RNA–Protein interactions for RNA: ENST00000524773.5

CAPN1-202, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 2,960 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-202ENST00000524773 CACNG5Q9UF02 275 aa11.26□□□□□ -0.61
CAPN1-202ENST00000524773 TMEM56-RWDD3S4R434 201 aa11.26□□□□□ -0.61
CAPN1-202ENST00000524773 A0A1W2PPQ1 181 aa11.25□□□□□ -0.61
CAPN1-202ENST00000524773 A0A1W2PQM1 296 aa11.25□□□□□ -0.61
CAPN1-202ENST00000524773 C9J4A7 227 aa11.25□□□□□ -0.61
CAPN1-202ENST00000524773 ST8SIA5O15466 376 aa11.25□□□□□ -0.61
CAPN1-202ENST00000524773 SYNGR1O43759 233 aa11.25□□□□□ -0.61
CAPN1-202ENST00000524773 CXCL13O43927 109 aa11.25□□□□□ -0.61
CAPN1-202ENST00000524773 PGLYRP1O75594 196 aaPredicted RBP11.25□□□□□ -0.61
CAPN1-202ENST00000524773 FOXG1P55316 489 aaPredicted RBP11.25□□□□□ -0.61
CAPN1-202ENST00000524773 SPANXN5Q5MJ07 72 aa11.25□□□□□ -0.61
CAPN1-202ENST00000524773 HAPLN4Q86UW8 402 aa11.25□□□□□ -0.61
CAPN1-202ENST00000524773 ABHD3Q8WU67 409 aa11.25□□□□□ -0.61
CAPN1-202ENST00000524773 RNF138Q8WVD3 245 aa11.25□□□□□ -0.61
CAPN1-202ENST00000524773 GNPNAT1Q96EK6 184 aaPredicted RBP11.25□□□□□ -0.61
CAPN1-202ENST00000524773 ZNF845Q96IR2 970 aaPredicted RBP11.25□□□□□ -0.61
CAPN1-202ENST00000524773 PCGF1Q9BSM1 259 aa11.25□□□□□ -0.61
CAPN1-202ENST00000524773 OR1A1Q9P1Q5 309 aa11.25□□□□□ -0.61
CAPN1-202ENST00000524773 ERRFI1Q9UJM3 462 aaPredicted RBP11.25□□□□□ -0.61
CAPN1-202ENST00000524773 hCG_38984A0A1B0GV85 526 aa11.25□□□□□ -0.61
CAPN1-202ENST00000524773 KIAA1324LA8MWY0 1029 aaPredicted RBP11.25□□□□□ -0.61
CAPN1-202ENST00000524773 VDAC1P21796 283 aa11.25□□□□□ -0.61
CAPN1-202ENST00000524773 RAB35Q15286 201 aa11.25□□□□□ -0.61
CAPN1-202ENST00000524773 SSX2Q16385 188 aa11.25□□□□□ -0.61
CAPN1-202ENST00000524773 Q3ZCU0 254 aa11.25□□□□□ -0.61
CAPN1-202ENST00000524773 SGCZQ96LD1 299 aa11.25□□□□□ -0.61
CAPN1-202ENST00000524773 OR14J1Q9UGF5 321 aa11.25□□□□□ -0.61
CAPN1-202ENST00000524773 XKRY2A2RUG3 117 aa11.25□□□□□ -0.61
CAPN1-202ENST00000524773 LILRA1O75019 489 aa11.25□□□□□ -0.61
CAPN1-202ENST00000524773 IFNA5P01569 189 aa11.25□□□□□ -0.61
CAPN1-202ENST00000524773 IGKV1D-33P01593 117 aa11.25□□□□□ -0.61
CAPN1-202ENST00000524773 IGKV1-33P01594 117 aa11.25□□□□□ -0.61
CAPN1-202ENST00000524773 OR4A8P0C604 315 aa11.25□□□□□ -0.61
CAPN1-202ENST00000524773 RFPL3SP0C7P2 107 aa11.25□□□□□ -0.61
CAPN1-202ENST00000524773 UCP3P55916 312 aa11.25□□□□□ -0.61
CAPN1-202ENST00000524773 CCL7P80098 99 aa11.25□□□□□ -0.61
CAPN1-202ENST00000524773 KMT5CQ86Y97 462 aa11.25□□□□□ -0.61
CAPN1-202ENST00000524773 HIST1H2AAQ96QV6 131 aa11.25□□□□□ -0.61
CAPN1-202ENST00000524773 SLC25A22Q9H936 323 aa11.25□□□□□ -0.61
CAPN1-202ENST00000524773 SDF2L1Q9HCN8 221 aa11.25□□□□□ -0.61
CAPN1-202ENST00000524773 TMEM38BQ9NVV0 291 aa11.25□□□□□ -0.61
CAPN1-202ENST00000524773 IGLV3-12A0A075B6K2 115 aa11.24□□□□□ -0.61
CAPN1-202ENST00000524773 IGLV3-32A0A0A0MS00 114 aa11.24□□□□□ -0.61
CAPN1-202ENST00000524773 UBE2L5PA0A1B0GUS4 154 aa11.24□□□□□ -0.61
CAPN1-202ENST00000524773 TRAPPC6AO75865 159 aa11.24□□□□□ -0.61
CAPN1-202ENST00000524773 IL18BPO95998 194 aa11.24□□□□□ -0.61
CAPN1-202ENST00000524773 CYB5R3P00387 301 aaPredicted RBP11.24□□□□□ -0.61
CAPN1-202ENST00000524773 FUT6P51993 359 aa11.24□□□□□ -0.61
CAPN1-202ENST00000524773 GNB2P62879 340 aa11.24□□□□□ -0.61
