RNA–Protein interactions for RNA: ENST00000527920.5

SSSCA1-205, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 3 BASIC

Gene SSSCA1, Length 806 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-205ENST00000527920 ZNF554Q86TJ5 538 aa26.39■■□□□ 1.82
SSSCA1-205ENST00000527920 BLOC1S6Q9UL45 172 aa26.39■■□□□ 1.82
SSSCA1-205ENST00000527920 C12orf77C9JDV5 145 aa26.38■■□□□ 1.81
SSSCA1-205ENST00000527920 SLC22A1O15245 554 aa26.38■■□□□ 1.81
SSSCA1-205ENST00000527920 SPINT2O43291 252 aa26.38■■□□□ 1.81
SSSCA1-205ENST00000527920 PEX14O75381 377 aa26.38■■□□□ 1.81
SSSCA1-205ENST00000527920 HSMCR30P0CW71 290 aa26.38■■□□□ 1.81
SSSCA1-205ENST00000527920 CPEP16870 476 aa26.38■■□□□ 1.81
SSSCA1-205ENST00000527920 FBLN7Q53RD9 439 aa26.38■■□□□ 1.81
SSSCA1-205ENST00000527920 C11orf44Q8N8P7 122 aa26.38■■□□□ 1.81
SSSCA1-205ENST00000527920 FAM46BQ96A09 425 aa26.38■■□□□ 1.81
SSSCA1-205ENST00000527920 CCDC90BQ9GZT6 254 aa26.38■■□□□ 1.81
SSSCA1-205ENST00000527920 RAB26Q9ULW5 256 aa26.38■■□□□ 1.81
SSSCA1-205ENST00000527920 NOTCH1P46531 2555 aa26.38■■□□□ 1.81
SSSCA1-205ENST00000527920 VSIG8P0DPA2 414 aa26.37■■□□□ 1.81
SSSCA1-205ENST00000527920 ZNF816Q0VGE8 651 aaPredicted RBP26.37■■□□□ 1.81
SSSCA1-205ENST00000527920 TMEM91Q6ZNR0 172 aa26.37■■□□□ 1.81
SSSCA1-205ENST00000527920 KCNG3Q8TAE7 436 aa26.37■■□□□ 1.81
SSSCA1-205ENST00000527920 TMEM203Q969S6 136 aa26.37■■□□□ 1.81
SSSCA1-205ENST00000527920 MBNL3Q9NUK0 354 aaKnown RBP26.37■■□□□ 1.81
SSSCA1-205ENST00000527920 ARL6IP5O75915 188 aa26.36■■□□□ 1.81
SSSCA1-205ENST00000527920 MPIG6BO95866 241 aa26.36■■□□□ 1.81
SSSCA1-205ENST00000527920 AMY1AP04745 511 aa26.36■■□□□ 1.81
SSSCA1-205ENST00000527920 AMY2AP04746 511 aa26.36■■□□□ 1.81
SSSCA1-205ENST00000527920 VHLP40337 213 aa26.36■■□□□ 1.81
SSSCA1-205ENST00000527920 RPS27AP62979 156 aaKnown RBP26.36■■□□□ 1.81
SSSCA1-205ENST00000527920 TBCEQ15813 527 aaPredicted RBP26.36■■□□□ 1.81
SSSCA1-205ENST00000527920 OR6M1Q8NGM8 313 aa26.36■■□□□ 1.81
SSSCA1-205ENST00000527920 OR4K15Q8NH41 348 aa26.36■■□□□ 1.81
SSSCA1-205ENST00000527920 OR56B4Q8NH76 319 aa26.36■■□□□ 1.81
SSSCA1-205ENST00000527920 CNBD2Q96M20 576 aa26.36■■□□□ 1.81
SSSCA1-205ENST00000527920 MGLLQ99685 303 aa26.36■■□□□ 1.81
SSSCA1-205ENST00000527920 MOB4Q9Y3A3 225 aa26.36■■□□□ 1.81
SSSCA1-205ENST00000527920 HSD17B6O14756 317 aa26.35■■□□□ 1.81
SSSCA1-205ENST00000527920 HTR2CP28335 458 aa26.35■■□□□ 1.81
SSSCA1-205ENST00000527920 DRAM1Q8N682 238 aa26.35■■□□□ 1.81
SSSCA1-205ENST00000527920 TM2D1Q9BX74 207 aa26.35■■□□□ 1.81
SSSCA1-205ENST00000527920 TMEM59Q9BXS4 323 aa26.35■■□□□ 1.81
SSSCA1-205ENST00000527920 BPNT1O95861 308 aa26.34■■□□□ 1.81
SSSCA1-205ENST00000527920 SNRNP70P08621 437 aaKnown RBP26.34■■□□□ 1.81
SSSCA1-205ENST00000527920 CHATP28329 748 aa26.34■■□□□ 1.81
SSSCA1-205ENST00000527920 RPS25P62851 125 aaKnown RBP26.34■■□□□ 1.81
SSSCA1-205ENST00000527920 DIAPH2-AS1Q14236 149 aa26.34■■□□□ 1.81
SSSCA1-205ENST00000527920 TMEM95Q3KNT9 176 aa26.34■■□□□ 1.81
SSSCA1-205ENST00000527920 ABCA11PQ4W5N1 156 aa26.34■■□□□ 1.81
SSSCA1-205ENST00000527920 FAM110DQ8TAY7 271 aaPredicted RBP26.34■■□□□ 1.81
SSSCA1-205ENST00000527920 UBALD1Q8TB05 177 aa26.34■■□□□ 1.81
SSSCA1-205ENST00000527920 A0A1W2PPE3 182 aa26.33■■□□□ 1.81
SSSCA1-205ENST00000527920 TMEM14DPA8MWL7 114 aa26.33■■□□□ 1.81
SSSCA1-205ENST00000527920 CCRL2O00421 344 aa26.33■■□□□ 1.81
SSSCA1-205ENST00000527920 HBZP02008 142 aa26.33■■□□□ 1.81
SSSCA1-205ENST00000527920 GAPDHP04406 335 aaKnown RBP26.33■■□□□ 1.81
SSSCA1-205ENST00000527920 CD28P10747 220 aa26.33■■□□□ 1.81
SSSCA1-205ENST00000527920 QRFPP83859 136 aa26.33■■□□□ 1.81
SSSCA1-205ENST00000527920 STEAP3Q658P3 488 aa26.33■■□□□ 1.81
SSSCA1-205ENST00000527920 NDUFA11Q86Y39 141 aa26.33■■□□□ 1.81
SSSCA1-205ENST00000527920 NEDD4LQ96PU5 975 aa26.33■■□□□ 1.81
SSSCA1-205ENST00000527920 CMYA5Q8N3K9 4069 aa26.33■■□□□ 1.81
SSSCA1-205ENST00000527920 UBE2QL1A1L167 161 aa26.32■■□□□ 1.8
SSSCA1-205ENST00000527920 ATP6V1G2O95670 118 aa26.32■■□□□ 1.8
SSSCA1-205ENST00000527920 RCC1P18754 421 aaPredicted RBP26.32■■□□□ 1.8
SSSCA1-205ENST00000527920 IL3RAP26951 378 aa26.32■■□□□ 1.8
SSSCA1-205ENST00000527920 MAP2K4P45985 399 aa26.32■■□□□ 1.8
SSSCA1-205ENST00000527920 ZNF137PP52743 207 aa26.32■■□□□ 1.8
SSSCA1-205ENST00000527920 UNC119Q13432 240 aa26.32■■□□□ 1.8
SSSCA1-205ENST00000527920 OR10K2Q6IF99 312 aa26.32■■□□□ 1.8
SSSCA1-205ENST00000527920 SLC25A48Q6ZT89 311 aaKnown RBP26.32■■□□□ 1.8
SSSCA1-205ENST00000527920 ZNF439Q8NDP4 499 aa26.32■■□□□ 1.8
SSSCA1-205ENST00000527920 ST6GALNAC6Q969X2 333 aa26.32■■□□□ 1.8
SSSCA1-205ENST00000527920 ACOT13Q9NPJ3 140 aa26.32■■□□□ 1.8
SSSCA1-205ENST00000527920 GNG12Q9UBI6 72 aa26.32■■□□□ 1.8
SSSCA1-205ENST00000527920 WIPF1O43516 503 aa26.31■■□□□ 1.8
SSSCA1-205ENST00000527920 EMX1Q04741 257 aaPredicted RBP26.31■■□□□ 1.8
SSSCA1-205ENST00000527920 EBI3Q14213 229 aa26.31■■□□□ 1.8
SSSCA1-205ENST00000527920 ZNF367Q7RTV3 350 aa26.31■■□□□ 1.8
SSSCA1-205ENST00000527920 MRPL30Q8TCC3 161 aaKnown RBP26.31■■□□□ 1.8
SSSCA1-205ENST00000527920 TAF9BQ9HBM6 251 aa26.31■■□□□ 1.8
SSSCA1-205ENST00000527920 KCNIP1Q9NZI2 227 aa26.31■■□□□ 1.8
SSSCA1-205ENST00000527920 IGHV3-43A0A0B4J1X8 118 aa26.3■■□□□ 1.8
SSSCA1-205ENST00000527920 IGHV1-3A0A0C4DH29 117 aa26.3■■□□□ 1.8
SSSCA1-205ENST00000527920 SLC17A2O00624 439 aa26.3■■□□□ 1.8
SSSCA1-205ENST00000527920 FGF16O43320 207 aa26.3■■□□□ 1.8
SSSCA1-205ENST00000527920 OPN1MWP04001 364 aa26.3■■□□□ 1.8
SSSCA1-205ENST00000527920 LPLP06858 475 aa26.3■■□□□ 1.8
SSSCA1-205ENST00000527920 OPN1MW2P0DN77 364 aa26.3■■□□□ 1.8
SSSCA1-205ENST00000527920 OPN1MW3P0DN78 364 aa26.3■■□□□ 1.8
SSSCA1-205ENST00000527920 IGHV3-43DP0DP04 118 aa26.3■■□□□ 1.8
SSSCA1-205ENST00000527920 OR1L1Q8NH94 360 aa26.3■■□□□ 1.8
SSSCA1-205ENST00000527920 TMEM11P17152 192 aa26.29■■□□□ 1.8
SSSCA1-205ENST00000527920 RANBP1P43487 201 aa26.29■■□□□ 1.8
SSSCA1-205ENST00000527920 DEFA6Q01524 100 aa26.29■■□□□ 1.8
SSSCA1-205ENST00000527920 HES1Q14469 280 aa26.29■■□□□ 1.8
SSSCA1-205ENST00000527920 NKAPLQ5M9Q1 402 aa26.29■■□□□ 1.8
SSSCA1-205ENST00000527920 OR2W3Q7Z3T1 314 aa26.29■■□□□ 1.8
SSSCA1-205ENST00000527920 IZUMO1Q8IYV9 350 aa26.29■■□□□ 1.8
SSSCA1-205ENST00000527920 GFI1Q99684 422 aa26.29■■□□□ 1.8
SSSCA1-205ENST00000527920 SULT4A1Q9BR01 284 aa26.29■■□□□ 1.8
SSSCA1-205ENST00000527920 LRRC42Q9Y546 428 aa26.29■■□□□ 1.8
SSSCA1-205ENST00000527920 TXNL1O43396 289 aa26.28■■□□□ 1.8
SSSCA1-205ENST00000527920 MRPS14O60783 128 aaKnown RBP26.28■■□□□ 1.8
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms