RNA–Protein interactions for RNA: ENST00000526044.5

USP48-211, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 3

Gene USP48, Length 549 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-211ENST00000526044 GPR173Q9NS66 373 aa3.7□□□□□ -1.82
USP48-211ENST00000526044 TAS2R4Q9NYW5 299 aa3.7□□□□□ -1.82
USP48-211ENST00000526044 MYEF2Q9P2K5 600 aaKnown RBP3.7□□□□□ -1.82
USP48-211ENST00000526044 RNF150Q9ULK6 438 aa3.7□□□□□ -1.82
USP48-211ENST00000526044 AK6Q9Y3D8 172 aaKnown RBP3.7□□□□□ -1.82
USP48-211ENST00000526044 NBASA2RRP1 2371 aa3.7□□□□□ -1.82
USP48-211ENST00000526044 DSCAMO60469 2012 aa3.7□□□□□ -1.82
USP48-211ENST00000526044 RELNP78509 3460 aa3.69□□□□□ -1.82
USP48-211ENST00000526044 DYSFO75923 2080 aa3.69□□□□□ -1.82
USP48-211ENST00000526044 A0A075B6Q4 140 aa3.69□□□□□ -1.82
USP48-211ENST00000526044 TRAV8-7A0A075B6U6 113 aa3.69□□□□□ -1.82
USP48-211ENST00000526044 IGKV1-9A0A0C4DH69 117 aa3.69□□□□□ -1.82
USP48-211ENST00000526044 SMIM31A0A1B0GVY4 71 aa3.69□□□□□ -1.82
USP48-211ENST00000526044 A0A1W2PPI3 338 aa3.69□□□□□ -1.82
USP48-211ENST00000526044 TMEM210A6NLX4 147 aa3.69□□□□□ -1.82
USP48-211ENST00000526044 F5H5P2 479 aa3.69□□□□□ -1.82
USP48-211ENST00000526044 MLNRO43193 412 aa3.69□□□□□ -1.82
USP48-211ENST00000526044 AKR7A2O43488 359 aa3.69□□□□□ -1.82
USP48-211ENST00000526044 CIDEAO60543 219 aa3.69□□□□□ -1.82
USP48-211ENST00000526044 CDRT1O95170 752 aa3.69□□□□□ -1.82
USP48-211ENST00000526044 CYB5AP00167 134 aa3.69□□□□□ -1.82
USP48-211ENST00000526044 IGHV1-46P01743 117 aa3.69□□□□□ -1.82
USP48-211ENST00000526044 S100A6P06703 90 aa3.69□□□□□ -1.82
USP48-211ENST00000526044 CD55P08174 381 aa3.69□□□□□ -1.82
USP48-211ENST00000526044 SOD3P08294 240 aa3.69□□□□□ -1.82
USP48-211ENST00000526044 CALCBP10092 127 aa3.69□□□□□ -1.82
USP48-211ENST00000526044 RAB3BP20337 219 aa3.69□□□□□ -1.82
USP48-211ENST00000526044 SDC2P34741 201 aa3.69□□□□□ -1.82
USP48-211ENST00000526044 ZNF93P35789 620 aaPredicted RBP3.69□□□□□ -1.82
USP48-211ENST00000526044 RANBP1P43487 201 aa3.69□□□□□ -1.82
USP48-211ENST00000526044 GLIPR1P48060 266 aa3.69□□□□□ -1.82
USP48-211ENST00000526044 SERPINB10P48595 397 aa3.69□□□□□ -1.82
USP48-211ENST00000526044 PPOXP50336 477 aa3.69□□□□□ -1.82
USP48-211ENST00000526044 GPM6AP51674 278 aa3.69□□□□□ -1.82
USP48-211ENST00000526044 VBP1P61758 197 aa3.69□□□□□ -1.82
USP48-211ENST00000526044 NCS1P62166 190 aa3.69□□□□□ -1.82
USP48-211ENST00000526044 CCL8P80075 99 aa3.69□□□□□ -1.82
USP48-211ENST00000526044 TNFAIP6P98066 277 aaPredicted RBP3.69□□□□□ -1.82
USP48-211ENST00000526044 MXD1Q05195 221 aa3.69□□□□□ -1.82
USP48-211ENST00000526044 MAB21L1Q13394 359 aa3.69□□□□□ -1.82
USP48-211ENST00000526044 RBM39Q14498 530 aaKnown RBP3.69□□□□□ -1.82
USP48-211ENST00000526044 KISS1Q15726 138 aa3.69□□□□□ -1.82
USP48-211ENST00000526044 DDI2Q5TDH0 399 aa3.69□□□□□ -1.82
USP48-211ENST00000526044 GLT8D1Q68CQ7 371 aa3.69□□□□□ -1.82
USP48-211ENST00000526044 DHRS7BQ6IAN0 325 aaPredicted RBP3.69□□□□□ -1.82
USP48-211ENST00000526044 SLC35E4Q6ICL7 350 aa3.69□□□□□ -1.82
USP48-211ENST00000526044 LRRTM1Q86UE6 522 aa3.69□□□□□ -1.82
USP48-211ENST00000526044 ANGPTL5Q86XS5 388 aa3.69□□□□□ -1.82
USP48-211ENST00000526044 MKXQ8IYA7 352 aa3.69□□□□□ -1.82
USP48-211ENST00000526044 OR51A2Q8NGJ7 313 aa3.69□□□□□ -1.82
USP48-211ENST00000526044 OR13C9Q8NGT0 318 aa3.69□□□□□ -1.82
USP48-211ENST00000526044 ZNF420Q8TAQ5 688 aaPredicted RBP3.69□□□□□ -1.82
USP48-211ENST00000526044 TRMT10AQ8TBZ6 339 aaKnown RBP3.69□□□□□ -1.82
USP48-211ENST00000526044 NPRL2Q8WTW4 380 aa3.69□□□□□ -1.82
USP48-211ENST00000526044 RAB2BQ8WUD1 216 aa3.69□□□□□ -1.82
USP48-211ENST00000526044 GTF3AQ92664 365 aaKnown RBP3.69□□□□□ -1.82
USP48-211ENST00000526044 CPNE2Q96FN4 548 aaPredicted RBP3.69□□□□□ -1.82
USP48-211ENST00000526044 OR2V2Q96R30 315 aa3.69□□□□□ -1.82
USP48-211ENST00000526044 GPER1Q99527 375 aa3.69□□□□□ -1.82
USP48-211ENST00000526044 ADAT1Q9BUB4 502 aaKnown RBP3.69□□□□□ -1.82
USP48-211ENST00000526044 TRAF4Q9BUZ4 470 aaPredicted RBP3.69□□□□□ -1.82
USP48-211ENST00000526044 NAA50Q9GZZ1 169 aaKnown RBP3.69□□□□□ -1.82
USP48-211ENST00000526044 TPK1Q9H3S4 243 aa3.69□□□□□ -1.82
USP48-211ENST00000526044 KCNK15Q9H427 330 aa3.69□□□□□ -1.82
USP48-211ENST00000526044 RNF167Q9H6Y7 350 aa3.69□□□□□ -1.82
USP48-211ENST00000526044 RSL24D1Q9UHA3 163 aaKnown RBP3.69□□□□□ -1.82
USP48-211ENST00000526044 ING4Q9UNL4 249 aa3.69□□□□□ -1.82
USP48-211ENST00000526044 GAB2Q9UQC2 676 aa3.69□□□□□ -1.82
USP48-211ENST00000526044 V9GY05 133 aa3.69□□□□□ -1.82
USP48-211ENST00000526044 RAI1Q7Z5J4 1906 aaPredicted RBP3.69□□□□□ -1.82
USP48-211ENST00000526044 CHD3Q12873 2000 aaKnown RBP3.68□□□□□ -1.82
USP48-211ENST00000526044 ZNF462Q96JM2 2506 aa3.68□□□□□ -1.82
USP48-211ENST00000526044 IGHV3-64DA0A0J9YX35 117 aa3.68□□□□□ -1.82
USP48-211ENST00000526044 PQLC2LA1A4F0 135 aa3.68□□□□□ -1.82
USP48-211ENST00000526044 LRP5LA4QPB2 252 aa3.68□□□□□ -1.82
USP48-211ENST00000526044 BTBD17A6NE02 478 aa3.68□□□□□ -1.82
USP48-211ENST00000526044 HELTA6NFD8 242 aa3.68□□□□□ -1.82
USP48-211ENST00000526044 H7C417 338 aa3.68□□□□□ -1.82
USP48-211ENST00000526044 ZNF701M0R085 212 aaPredicted RBP3.68□□□□□ -1.82
USP48-211ENST00000526044 CDIPTO14735 213 aa3.68□□□□□ -1.82
USP48-211ENST00000526044 SLC22A1O15245 554 aa3.68□□□□□ -1.82
USP48-211ENST00000526044 FCGR3BO75015 233 aa3.68□□□□□ -1.82
USP48-211ENST00000526044 GABARAPO95166 117 aa3.68□□□□□ -1.82
USP48-211ENST00000526044 AMBPP02760 352 aa3.68□□□□□ -1.82
USP48-211ENST00000526044 CD37P11049 281 aa3.68□□□□□ -1.82
USP48-211ENST00000526044 IRF2P14316 349 aa3.68□□□□□ -1.82
USP48-211ENST00000526044 COL8A2P25067 703 aa3.68□□□□□ -1.82
USP48-211ENST00000526044 TGFBR1P36897 503 aa3.68□□□□□ -1.82
USP48-211ENST00000526044 NUP62P37198 522 aaPredicted RBP3.68□□□□□ -1.82
USP48-211ENST00000526044 CD200P41217 278 aa3.68□□□□□ -1.82
USP48-211ENST00000526044 PTGFRP43088 359 aa3.68□□□□□ -1.82
USP48-211ENST00000526044 HAAOP46952 286 aa3.68□□□□□ -1.82
USP48-211ENST00000526044 RORCP51449 518 aa3.68□□□□□ -1.82
USP48-211ENST00000526044 EFNA4P52798 201 aa3.68□□□□□ -1.82
USP48-211ENST00000526044 GAGE2BQ13066 116 aa3.68□□□□□ -1.82
USP48-211ENST00000526044 UBE2V1Q13404 147 aa3.68□□□□□ -1.82
USP48-211ENST00000526044 GPR176Q14439 515 aa3.68□□□□□ -1.82
USP48-211ENST00000526044 MPPED2Q15777 294 aa3.68□□□□□ -1.82
USP48-211ENST00000526044 GAGE2EQ4V326 116 aa3.68□□□□□ -1.82
USP48-211ENST00000526044 C1orf100Q5SVJ3 147 aa3.68□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 78.6 ms