RNA–Protein interactions for RNA: ENST00000530004.5

TTC39A-216, Transcript of tetratricopeptide repeat domain 39A, humanhuman

TSL 1 (best) BASIC

Gene TTC39A, Length 1,780 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39A-216ENST00000530004 LYG2Q86SG7 212 aa11.99□□□□□ -0.49
TTC39A-216ENST00000530004 LRRC75A-AS1Q8N1F1 130 aa11.99□□□□□ -0.49
TTC39A-216ENST00000530004 PRR18Q8N4B5 295 aa11.99□□□□□ -0.49
TTC39A-216ENST00000530004 TPRX1Q8N7U7 411 aa11.99□□□□□ -0.49
TTC39A-216ENST00000530004 ZNRF1Q8ND25 227 aa11.99□□□□□ -0.49
TTC39A-216ENST00000530004 TMEM185AQ8NFB2 350 aa11.99□□□□□ -0.49
TTC39A-216ENST00000530004 TMEM230Q96A57 120 aa11.99□□□□□ -0.49
TTC39A-216ENST00000530004 CABLES2Q9BTV7 478 aa11.99□□□□□ -0.49
TTC39A-216ENST00000530004 TAF9BQ9HBM6 251 aa11.99□□□□□ -0.49
TTC39A-216ENST00000530004 MGAT4CQ9UBM8 478 aa11.99□□□□□ -0.49
TTC39A-216ENST00000530004 CENPEQ02224 2701 aa11.99□□□□□ -0.49
TTC39A-216ENST00000530004 C9orf170A2RU37 121 aa11.98□□□□□ -0.49
TTC39A-216ENST00000530004 MGST3O14880 152 aa11.98□□□□□ -0.49
TTC39A-216ENST00000530004 DIRAS3O95661 229 aa11.98□□□□□ -0.49
TTC39A-216ENST00000530004 PPYP01298 95 aa11.98□□□□□ -0.49
TTC39A-216ENST00000530004 CTSDP07339 412 aaPredicted RBP11.98□□□□□ -0.49
TTC39A-216ENST00000530004 ZNF728P0DKX0 622 aa11.98□□□□□ -0.49
TTC39A-216ENST00000530004 IL13RA1P78552 427 aa11.98□□□□□ -0.49
TTC39A-216ENST00000530004 PAX5Q02548 391 aa11.98□□□□□ -0.49
TTC39A-216ENST00000530004 HMGN3Q15651 99 aa11.98□□□□□ -0.49
TTC39A-216ENST00000530004 C11orf91Q3C1V1 193 aa11.98□□□□□ -0.49
TTC39A-216ENST00000530004 TMEM128Q5BJH2 165 aa11.98□□□□□ -0.49
TTC39A-216ENST00000530004 TCTE3Q8IZS6 198 aa11.98□□□□□ -0.49
TTC39A-216ENST00000530004 ZNF561Q8N587 486 aa11.98□□□□□ -0.49
TTC39A-216ENST00000530004 IL1F10Q8WWZ1 152 aa11.98□□□□□ -0.49
TTC39A-216ENST00000530004 SDSLQ96GA7 329 aa11.98□□□□□ -0.49
TTC39A-216ENST00000530004 KCNIP1Q9NZI2 227 aa11.98□□□□□ -0.49
TTC39A-216ENST00000530004 PCDHB10Q9UN67 800 aa11.98□□□□□ -0.49
TTC39A-216ENST00000530004 CSMD2Q7Z408 3487 aa11.98□□□□□ -0.49
TTC39A-216ENST00000530004 DYSFO75923 2080 aa11.98□□□□□ -0.49
TTC39A-216ENST00000530004 TRBV6-7A0A0A0MS04 114 aa11.97□□□□□ -0.49
TTC39A-216ENST00000530004 TRAV38-1A0A0B4J264 116 aa11.97□□□□□ -0.49
TTC39A-216ENST00000530004 FAM172BPA6NC97 362 aa11.97□□□□□ -0.49
TTC39A-216ENST00000530004 K7N7A8 449 aa11.97□□□□□ -0.49
TTC39A-216ENST00000530004 LGALS8O00214 317 aa11.97□□□□□ -0.49
TTC39A-216ENST00000530004 DHODHQ02127 395 aa11.97□□□□□ -0.49
TTC39A-216ENST00000530004 C12orf45Q8N5I9 185 aaPredicted RBP11.97□□□□□ -0.49
TTC39A-216ENST00000530004 ZNF525Q8N782 197 aa11.97□□□□□ -0.49
TTC39A-216ENST00000530004 OR2AK2Q8NG84 335 aa11.97□□□□□ -0.49
TTC39A-216ENST00000530004 OR10J5Q8NHC4 309 aa11.97□□□□□ -0.49
TTC39A-216ENST00000530004 UBALD1Q8TB05 177 aa11.97□□□□□ -0.49
TTC39A-216ENST00000530004 ZFAND1Q8TCF1 268 aa11.97□□□□□ -0.49
TTC39A-216ENST00000530004 GAFA1Q96PS6 74 aa11.97□□□□□ -0.49
TTC39A-216ENST00000530004 CCL13Q99616 98 aa11.97□□□□□ -0.49
TTC39A-216ENST00000530004 ZNF665Q9H7R5 613 aa11.97□□□□□ -0.49
TTC39A-216ENST00000530004 POLQO75417 2590 aa11.97□□□□□ -0.49
TTC39A-216ENST00000530004 PPIAL4EA0A075B759 164 aa11.97□□□□□ -0.49
TTC39A-216ENST00000530004 A0A1B0GW55 424 aa11.97□□□□□ -0.49
TTC39A-216ENST00000530004 PPIAL4DF5H284 164 aa11.97□□□□□ -0.49
TTC39A-216ENST00000530004 TUSC2O75896 110 aa11.97□□□□□ -0.49
TTC39A-216ENST00000530004 DUX4L2P0CJ85 424 aa11.97□□□□□ -0.49
TTC39A-216ENST00000530004 DUX4L3P0CJ86 424 aa11.97□□□□□ -0.49
TTC39A-216ENST00000530004 DUX4L4P0CJ87 422 aa11.97□□□□□ -0.49
TTC39A-216ENST00000530004 DUX4L5P0CJ88 424 aa11.97□□□□□ -0.49
TTC39A-216ENST00000530004 DUX4L6P0CJ89 424 aa11.97□□□□□ -0.49
TTC39A-216ENST00000530004 DUX4L7P0CJ90 424 aa11.97□□□□□ -0.49
TTC39A-216ENST00000530004 PPIAL4FP0DN26 164 aa11.97□□□□□ -0.49
TTC39A-216ENST00000530004 ANXA3P12429 323 aa11.97□□□□□ -0.49
TTC39A-216ENST00000530004 SELLP14151 372 aa11.97□□□□□ -0.49
TTC39A-216ENST00000530004 CD34P28906 385 aa11.97□□□□□ -0.49
TTC39A-216ENST00000530004 ZFP69Q49AA0 526 aa11.97□□□□□ -0.49
TTC39A-216ENST00000530004 DUX4L9Q6RFH8 374 aaPredicted RBP11.97□□□□□ -0.49
TTC39A-216ENST00000530004 ZNF788Q6ZQV5 615 aa11.97□□□□□ -0.49
TTC39A-216ENST00000530004 SLC38A6Q8IZM9 456 aa11.97□□□□□ -0.49
TTC39A-216ENST00000530004 SPICQ8N5J4 248 aa11.97□□□□□ -0.49
TTC39A-216ENST00000530004 MRGPRDQ8TDS7 321 aa11.97□□□□□ -0.49
TTC39A-216ENST00000530004 CASTOR1Q8WTX7 329 aa11.97□□□□□ -0.49
TTC39A-216ENST00000530004 CHODLQ9H9P2 273 aa11.97□□□□□ -0.49
TTC39A-216ENST00000530004 OR1A1Q9P1Q5 309 aa11.97□□□□□ -0.49
TTC39A-216ENST00000530004 DUX4Q9UBX2 424 aa11.97□□□□□ -0.49
TTC39A-216ENST00000530004 PPIAL4AQ9Y536 164 aa11.97□□□□□ -0.49
TTC39A-216ENST00000530004 APCP25054 2843 aa11.96□□□□□ -0.49
TTC39A-216ENST00000530004 C12orf77C9JDV5 145 aa11.96□□□□□ -0.49
TTC39A-216ENST00000530004 GOSR2O14653 212 aa11.96□□□□□ -0.49
TTC39A-216ENST00000530004 UCP3P55916 312 aa11.96□□□□□ -0.49
TTC39A-216ENST00000530004 SUPT4H1P63272 117 aaKnown RBP11.96□□□□□ -0.49
TTC39A-216ENST00000530004 C2orf68Q2NKX9 166 aa11.96□□□□□ -0.49
TTC39A-216ENST00000530004 C6orf183Q5T699 404 aa11.96□□□□□ -0.49
TTC39A-216ENST00000530004 OR5D13Q8NGL4 314 aa11.96□□□□□ -0.49
TTC39A-216ENST00000530004 OR13A1Q8NGR1 328 aa11.96□□□□□ -0.49
TTC39A-216ENST00000530004 MITD1Q8WV92 249 aa11.96□□□□□ -0.49
TTC39A-216ENST00000530004 ZNF436Q9C0F3 470 aaPredicted RBP11.96□□□□□ -0.49
TTC39A-216ENST00000530004 NAV2Q8IVL1 2488 aa11.96□□□□□ -0.49
TTC39A-216ENST00000530004 ODAMA1E959 279 aa11.95□□□□□ -0.5
TTC39A-216ENST00000530004 NKX6-3A6NJ46 265 aa11.95□□□□□ -0.5
TTC39A-216ENST00000530004 NPIPB11E5RHQ5 1161 aa11.95□□□□□ -0.5
TTC39A-216ENST00000530004 HSPA12AO43301 675 aa11.95□□□□□ -0.5
TTC39A-216ENST00000530004 SFT2D2O95562 160 aa11.95□□□□□ -0.5
TTC39A-216ENST00000530004 DUS4LO95620 317 aaKnown RBP11.95□□□□□ -0.5
TTC39A-216ENST00000530004 RPS2P15880 293 aaKnown RBP11.95□□□□□ -0.5
TTC39A-216ENST00000530004 P2RX3P56373 397 aa11.95□□□□□ -0.5
TTC39A-216ENST00000530004 EDDM3BP56851 147 aa11.95□□□□□ -0.5
TTC39A-216ENST00000530004 PIGPP57054 158 aa11.95□□□□□ -0.5
TTC39A-216ENST00000530004 TMEM33P57088 247 aa11.95□□□□□ -0.5
TTC39A-216ENST00000530004 ABCA11PQ4W5N1 156 aa11.95□□□□□ -0.5
TTC39A-216ENST00000530004 H1FOOQ8IZA3 346 aaPredicted RBP11.95□□□□□ -0.5
TTC39A-216ENST00000530004 FAM216BQ8N7L0 139 aa11.95□□□□□ -0.5
TTC39A-216ENST00000530004 OR1L1Q8NH94 360 aa11.95□□□□□ -0.5
TTC39A-216ENST00000530004 PHB2Q99623 299 aa11.95□□□□□ -0.5
TTC39A-216ENST00000530004 DNTTIP1Q9H147 329 aa11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 134.2 ms