RNA–Protein interactions for RNA: ENST00000525209.5

CD44-213, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 4

Gene CD44, Length 574 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-213ENST00000525209 ZNF20P17024 532 aa3.51□□□□□ -1.85
CD44-213ENST00000525209 SPRP35270 261 aaPredicted RBP3.51□□□□□ -1.85
CD44-213ENST00000525209 RAB13P51153 203 aa3.51□□□□□ -1.85
CD44-213ENST00000525209 DNAJB13P59910 316 aa3.51□□□□□ -1.85
CD44-213ENST00000525209 TPI1P60174 286 aa3.51□□□□□ -1.85
CD44-213ENST00000525209 CKS1BP61024 79 aa3.51□□□□□ -1.85
CD44-213ENST00000525209 RPS23P62266 143 aaKnown RBP3.51□□□□□ -1.85
CD44-213ENST00000525209 INCA1Q0VD86 236 aa3.51□□□□□ -1.85
CD44-213ENST00000525209 SLC10A2Q12908 348 aaPredicted RBP3.51□□□□□ -1.85
CD44-213ENST00000525209 PMAIP1Q13794 54 aa3.51□□□□□ -1.85
CD44-213ENST00000525209 IAH1Q2TAA2 248 aaPredicted RBP3.51□□□□□ -1.85
CD44-213ENST00000525209 PLPPR5Q32ZL2 321 aa3.51□□□□□ -1.85
CD44-213ENST00000525209 KIAA1644Q3SXP7 199 aa3.51□□□□□ -1.85
CD44-213ENST00000525209 HENMT1Q5T8I9 393 aaKnown RBP3.51□□□□□ -1.85
CD44-213ENST00000525209 SPATA31B1PQ5VZV4 182 aa3.51□□□□□ -1.85
CD44-213ENST00000525209 NANOGP8Q6NSW7 305 aa3.51□□□□□ -1.85
CD44-213ENST00000525209 LPCAT3Q6P1A2 487 aa3.51□□□□□ -1.85
CD44-213ENST00000525209 DCUN1D2Q6PH85 259 aa3.51□□□□□ -1.85
CD44-213ENST00000525209 ZNF620Q6ZNG0 422 aa3.51□□□□□ -1.85
CD44-213ENST00000525209 DNM1P46Q6ZS02 220 aa3.51□□□□□ -1.85
CD44-213ENST00000525209 ZNF550Q7Z398 422 aa3.51□□□□□ -1.85
CD44-213ENST00000525209 SLC22A18ASQ8N1D0 253 aa3.51□□□□□ -1.85
CD44-213ENST00000525209 OSR2Q8N2R0 312 aa3.51□□□□□ -1.85
CD44-213ENST00000525209 RAB42Q8N4Z0 105 aa3.51□□□□□ -1.85
CD44-213ENST00000525209 METTL27Q8N6F8 245 aaPredicted RBP3.51□□□□□ -1.85
CD44-213ENST00000525209 OR4K15Q8NH41 348 aa3.51□□□□□ -1.85
CD44-213ENST00000525209 PRSS3P2Q8NHM4 247 aa3.51□□□□□ -1.85
CD44-213ENST00000525209 LRRC29Q8WV35 223 aa3.51□□□□□ -1.85
CD44-213ENST00000525209 AURKBQ96GD4 344 aaPredicted RBP3.51□□□□□ -1.85
CD44-213ENST00000525209 BMFQ96LC9 184 aa3.51□□□□□ -1.85
CD44-213ENST00000525209 GPER1Q99527 375 aa3.51□□□□□ -1.85
CD44-213ENST00000525209 RSPO3Q9BXY4 272 aaPredicted RBP3.51□□□□□ -1.85
CD44-213ENST00000525209 EBPLQ9BY08 206 aa3.51□□□□□ -1.85
CD44-213ENST00000525209 OR51I2Q9H344 312 aa3.51□□□□□ -1.85
CD44-213ENST00000525209 ZDHHC11Q9H8X9 412 aa3.51□□□□□ -1.85
CD44-213ENST00000525209 NANOGQ9H9S0 305 aa3.51□□□□□ -1.85
CD44-213ENST00000525209 ADARB2Q9NS39 739 aaKnown RBP3.51□□□□□ -1.85
CD44-213ENST00000525209 CISHQ9NSE2 258 aa3.51□□□□□ -1.85
CD44-213ENST00000525209 MRPL27Q9P0M9 148 aaKnown RBP3.51□□□□□ -1.85
CD44-213ENST00000525209 PKIGQ9Y2B9 76 aa3.51□□□□□ -1.85
CD44-213ENST00000525209 YTHDF2Q9Y5A9 579 aaKnown RBP3.51□□□□□ -1.85
CD44-213ENST00000525209 ZNF780BQ9Y6R6 833 aa3.51□□□□□ -1.85
CD44-213ENST00000525209 ANKRD31Q8N7Z5 1873 aa3.5□□□□□ -1.85
CD44-213ENST00000525209 IGHV4-4A0A075B6R2 117 aa3.5□□□□□ -1.85
CD44-213ENST00000525209 OR5H1A6NKK0 313 aa3.5□□□□□ -1.85
CD44-213ENST00000525209 FAM183AA6NL82 134 aa3.5□□□□□ -1.85
CD44-213ENST00000525209 FOXI3A8MTJ6 420 aaPredicted RBP3.5□□□□□ -1.85
CD44-213ENST00000525209 C5orf58C9J3I9 102 aa3.5□□□□□ -1.85
CD44-213ENST00000525209 K7EQS6 105 aa3.5□□□□□ -1.85
CD44-213ENST00000525209 HMGB3O15347 200 aaKnown RBP3.5□□□□□ -1.85
CD44-213ENST00000525209 NDUFS5O43920 106 aa3.5□□□□□ -1.85
CD44-213ENST00000525209 PROP1O75360 226 aa3.5□□□□□ -1.85
CD44-213ENST00000525209 ARL6IP5O75915 188 aa3.5□□□□□ -1.85
CD44-213ENST00000525209 IFNGP01579 166 aa3.5□□□□□ -1.85
CD44-213ENST00000525209 C1QBP02746 253 aa3.5□□□□□ -1.85
CD44-213ENST00000525209 C1QCP02747 245 aa3.5□□□□□ -1.85
CD44-213ENST00000525209 ATP5G1P05496 136 aa3.5□□□□□ -1.85
CD44-213ENST00000525209 CELA2AP08217 269 aa3.5□□□□□ -1.85
CD44-213ENST00000525209 CD1EP15812 388 aa3.5□□□□□ -1.85
CD44-213ENST00000525209 KLK2P20151 261 aa3.5□□□□□ -1.85
CD44-213ENST00000525209 VDAC1P21796 283 aa3.5□□□□□ -1.85
CD44-213ENST00000525209 IGHV1-2P23083 117 aa3.5□□□□□ -1.85
CD44-213ENST00000525209 PRSS3P35030 304 aa3.5□□□□□ -1.85
CD44-213ENST00000525209 BTCP35070 178 aa3.5□□□□□ -1.85
CD44-213ENST00000525209 DRD3P35462 400 aa3.5□□□□□ -1.85
CD44-213ENST00000525209 VDAC2P45880 294 aaPredicted RBP3.5□□□□□ -1.85
CD44-213ENST00000525209 PSMD8P48556 350 aa3.5□□□□□ -1.85
CD44-213ENST00000525209 NDUFA8P51970 172 aa3.5□□□□□ -1.85
CD44-213ENST00000525209 SELENOTP62341 195 aa3.5□□□□□ -1.85
CD44-213ENST00000525209 TBPL1P62380 186 aa3.5□□□□□ -1.85
CD44-213ENST00000525209 RPS21P63220 83 aaKnown RBP3.5□□□□□ -1.85
CD44-213ENST00000525209 SRPXP78539 464 aa3.5□□□□□ -1.85
CD44-213ENST00000525209 CDK5Q00535 292 aa3.5□□□□□ -1.85
CD44-213ENST00000525209 C1DQ13901 141 aaKnown RBP3.5□□□□□ -1.85
CD44-213ENST00000525209 CNPY1Q3B7I2 92 aa3.5□□□□□ -1.85
CD44-213ENST00000525209 C9orf64Q5T6V5 341 aa3.5□□□□□ -1.85
CD44-213ENST00000525209 FBXL22Q6P050 247 aa3.5□□□□□ -1.85
CD44-213ENST00000525209 GDPGP1Q6ZNW5 385 aa3.5□□□□□ -1.85
CD44-213ENST00000525209 OOSP2Q86WS3 158 aa3.5□□□□□ -1.85
CD44-213ENST00000525209 TGIF2LYQ8IUE0 185 aa3.5□□□□□ -1.85
CD44-213ENST00000525209 OR4M1Q8NGD0 313 aa3.5□□□□□ -1.85
CD44-213ENST00000525209 OR9Q1Q8NGQ5 310 aa3.5□□□□□ -1.85
CD44-213ENST00000525209 GHSRQ92847 366 aa3.5□□□□□ -1.85
CD44-213ENST00000525209 TCEAL3Q969E4 200 aa3.5□□□□□ -1.85
CD44-213ENST00000525209 FAM3DQ96BQ1 224 aa3.5□□□□□ -1.85
CD44-213ENST00000525209 GALNT14Q96FL9 552 aa3.5□□□□□ -1.85
CD44-213ENST00000525209 ZNF354BQ96LW1 612 aa3.5□□□□□ -1.85
CD44-213ENST00000525209 VPS25Q9BRG1 176 aa3.5□□□□□ -1.85
CD44-213ENST00000525209 C1orf50Q9BV19 199 aa3.5□□□□□ -1.85
CD44-213ENST00000525209 CCDC32Q9BV29 185 aa3.5□□□□□ -1.85
CD44-213ENST00000525209 ZNF226Q9NYT6 803 aa3.5□□□□□ -1.85
CD44-213ENST00000525209 CLCF1Q9UBD9 225 aa3.5□□□□□ -1.85
CD44-213ENST00000525209 GLS2Q9UI32 602 aa3.5□□□□□ -1.85
CD44-213ENST00000525209 MYRFQ9Y2G1 1151 aa3.5□□□□□ -1.85
CD44-213ENST00000525209 HEY1Q9Y5J3 304 aa3.5□□□□□ -1.85
CD44-213ENST00000525209 COL11A2P13942 1736 aaPredicted RBP3.5□□□□□ -1.85
CD44-213ENST00000525209 ANKRD26Q9UPS8 1709 aa3.5□□□□□ -1.85
CD44-213ENST00000525209 SCN11AQ9UI33 1791 aa3.49□□□□□ -1.85
CD44-213ENST00000525209 FAM172BPA6NC97 362 aa3.49□□□□□ -1.85
CD44-213ENST00000525209 DNAJC9-AS1A6NH13 148 aa3.49□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms