BQ9H816 532 aa12.4□□□□□ -0.42
CPSF1-205ENST00000531042 CNOT2Q9NZN8 540 aaKnown RBP12.4□□□□□ -0.42
CPSF1-205ENST00000531042 ANKRD65E5RJM6 399 aa12.39□□□□□ -0.43
CPSF1-205ENST00000531042 H0YHG0 523 aa12.39□□□□□ -0.43
CPSF1-205ENST00000531042 CA11O75493 328 aa12.39□□□□□ -0.43
CPSF1-205ENST00000531042 RPLP1P05386 114 aaKnown RBP12.39□□□□□ -0.43
CPSF1-205ENST00000531042 CD1AP06126 327 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms