RNA–Protein interactions for RNA: ENST00000529355.1

CTR9-204, Transcript of CTR9 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 2

Gene CTR9, Length 1,146 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTR9-204ENST00000529355 WDR55Q9H6Y2 383 aaPredicted RBP2.36□□□□□ -2.03
CTR9-204ENST00000529355 BEX1Q9HBH7 125 aa2.36□□□□□ -2.03
CTR9-204ENST00000529355 LYRM4Q9HD34 91 aa2.36□□□□□ -2.03
CTR9-204ENST00000529355 PXMP2Q9NR77 195 aa2.36□□□□□ -2.03
CTR9-204ENST00000529355 NLE1Q9NVX2 485 aaPredicted RBP2.36□□□□□ -2.03
CTR9-204ENST00000529355 SBDSQ9Y3A5 250 aaKnown RBP eCLIP2.36□□□□□ -2.03
CTR9-204ENST00000529355 TMEM56-RWDD3S4R434 201 aa2.36□□□□□ -2.03
CTR9-204ENST00000529355 E9PCH4 1651 aa2.36□□□□□ -2.03
CTR9-204ENST00000529355 QRICH2Q9H0J4 1663 aa2.36□□□□□ -2.03
CTR9-204ENST00000529355 ADGRB3O60242 1522 aa2.36□□□□□ -2.03
CTR9-204ENST00000529355 PPLO60437 1756 aa2.36□□□□□ -2.03
CTR9-204ENST00000529355 BICRAQ9NZM4 1560 aa2.36□□□□□ -2.03
CTR9-204ENST00000529355 BIVM-ERCC5R4GMW8 1640 aa2.35□□□□□ -2.03
CTR9-204ENST00000529355 ANKRD12Q6UB98 2062 aa2.35□□□□□ -2.03
CTR9-204ENST00000529355 NKTRP30414 1462 aaKnown RBP2.35□□□□□ -2.03
CTR9-204ENST00000529355 MBD5Q9P267 1494 aa2.35□□□□□ -2.03
CTR9-204ENST00000529355 A0A0X1KG70 313 aa2.35□□□□□ -2.03
CTR9-204ENST00000529355 C20orf202A1L168 122 aa2.35□□□□□ -2.03
CTR9-204ENST00000529355 C1orf196B1AJZ1 125 aa2.35□□□□□ -2.03
CTR9-204ENST00000529355 TRAPPC2LH3BP13 241 aa2.35□□□□□ -2.03
CTR9-204ENST00000529355 H3BSA7 217 aa2.35□□□□□ -2.03
CTR9-204ENST00000529355 CYB5BO43169 146 aa2.35□□□□□ -2.03
CTR9-204ENST00000529355 KLRC4O43908 158 aa2.35□□□□□ -2.03
CTR9-204ENST00000529355 RDH16O75452 317 aa2.35□□□□□ -2.03
CTR9-204ENST00000529355 SCO1O75880 301 aa2.35□□□□□ -2.03
CTR9-204ENST00000529355 TCRBP04435 133 aa2.35□□□□□ -2.03
CTR9-204ENST00000529355 C8GP07360 202 aa2.35□□□□□ -2.03
CTR9-204ENST00000529355 OR8U9P0C7N5 309 aa2.35□□□□□ -2.03
CTR9-204ENST00000529355 HIST1H1BP16401 226 aaKnown RBP2.35□□□□□ -2.03
CTR9-204ENST00000529355 HLA-GP17693 338 aa2.35□□□□□ -2.03
CTR9-204ENST00000529355 GGT1P19440 569 aa2.35□□□□□ -2.03
CTR9-204ENST00000529355 PVALBP20472 110 aaPredicted RBP2.35□□□□□ -2.03
CTR9-204ENST00000529355 IVDP26440 423 aa2.35□□□□□ -2.03
CTR9-204ENST00000529355 S100A2P29034 98 aa2.35□□□□□ -2.03
CTR9-204ENST00000529355 S100GP29377 79 aa2.35□□□□□ -2.03
CTR9-204ENST00000529355 KDELR2P33947 212 aa2.35□□□□□ -2.03
CTR9-204ENST00000529355 TTPAP49638 278 aa2.35□□□□□ -2.03
CTR9-204ENST00000529355 BTN3A2P78410 334 aa2.35□□□□□ -2.03
CTR9-204ENST00000529355 FAM3AP98173 230 aa2.35□□□□□ -2.03
CTR9-204ENST00000529355 ZNF616Q08AN1 781 aa2.35□□□□□ -2.03
CTR9-204ENST00000529355 ZNF816Q0VGE8 651 aaPredicted RBP2.35□□□□□ -2.03
CTR9-204ENST00000529355 OR7A5Q15622 319 aa2.35□□□□□ -2.03
CTR9-204ENST00000529355 TSNQ15631 228 aaKnown RBP2.35□□□□□ -2.03
CTR9-204ENST00000529355 MAPK14Q16539 360 aa2.35□□□□□ -2.03
CTR9-204ENST00000529355 TAF9Q16594 264 aa2.35□□□□□ -2.03
CTR9-204ENST00000529355 ALKBH6Q3KRA9 238 aa2.35□□□□□ -2.03
CTR9-204ENST00000529355 TMEM176BQ3YBM2 270 aaPredicted RBP2.35□□□□□ -2.03
CTR9-204ENST00000529355 GCSAMLQ5JQS6 135 aa2.35□□□□□ -2.03
CTR9-204ENST00000529355 IDNKQ5T6J7 187 aa2.35□□□□□ -2.03
CTR9-204ENST00000529355 STEAP4Q687X5 459 aa2.35□□□□□ -2.03
CTR9-204ENST00000529355 TMEM220Q6QAJ8 160 aa2.35□□□□□ -2.03
CTR9-204ENST00000529355 TMEM144Q7Z5S9 345 aa2.35□□□□□ -2.03
CTR9-204ENST00000529355 RAB43Q86YS6 212 aa2.35□□□□□ -2.03
CTR9-204ENST00000529355 C9orf62Q8N4C0 152 aa2.35□□□□□ -2.03
CTR9-204ENST00000529355 TMEM156Q8N614 296 aa2.35□□□□□ -2.03
CTR9-204ENST00000529355 LRRC52Q8N7C0 313 aa2.35□□□□□ -2.03
CTR9-204ENST00000529355 OR51F2Q8NH61 342 aa2.35□□□□□ -2.03
CTR9-204ENST00000529355 OR10A6Q8NH74 314 aa2.35□□□□□ -2.03
CTR9-204ENST00000529355 ASB13Q8WXK3 278 aa2.35□□□□□ -2.03
CTR9-204ENST00000529355 GHSRQ92847 366 aa2.35□□□□□ -2.03
CTR9-204ENST00000529355 CMTM5Q96DZ9 223 aa2.35□□□□□ -2.03
CTR9-204ENST00000529355 RSG1Q9BU20 258 aa2.35□□□□□ -2.03
CTR9-204ENST00000529355 C20orf24Q9BUV8 137 aa2.35□□□□□ -2.03
CTR9-204ENST00000529355 UGT2B28Q9BY64 529 aa2.35□□□□□ -2.03
CTR9-204ENST00000529355 FGF23Q9GZV9 251 aaPredicted RBP2.35□□□□□ -2.03
CTR9-204ENST00000529355 TMEM38AQ9H6F2 299 aa2.35□□□□□ -2.03
CTR9-204ENST00000529355 FBXO6Q9NRD1 293 aaPredicted RBP2.35□□□□□ -2.03
CTR9-204ENST00000529355 MRM2Q9UI43 246 aaKnown RBP2.35□□□□□ -2.03
CTR9-204ENST00000529355 FBXL3Q9UKT7 428 aa2.35□□□□□ -2.03
CTR9-204ENST00000529355 PCYT1BQ9Y5K3 369 aaPredicted RBP2.35□□□□□ -2.03
CTR9-204ENST00000529355 KDM5DQ9BY66 1539 aa2.35□□□□□ -2.03
CTR9-204ENST00000529355 ARHGEF12Q9NZN5 1544 aa2.35□□□□□ -2.03
CTR9-204ENST00000529355 HECW2Q9P2P5 1572 aa2.35□□□□□ -2.03
CTR9-204ENST00000529355 ZSWIM8A7E2V4 1837 aa2.35□□□□□ -2.03
CTR9-204ENST00000529355 TARBP1Q13395 1621 aaKnown RBP2.35□□□□□ -2.03
CTR9-204ENST00000529355 RNF17Q9BXT8 1623 aaKnown RBP2.35□□□□□ -2.03
CTR9-204ENST00000529355 PTPRFP10586 1907 aa2.34□□□□□ -2.03
CTR9-204ENST00000529355 PLXND1Q9Y4D7 1925 aa2.34□□□□□ -2.03
CTR9-204ENST00000529355 RGS12O14924 1447 aa2.34□□□□□ -2.03
CTR9-204ENST00000529355 TROQ12816 1431 aaPredicted RBP2.34□□□□□ -2.03
CTR9-204ENST00000529355 RIC1Q4ADV7 1423 aa2.34□□□□□ -2.03
CTR9-204ENST00000529355 DENND4BO75064 1496 aaPredicted RBP2.34□□□□□ -2.03
CTR9-204ENST00000529355 GRIN2AQ12879 1464 aa2.34□□□□□ -2.03
CTR9-204ENST00000529355 IQSEC2Q5JU85 1478 aa2.34□□□□□ -2.03
CTR9-204ENST00000529355 ARHGEF11O15085 1522 aa2.34□□□□□ -2.03
CTR9-204ENST00000529355 EFCAB6Q5THR3 1501 aa2.34□□□□□ -2.03
CTR9-204ENST00000529355 TGIF2-C20orf24A0A0A6YYL0 155 aa2.34□□□□□ -2.03
CTR9-204ENST00000529355 IGKV1-8A0A0C4DH67 115 aa2.34□□□□□ -2.03
CTR9-204ENST00000529355 TRBV11-1A0A0K0K1C0 115 aa2.34□□□□□ -2.03
CTR9-204ENST00000529355 PNMA8CA0A1B0GUJ8 204 aa2.34□□□□□ -2.03
CTR9-204ENST00000529355 H0YJW9 148 aa2.34□□□□□ -2.03
CTR9-204ENST00000529355 H7C417 338 aa2.34□□□□□ -2.03
CTR9-204ENST00000529355 DNASE2O00115 360 aaPredicted RBP2.34□□□□□ -2.03
CTR9-204ENST00000529355 SLC17A3O00476 420 aa2.34□□□□□ -2.03
CTR9-204ENST00000529355 CXCR6O00574 342 aa2.34□□□□□ -2.03
CTR9-204ENST00000529355 SOCS1O15524 211 aa2.34□□□□□ -2.03
CTR9-204ENST00000529355 ORC5O43913 435 aa2.34□□□□□ -2.03
CTR9-204ENST00000529355 MRPS14O60783 128 aaKnown RBP2.34□□□□□ -2.03
CTR9-204ENST00000529355 UPK1BO75841 260 aa2.34□□□□□ -2.03
CTR9-204ENST00000529355 PIAS1O75925 651 aa2.34□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms