RNA–Protein interactions for RNA: ENST00000529312.5

CCDC90B-212, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 5

Gene CCDC90B, Length 773 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-212ENST00000529312 SIRT4Q9Y6E7 314 aaPredicted RBP6.24□□□□□ -1.41
CCDC90B-212ENST00000529312 NOTCH1P46531 2555 aa6.24□□□□□ -1.41
CCDC90B-212ENST00000529312 PLXNB1O43157 2135 aa6.23□□□□□ -1.41
CCDC90B-212ENST00000529312 TRBV5-7A0A0A0MS05 114 aa6.23□□□□□ -1.41
CCDC90B-212ENST00000529312 NCBP2LA6PVI3 153 aaKnown RBP6.23□□□□□ -1.41
CCDC90B-212ENST00000529312 SERPINE3A8MV23 424 aa6.23□□□□□ -1.41
CCDC90B-212ENST00000529312 G3V4G9 280 aa6.23□□□□□ -1.41
CCDC90B-212ENST00000529312 H0YHG0 523 aa6.23□□□□□ -1.41
CCDC90B-212ENST00000529312 AIPO00170 330 aa6.23□□□□□ -1.41
CCDC90B-212ENST00000529312 TXNL1O43396 289 aa6.23□□□□□ -1.41
CCDC90B-212ENST00000529312 RGS11O94810 467 aa6.23□□□□□ -1.41
CCDC90B-212ENST00000529312 MAS1P04201 325 aa6.23□□□□□ -1.41
CCDC90B-212ENST00000529312 FSTP19883 344 aa6.23□□□□□ -1.41
CCDC90B-212ENST00000529312 GP2P55259 537 aaKnown RBP6.23□□□□□ -1.41
CCDC90B-212ENST00000529312 SLC35A2P78381 396 aa6.23□□□□□ -1.41
CCDC90B-212ENST00000529312 EBI3Q14213 229 aa6.23□□□□□ -1.41
CCDC90B-212ENST00000529312 HNF4GQ14541 408 aa6.23□□□□□ -1.41
CCDC90B-212ENST00000529312 RCN1Q15293 331 aa6.23□□□□□ -1.41
CCDC90B-212ENST00000529312 SYT6Q5T7P8 510 aaPredicted RBP6.23□□□□□ -1.41
CCDC90B-212ENST00000529312 GLT8D1Q68CQ7 371 aa6.23□□□□□ -1.41
CCDC90B-212ENST00000529312 AWAT2Q6E213 333 aa6.23□□□□□ -1.41
CCDC90B-212ENST00000529312 XAF1Q6GPH4 301 aa6.23□□□□□ -1.41
CCDC90B-212ENST00000529312 RAB12Q6IQ22 244 aa6.23□□□□□ -1.41
CCDC90B-212ENST00000529312 ZNF497Q6ZNH5 498 aa6.23□□□□□ -1.41
CCDC90B-212ENST00000529312 KRTAP19-1Q8IUB9 90 aa6.23□□□□□ -1.41
CCDC90B-212ENST00000529312 LYG1Q8N1E2 194 aa6.23□□□□□ -1.41
CCDC90B-212ENST00000529312 NANOGP1Q8N7R0 232 aa6.23□□□□□ -1.41
CCDC90B-212ENST00000529312 OR56B4Q8NH76 319 aa6.23□□□□□ -1.41
CCDC90B-212ENST00000529312 CCDC107Q8WV48 283 aa6.23□□□□□ -1.41
CCDC90B-212ENST00000529312 MUL1Q969V5 352 aa6.23□□□□□ -1.41
CCDC90B-212ENST00000529312 RCC1LQ96I51 464 aaKnown RBP6.23□□□□□ -1.41
CCDC90B-212ENST00000529312 NEDD4LQ96PU5 975 aa6.23□□□□□ -1.41
CCDC90B-212ENST00000529312 RASL11BQ9BPW5 248 aa6.23□□□□□ -1.41
CCDC90B-212ENST00000529312 CHCHD6Q9BRQ6 235 aa6.23□□□□□ -1.41
CCDC90B-212ENST00000529312 MCRIP2Q9BUT9 160 aaKnown RBP6.23□□□□□ -1.41
CCDC90B-212ENST00000529312 SELENOIQ9C0D9 397 aa6.23□□□□□ -1.41
CCDC90B-212ENST00000529312 CST11Q9H112 138 aa6.23□□□□□ -1.41
CCDC90B-212ENST00000529312 DCLRE1BQ9H816 532 aa6.23□□□□□ -1.41
CCDC90B-212ENST00000529312 GFOD1Q9NXC2 390 aa6.23□□□□□ -1.41
CCDC90B-212ENST00000529312 ETAA1Q9NY74 926 aa6.23□□□□□ -1.41
CCDC90B-212ENST00000529312 GNG12Q9UBI6 72 aa6.23□□□□□ -1.41
CCDC90B-212ENST00000529312 IGHV1-3A0A0C4DH29 117 aa6.22□□□□□ -1.41
CCDC90B-212ENST00000529312 A0A1W2PPK0 400 aa6.22□□□□□ -1.41
CCDC90B-212ENST00000529312 A0A1W2PRX2 142 aa6.22□□□□□ -1.41
CCDC90B-212ENST00000529312 PTGES3LE9PB15 166 aa6.22□□□□□ -1.41
CCDC90B-212ENST00000529312 C15orf65H3BRN8 121 aa6.22□□□□□ -1.41
CCDC90B-212ENST00000529312 HSD17B6O14756 317 aa6.22□□□□□ -1.41
CCDC90B-212ENST00000529312 CASQ2O14958 399 aaPredicted RBP6.22□□□□□ -1.41
CCDC90B-212ENST00000529312 RRP9O43818 475 aaKnown RBP6.22□□□□□ -1.41
CCDC90B-212ENST00000529312 CRTAPO75718 401 aaPredicted RBP6.22□□□□□ -1.41
CCDC90B-212ENST00000529312 BPNT1O95861 308 aa6.22□□□□□ -1.41
CCDC90B-212ENST00000529312 MOSP00540 346 aa6.22□□□□□ -1.41
CCDC90B-212ENST00000529312 IGKV1D-33P01593 117 aa6.22□□□□□ -1.41
CCDC90B-212ENST00000529312 IGKV1-33P01594 117 aa6.22□□□□□ -1.41
CCDC90B-212ENST00000529312 IGHV3-7P01780 117 aa6.22□□□□□ -1.41
CCDC90B-212ENST00000529312 IGHG2P01859 326 aa6.22□□□□□ -1.41
CCDC90B-212ENST00000529312 AMY1AP04745 511 aa6.22□□□□□ -1.41
CCDC90B-212ENST00000529312 AMY2AP04746 511 aa6.22□□□□□ -1.41
CCDC90B-212ENST00000529312 GNG10P50151 68 aa6.22□□□□□ -1.41
CCDC90B-212ENST00000529312 PSMD7P51665 324 aa6.22□□□□□ -1.41
CCDC90B-212ENST00000529312 RPS11P62280 158 aaKnown RBP eCLIP6.22□□□□□ -1.41
CCDC90B-212ENST00000529312 PNLIPRP3Q17RR3 467 aa6.22□□□□□ -1.41
CCDC90B-212ENST00000529312 ACSM3Q53FZ2 586 aa6.22□□□□□ -1.41
CCDC90B-212ENST00000529312 OXLD1Q5BKU9 147 aa6.22□□□□□ -1.41
CCDC90B-212ENST00000529312 KHDC1LQ5JSQ8 128 aa6.22□□□□□ -1.41
CCDC90B-212ENST00000529312 OGFRL1Q5TC84 451 aaPredicted RBP6.22□□□□□ -1.41
CCDC90B-212ENST00000529312 TEX38Q6PEX7 206 aa6.22□□□□□ -1.41
CCDC90B-212ENST00000529312 UNQ9370/PRO34162Q6UXP9 181 aa6.22□□□□□ -1.41
CCDC90B-212ENST00000529312 SLC35E3Q7Z769 313 aa6.22□□□□□ -1.41
CCDC90B-212ENST00000529312 TGIF2LXQ8IUE1 241 aa6.22□□□□□ -1.41
CCDC90B-212ENST00000529312 ZNF485Q8NCK3 441 aa6.22□□□□□ -1.41
CCDC90B-212ENST00000529312 KCNG3Q8TAE7 436 aa6.22□□□□□ -1.41
CCDC90B-212ENST00000529312 PHYHIPQ92561 330 aa6.22□□□□□ -1.41
CCDC90B-212ENST00000529312 DPF1Q92782 380 aa6.22□□□□□ -1.41
CCDC90B-212ENST00000529312 LEAP2Q969E1 77 aa6.22□□□□□ -1.41
CCDC90B-212ENST00000529312 EAF1Q96JC9 268 aaPredicted RBP6.22□□□□□ -1.41
CCDC90B-212ENST00000529312 PGLYRP3Q96LB9 341 aa6.22□□□□□ -1.41
CCDC90B-212ENST00000529312 OR14A2Q96R54 314 aa6.22□□□□□ -1.41
CCDC90B-212ENST00000529312 MND1Q9BWT6 205 aa6.22□□□□□ -1.41
CCDC90B-212ENST00000529312 GHITMQ9H3K2 345 aa6.22□□□□□ -1.41
CCDC90B-212ENST00000529312 RIMS4Q9H426 269 aaPredicted RBP6.22□□□□□ -1.41
CCDC90B-212ENST00000529312 OR2S2Q9NQN1 319 aa6.22□□□□□ -1.41
CCDC90B-212ENST00000529312 TPRKBQ9Y3C4 175 aa6.22□□□□□ -1.41
CCDC90B-212ENST00000529312 TRAV8-7A0A075B6U6 113 aa6.21□□□□□ -1.42
CCDC90B-212ENST00000529312 TRAV39A0A0B4J263 110 aa6.21□□□□□ -1.42
CCDC90B-212ENST00000529312 A0A1W2PPI3 338 aa6.21□□□□□ -1.42
CCDC90B-212ENST00000529312 ADARB2-AS1A8MUL3 147 aa6.21□□□□□ -1.42
CCDC90B-212ENST00000529312 AP4M1O00189 453 aa6.21□□□□□ -1.42
CCDC90B-212ENST00000529312 LALBAP00709 142 aa6.21□□□□□ -1.42
CCDC90B-212ENST00000529312 MGMTP16455 207 aa6.21□□□□□ -1.42
CCDC90B-212ENST00000529312 SRMP19623 302 aa6.21□□□□□ -1.42
CCDC90B-212ENST00000529312 SSTR5P35346 364 aa6.21□□□□□ -1.42
CCDC90B-212ENST00000529312 MYCNOSP40205 109 aa6.21□□□□□ -1.42
CCDC90B-212ENST00000529312 DCTN2Q13561 401 aaKnown RBP6.21□□□□□ -1.42
CCDC90B-212ENST00000529312 SPHARQ15513 63 aa6.21□□□□□ -1.42
CCDC90B-212ENST00000529312 TRAM1Q15629 374 aa6.21□□□□□ -1.42
CCDC90B-212ENST00000529312 LY6G6FQ5SQ64 297 aa6.21□□□□□ -1.42
CCDC90B-212ENST00000529312 C6orf141Q5SZD1 244 aa6.21□□□□□ -1.42
CCDC90B-212ENST00000529312 SLC25A48Q6ZT89 311 aaKnown RBP6.21□□□□□ -1.42
CCDC90B-212ENST00000529312 AHSA2Q719I0 299 aa6.21□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms