RNA–Protein interactions for RNA: ENST00000530395.1

SMPD1-204, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 5

Gene SMPD1, Length 447 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-204ENST00000530395 K7EIL1 84 aa16.5■□□□□ 0.23
SMPD1-204ENST00000530395 AP4M1O00189 453 aa16.5■□□□□ 0.23
SMPD1-204ENST00000530395 TXNL1O43396 289 aa16.5■□□□□ 0.23
SMPD1-204ENST00000530395 IGHV3-43DP0DP04 118 aa16.5■□□□□ 0.23
SMPD1-204ENST00000530395 THBS3P49746 956 aa16.5■□□□□ 0.23
SMPD1-204ENST00000530395 RPS11P62280 158 aaKnown RBP eCLIP16.5■□□□□ 0.23
SMPD1-204ENST00000530395 LRRC36Q1X8D7 754 aa16.5■□□□□ 0.23
SMPD1-204ENST00000530395 AWAT2Q6E213 333 aa16.5■□□□□ 0.23
SMPD1-204ENST00000530395 GLIPR1L1Q6UWM5 242 aa16.5■□□□□ 0.23
SMPD1-204ENST00000530395 ETV3LQ6ZN32 361 aa16.5■□□□□ 0.23
SMPD1-204ENST00000530395 C8orf86Q6ZUL3 223 aa16.5■□□□□ 0.23
SMPD1-204ENST00000530395 PACRGLQ8N7B6 248 aa16.5■□□□□ 0.23
SMPD1-204ENST00000530395 KLHL30-AS1Q8NEE0 82 aa16.5■□□□□ 0.23
SMPD1-204ENST00000530395 RTN4IP1Q8WWV3 396 aaPredicted RBP16.5■□□□□ 0.23
SMPD1-204ENST00000530395 OR14A2Q96R54 314 aa16.5■□□□□ 0.23
SMPD1-204ENST00000530395 MCRIP2Q9BUT9 160 aaKnown RBP16.5■□□□□ 0.23
SMPD1-204ENST00000530395 GON7Q9BXV9 100 aa16.5■□□□□ 0.23
SMPD1-204ENST00000530395 LIN7CQ9NUP9 197 aaKnown RBP16.5■□□□□ 0.23
SMPD1-204ENST00000530395 ETAA1Q9NY74 926 aa16.5■□□□□ 0.23
SMPD1-204ENST00000530395 GNG12Q9UBI6 72 aa16.5■□□□□ 0.23
SMPD1-204ENST00000530395 TRBV5-7A0A0A0MS05 114 aa16.49■□□□□ 0.23
SMPD1-204ENST00000530395 EFCAB10A6NFE3 127 aa16.49■□□□□ 0.23
SMPD1-204ENST00000530395 C12orf77C9JDV5 145 aa16.49■□□□□ 0.23
SMPD1-204ENST00000530395 CD1BP29016 333 aa16.49■□□□□ 0.23
SMPD1-204ENST00000530395 ST3GAL4Q11206 333 aa16.49■□□□□ 0.23
SMPD1-204ENST00000530395 SYT6Q5T7P8 510 aaPredicted RBP16.49■□□□□ 0.23
SMPD1-204ENST00000530395 RAB12Q6IQ22 244 aa16.49■□□□□ 0.23
SMPD1-204ENST00000530395 TRAT1Q6PIZ9 186 aa16.49■□□□□ 0.23
SMPD1-204ENST00000530395 CDH26Q8IXH8 852 aa16.49■□□□□ 0.23
SMPD1-204ENST00000530395 DHRSXQ8N5I4 330 aa16.49■□□□□ 0.23
SMPD1-204ENST00000530395 Q8N6K4 173 aa16.49■□□□□ 0.23
SMPD1-204ENST00000530395 A0A1W2PPK0 400 aa16.48■□□□□ 0.23
SMPD1-204ENST00000530395 MOSP00540 346 aa16.48■□□□□ 0.23
SMPD1-204ENST00000530395 MAS1P04201 325 aa16.48■□□□□ 0.23
SMPD1-204ENST00000530395 HOXD3P31249 432 aaPredicted RBP16.48■□□□□ 0.23
SMPD1-204ENST00000530395 MYCNOSP40205 109 aa16.48■□□□□ 0.23
SMPD1-204ENST00000530395 GPR12P47775 334 aa16.48■□□□□ 0.23
SMPD1-204ENST00000530395 KRTAP10-11P60412 298 aa16.48■□□□□ 0.23
SMPD1-204ENST00000530395 EGFEM1PQ0D2K5 195 aa16.48■□□□□ 0.23
SMPD1-204ENST00000530395 TEX38Q6PEX7 206 aa16.48■□□□□ 0.23
SMPD1-204ENST00000530395 ZNF695Q8IW36 515 aa16.48■□□□□ 0.23
SMPD1-204ENST00000530395 ZNF485Q8NCK3 441 aa16.48■□□□□ 0.23
SMPD1-204ENST00000530395 OR8H1Q8NGG4 311 aa16.48■□□□□ 0.23
SMPD1-204ENST00000530395 THRSPQ92748 146 aa16.48■□□□□ 0.23
SMPD1-204ENST00000530395 GGHQ92820 318 aa16.48■□□□□ 0.23
SMPD1-204ENST00000530395 ST6GALNAC6Q969X2 333 aa16.48■□□□□ 0.23
SMPD1-204ENST00000530395 ABCG5Q9H222 651 aa16.48■□□□□ 0.23
SMPD1-204ENST00000530395 PEX16Q9Y5Y5 336 aa16.48■□□□□ 0.23
SMPD1-204ENST00000530395 DNAH9Q9NYC9 4486 aa16.48■□□□□ 0.23
SMPD1-204ENST00000530395 PNMA8CA0A1B0GUJ8 204 aa16.47■□□□□ 0.23
SMPD1-204ENST00000530395 FAM90A10PA6NDY2 464 aa16.47■□□□□ 0.23
SMPD1-204ENST00000530395 FAM90A7PA6NKC0 464 aa16.47■□□□□ 0.23
SMPD1-204ENST00000530395 FAM90A23PA8MXZ1 464 aa16.47■□□□□ 0.23
SMPD1-204ENST00000530395 MYL12BO14950 172 aa16.47■□□□□ 0.23
SMPD1-204ENST00000530395 RRP9O43818 475 aaKnown RBP16.47■□□□□ 0.23
SMPD1-204ENST00000530395 CA11O75493 328 aa16.47■□□□□ 0.23
SMPD1-204ENST00000530395 CAPGP40121 348 aa16.47■□□□□ 0.23
SMPD1-204ENST00000530395 ADARB1P78563 741 aaKnown RBP16.47■□□□□ 0.23
SMPD1-204ENST00000530395 DOC2BQ14184 412 aa16.47■□□□□ 0.23
SMPD1-204ENST00000530395 DEFB121Q5J5C9 76 aa16.47■□□□□ 0.23
SMPD1-204ENST00000530395 SLC25A48Q6ZT89 311 aaKnown RBP16.47■□□□□ 0.23
SMPD1-204ENST00000530395 PRR18Q8N4B5 295 aa16.47■□□□□ 0.23
SMPD1-204ENST00000530395 NKAIN3Q8N8D7 197 aa16.47■□□□□ 0.23
SMPD1-204ENST00000530395 Q8N9W7 124 aa16.47■□□□□ 0.23
SMPD1-204ENST00000530395 TMEM104Q8NE00 496 aa16.47■□□□□ 0.23
SMPD1-204ENST00000530395 OR4K15Q8NH41 348 aa16.47■□□□□ 0.23
SMPD1-204ENST00000530395 DERL3Q96Q80 235 aa16.47■□□□□ 0.23
SMPD1-204ENST00000530395 RASL11BQ9BPW5 248 aa16.47■□□□□ 0.23
SMPD1-204ENST00000530395 SELENOIQ9C0D9 397 aa16.47■□□□□ 0.23
SMPD1-204ENST00000530395 CNOT2Q9NZN8 540 aaKnown RBP16.47■□□□□ 0.23
SMPD1-204ENST00000530395 WI2-2373I1.2A0A1W2PRP0 233 aa16.46■□□□□ 0.23
SMPD1-204ENST00000530395 CRTAPO75718 401 aaPredicted RBP16.46■□□□□ 0.23
SMPD1-204ENST00000530395 MGMTP16455 207 aa16.46■□□□□ 0.23
SMPD1-204ENST00000530395 MAPK3P27361 379 aaPredicted RBP16.46■□□□□ 0.23
SMPD1-204ENST00000530395 ZNF137PP52743 207 aa16.46■□□□□ 0.23
SMPD1-204ENST00000530395 PNLIPRP3Q17RR3 467 aa16.46■□□□□ 0.23
SMPD1-204ENST00000530395 FAM53AQ6NSI3 398 aaPredicted RBP16.46■□□□□ 0.23
SMPD1-204ENST00000530395 C18orf65Q6ZTR6 163 aa16.46■□□□□ 0.23
SMPD1-204ENST00000530395 C8orf59Q8N0T1 100 aaPredicted RBP16.46■□□□□ 0.23
SMPD1-204ENST00000530395 GAPTQ8N292 157 aa16.46■□□□□ 0.23
SMPD1-204ENST00000530395 ZNF439Q8NDP4 499 aa16.46■□□□□ 0.23
SMPD1-204ENST00000530395 OR10V1Q8NGI7 309 aa16.46■□□□□ 0.23
SMPD1-204ENST00000530395 BANF2Q9H503 90 aa16.46■□□□□ 0.23
SMPD1-204ENST00000530395 ZMAT5Q9UDW3 170 aaKnown RBP16.46■□□□□ 0.23
SMPD1-204ENST00000530395 LINC01548A6NM66 108 aa16.45■□□□□ 0.22
SMPD1-204ENST00000530395 SLC31A2O15432 143 aa16.45■□□□□ 0.22
SMPD1-204ENST00000530395 HBZP02008 142 aa16.45■□□□□ 0.22
SMPD1-204ENST00000530395 GLAP06280 429 aa16.45■□□□□ 0.22
SMPD1-204ENST00000530395 CELP19835 753 aa16.45■□□□□ 0.22
SMPD1-204ENST00000530395 CXorf66Q5JRM2 361 aaPredicted RBP16.45■□□□□ 0.22
SMPD1-204ENST00000530395 UNQ9370/PRO34162Q6UXP9 181 aa16.45■□□□□ 0.22
SMPD1-204ENST00000530395 S1PR3Q99500 378 aa16.45■□□□□ 0.22
SMPD1-204ENST00000530395 P2RX4Q99571 388 aa16.45■□□□□ 0.22
SMPD1-204ENST00000530395 SC5DO75845 299 aa16.44■□□□□ 0.22
SMPD1-204ENST00000530395 CD1AP06126 327 aa16.44■□□□□ 0.22
SMPD1-204ENST00000530395 FUT3P21217 361 aa16.44■□□□□ 0.22
SMPD1-204ENST00000530395 GP2P55259 537 aaKnown RBP16.44■□□□□ 0.22
SMPD1-204ENST00000530395 WNT4P56705 351 aa16.44■□□□□ 0.22
SMPD1-204ENST00000530395 DCTN2Q13561 401 aaKnown RBP16.44■□□□□ 0.22
SMPD1-204ENST00000530395 GPR50Q13585 617 aa16.44■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 78.6 ms