CAPN1-202ENST00000524773 ZXDAP98168 799 aa11.24□□□□□ -0.61
CAPN1-202ENST00000524773 SPINK9Q5DT21 86 aa11.24□□□□□ -0.61
CAPN1-202ENST00000524773 ZNF66Q6ZN08 573 aa11.24□□□□□ -0.61
CAPN1-202ENST00000524773 SMIM7Q9BQ49 75 aa11.24□□□□□ -0.61
CAPN1-202ENST00000524773 SIRT7Q9NRC8 400 aa11.24□□□□□ -0.61
CAPN1-202ENST00000524773 MTCH1Q9NZJ7 389 aa11.24□□□□□ -0.61
CAPN1-202ENST00000524773 SEMA5BQ9P283 1151 aa11.24□□□□□ -0.61
CAPN1-202ENST00000524773 LRRC3CA6NJW4 275 aa11.24□□□□□ -0.61
CAPN1-202ENST00000524773 DKK1O94907 266 aa11.24□□□□□ -0.61
CAPN1-202ENST00000524773 ZNF124Q15973 351 aa11.24□□□□□ -0.61
CAPN1-202ENST00000524773 TMEM211Q6ICI0 200 aa11.24□□□□□ -0.61
CAPN1-202ENST00000524773 AAED1Q7RTV5 226 aa11.24□□□□□ -0.61
CAPN1-202ENST00000524773 M1APQ8TC57 530 aa11.24□□□□□ -0.61
CAPN1-202ENST00000524773 SCGB1C1Q8TD33 95 aa11.24□□□□□ -0.61
CAPN1-202ENST00000524773 RBMXL1Q96E39 390 aaKnown RBP11.24□□□□□ -0.61
CAPN1-202ENST00000524773 SPIN2AQ99865 258 aa11.24□□□□□ -0.61
CAPN1-202ENST00000524773 SPIN2BQ9BPZ2 258 aa11.24□□□□□ -0.61
CAPN1-202ENST00000524773 RARRES3Q9UL19 164 aa11.24□□□□□ -0.61
CAPN1-202ENST00000524773 FUT9Q9Y231 359 aa11.24□□□□□ -0.61
CAPN1-202ENST00000524773 SPENQ96T58 3664 aaKnown RBP11.24□□□□□ -0.61
CAPN1-202ENST00000524773 IGKV1-39P01597 117 aa11.23□□□□□ -0.61
CAPN1-202ENST00000524773 IGKV1D-39P04432 117 aa11.23□□□□□ -0.61
CAPN1-202ENST00000524773 SERPINE2P07093 398 aa11.23□□□□□ -0.61
CAPN1-202ENST00000524773 LIFP15018 202 aa11.23□□□□□ -0.61
CAPN1-202ENST00000524773 TAS2R60P59551 318 aa11.23□□□□□ -0.61
CAPN1-202ENST00000524773 SRYQ05066 204 aa11.23□□□□□ -0.61
CAPN1-202ENST00000524773 FOXB1Q99853 325 aa11.23□□□□□ -0.61
CAPN1-202ENST00000524773 OR2H1Q9GZK4 316 aa11.23□□□□□ -0.61
CAPN1-202ENST00000524773 AHCTF1Q8WYP5 2266 aa11.23□□□□□ -0.61
CAPN1-202ENST00000524773 GTF3C1Q12789 2109 aa11.23□□□□□ -0.61
CAPN1-202ENST00000524773 CFAP47Q6ZTR5 3102 aa11.23□□□□□ -0.61
CAPN1-202ENST00000524773 FKBP2P26885 142 aaKnown RBP11.23□□□□□ -0.61
CAPN1-202ENST00000524773 FAM3BP58499 235 aaPredicted RBP11.23□□□□□ -0.61
CAPN1-202ENST00000524773 PMP22Q01453 160 aa11.23□□□□□ -0.61
CAPN1-202ENST00000524773 WDR5BQ86VZ2 330 aa11.23□□□□□ -0.61
CAPN1-202ENST00000524773 OR10A7Q8NGE5 316 aa11.23□□□□□ -0.61
CAPN1-202ENST00000524773 SMDT1Q9H4I9 107 aa11.23□□□□□ -0.61
CAPN1-202ENST00000524773 SMG1Q96Q15 3661 aaKnown RBP11.22□□□□□ -0.61
CAPN1-202ENST00000524773 ELOA3CA0A087WX78 387 aaPredicted RBP11.22□□□□□ -0.61
CAPN1-202ENST00000524773 MAP1LC3B2A6NCE7 125 aa11.22□□□□□ -0.61
CAPN1-202ENST00000524773 TP53I11O14683 189 aa11.22□□□□□ -0.61
CAPN1-202ENST00000524773 NGFP01138 241 aa11.22□□□□□ -0.61
CAPN1-202ENST00000524773 UCP1P25874 307 aa11.22□□□□□ -0.61
CAPN1-202ENST00000524773 WIPI1Q5MNZ9 446 aaPredicted RBP11.22□□□□□ -0.61
CAPN1-202ENST00000524773 TMEM42Q69YG0 159 aa11.22□□□□□ -0.61
CAPN1-202ENST00000524773 ASCL4Q6XD76 172 aa11.22□□□□□ -0.61
CAPN1-202ENST00000524773 RABEPKQ7Z6M1 372 aa11.22□□□□□ -0.61
CAPN1-202ENST00000524773 MAP1LC3BQ9GZQ8 125 aa11.22□□□□□ -0.61
CAPN1-202ENST00000524773 PSENENQ9NZ42 101 aa11.22□□□□□ -0.61
CAPN1-202ENST00000524773 ZNF737O75373 536 aa11.22□□□□□ -0.61
CAPN1-202ENST00000524773 IDH3GP51553 393 aaPredicted RBP11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms