RNA–Protein interactions for RNA: ENST00000524523.1

CTR9-202, Transcript of CTR9 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 5

Gene CTR9, Length 902 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTR9-202ENST00000524523 HMGN3Q15651 99 aa6.33□□□□□ -1.4
CTR9-202ENST00000524523 TSC22D1Q15714 1073 aa6.33□□□□□ -1.4
CTR9-202ENST00000524523 ALKBH6Q3KRA9 238 aa6.33□□□□□ -1.4
CTR9-202ENST00000524523 TMEM30BQ3MIR4 351 aa6.33□□□□□ -1.4
CTR9-202ENST00000524523 CLLU1Q5K131 121 aa6.33□□□□□ -1.4
CTR9-202ENST00000524523 C6orf183Q5T699 404 aa6.33□□□□□ -1.4
CTR9-202ENST00000524523 PRSS54Q6PEW0 395 aa6.33□□□□□ -1.4
CTR9-202ENST00000524523 MYO7BQ6PIF6 2116 aa6.33□□□□□ -1.4
CTR9-202ENST00000524523 C17orf107Q6ZR85 190 aa6.33□□□□□ -1.4
CTR9-202ENST00000524523 RTN4RL2Q86UN3 420 aa6.33□□□□□ -1.4
CTR9-202ENST00000524523 H1FOOQ8IZA3 346 aaPredicted RBP6.33□□□□□ -1.4
CTR9-202ENST00000524523 ZNF565Q8N9K5 539 aa6.33□□□□□ -1.4
CTR9-202ENST00000524523 CLEC18CQ8NCF0 446 aa6.33□□□□□ -1.4
CTR9-202ENST00000524523 OR8H1Q8NGG4 311 aa6.33□□□□□ -1.4
CTR9-202ENST00000524523 LRRC20Q8TCA0 184 aa6.33□□□□□ -1.4
CTR9-202ENST00000524523 CASTOR1Q8WTX7 329 aa6.33□□□□□ -1.4
CTR9-202ENST00000524523 GLYATL2Q8WU03 294 aa6.33□□□□□ -1.4
CTR9-202ENST00000524523 FAM222BQ8WU58 562 aa6.33□□□□□ -1.4
CTR9-202ENST00000524523 MRPL24Q96A35 216 aaKnown RBP6.33□□□□□ -1.4
CTR9-202ENST00000524523 C1QTNF6Q9BXI9 259 aa6.33□□□□□ -1.4
CTR9-202ENST00000524523 TMEM222Q9H0R3 208 aa6.33□□□□□ -1.4
CTR9-202ENST00000524523 METTL8Q9H825 291 aaKnown RBP6.33□□□□□ -1.4
CTR9-202ENST00000524523 PLEKHA2Q9HB19 425 aa6.33□□□□□ -1.4
CTR9-202ENST00000524523 ASF1BQ9NVP2 202 aa6.33□□□□□ -1.4
CTR9-202ENST00000524523 UBQLN2Q9UHD9 624 aa6.33□□□□□ -1.4
CTR9-202ENST00000524523 KIF25Q9UIL4 384 aa6.33□□□□□ -1.4
CTR9-202ENST00000524523 APC2O95996 2303 aa6.33□□□□□ -1.4
CTR9-202ENST00000524523 URB1O60287 2271 aaKnown RBP6.33□□□□□ -1.4
CTR9-202ENST00000524523 FXYD6-FXYD2A0A087WZ82 144 aa6.32□□□□□ -1.4
CTR9-202ENST00000524523 TRAV14DV4A0A0A6YYC5 116 aa6.32□□□□□ -1.4
CTR9-202ENST00000524523 C3orf85A0A1B0GTC6 90 aa6.32□□□□□ -1.4
CTR9-202ENST00000524523 A0A1B0GW55 424 aa6.32□□□□□ -1.4
CTR9-202ENST00000524523 LINC00862A6NCI5 91 aa6.32□□□□□ -1.4
CTR9-202ENST00000524523 RNF222A6NCQ9 220 aa6.32□□□□□ -1.4
CTR9-202ENST00000524523 RNF212BA8MTL3 300 aa6.32□□□□□ -1.4
CTR9-202ENST00000524523 EEF1E1-BLOC1S5C9J1V9 151 aa6.32□□□□□ -1.4
CTR9-202ENST00000524523 C22orf46C9J442 243 aa6.32□□□□□ -1.4
CTR9-202ENST00000524523 ITGB1BP1O14713 200 aa6.32□□□□□ -1.4
CTR9-202ENST00000524523 HS3ST1O14792 307 aa6.32□□□□□ -1.4
CTR9-202ENST00000524523 SIX6O95475 246 aa6.32□□□□□ -1.4
CTR9-202ENST00000524523 SCTP09683 121 aa6.32□□□□□ -1.4
CTR9-202ENST00000524523 DUX4L2P0CJ85 424 aa6.32□□□□□ -1.4
CTR9-202ENST00000524523 DUX4L3P0CJ86 424 aa6.32□□□□□ -1.4
CTR9-202ENST00000524523 DUX4L4P0CJ87 422 aa6.32□□□□□ -1.4
CTR9-202ENST00000524523 DUX4L5P0CJ88 424 aa6.32□□□□□ -1.4
CTR9-202ENST00000524523 DUX4L6P0CJ89 424 aa6.32□□□□□ -1.4
CTR9-202ENST00000524523 DUX4L7P0CJ90 424 aa6.32□□□□□ -1.4
CTR9-202ENST00000524523 MMP9P14780 707 aa6.32□□□□□ -1.4
CTR9-202ENST00000524523 MUC1P15941 1255 aaPredicted RBP6.32□□□□□ -1.4
CTR9-202ENST00000524523 TNFRSF1AP19438 455 aa6.32□□□□□ -1.4
CTR9-202ENST00000524523 BMP5P22003 454 aa6.32□□□□□ -1.4
CTR9-202ENST00000524523 AADACP22760 399 aa6.32□□□□□ -1.4
CTR9-202ENST00000524523 DUSP1P28562 367 aa6.32□□□□□ -1.4
CTR9-202ENST00000524523 ASCL1P50553 236 aa6.32□□□□□ -1.4
CTR9-202ENST00000524523 IGFBP7Q16270 282 aa6.32□□□□□ -1.4
CTR9-202ENST00000524523 ANKRD55Q3KP44 614 aa6.32□□□□□ -1.4
CTR9-202ENST00000524523 GPR157Q5UAW9 335 aa6.32□□□□□ -1.4
CTR9-202ENST00000524523 Q6ZPA2 131 aa6.32□□□□□ -1.4
CTR9-202ENST00000524523 RPRMLQ8N4K4 120 aa6.32□□□□□ -1.4
CTR9-202ENST00000524523 FAM71E2Q8N5Q1 922 aa6.32□□□□□ -1.4
CTR9-202ENST00000524523 MAFIPQ8WZ33 124 aa6.32□□□□□ -1.4
CTR9-202ENST00000524523 RDH5Q92781 318 aa6.32□□□□□ -1.4
CTR9-202ENST00000524523 GALMQ96C23 342 aa6.32□□□□□ -1.4
CTR9-202ENST00000524523 MSI2Q96DH6 328 aaKnown RBP6.32□□□□□ -1.4
CTR9-202ENST00000524523 C18orf12Q96KH6 178 aa6.32□□□□□ -1.4
CTR9-202ENST00000524523 SNX22Q96L94 193 aa6.32□□□□□ -1.4
CTR9-202ENST00000524523 AQP10Q96PS8 301 aa6.32□□□□□ -1.4
CTR9-202ENST00000524523 SPIN2AQ99865 258 aa6.32□□□□□ -1.4
CTR9-202ENST00000524523 SPIN2BQ9BPZ2 258 aa6.32□□□□□ -1.4
CTR9-202ENST00000524523 RNF126Q9BV68 326 aa6.32□□□□□ -1.4
CTR9-202ENST00000524523 ARL6Q9H0F7 186 aa6.32□□□□□ -1.4
CTR9-202ENST00000524523 FXYD6Q9H0Q3 95 aa6.32□□□□□ -1.4
CTR9-202ENST00000524523 FAM234AQ9H0X4 552 aa6.32□□□□□ -1.4
CTR9-202ENST00000524523 DNTTIP1Q9H147 329 aa6.32□□□□□ -1.4
CTR9-202ENST00000524523 OR51B6Q9H340 312 aa6.32□□□□□ -1.4
CTR9-202ENST00000524523 LIME1Q9H400 295 aa6.32□□□□□ -1.4
CTR9-202ENST00000524523 ZNF581Q9P0T4 197 aa6.32□□□□□ -1.4
CTR9-202ENST00000524523 DUX4Q9UBX2 424 aa6.32□□□□□ -1.4
CTR9-202ENST00000524523 CACFD1Q9UGQ2 172 aa6.32□□□□□ -1.4
CTR9-202ENST00000524523 TRAPPC2LQ9UL33 140 aa6.32□□□□□ -1.4
CTR9-202ENST00000524523 GTF3C1Q12789 2109 aa6.32□□□□□ -1.4
CTR9-202ENST00000524523 ACACAQ13085 2346 aa6.32□□□□□ -1.4
CTR9-202ENST00000524523 C13orf42A0A1B0GVH6 325 aa6.31□□□□□ -1.4
CTR9-202ENST00000524523 KANTRA0A1W2PQU2 76 aa6.31□□□□□ -1.4
CTR9-202ENST00000524523 H0Y980 276 aa6.31□□□□□ -1.4
CTR9-202ENST00000524523 H0YL77 283 aa6.31□□□□□ -1.4
CTR9-202ENST00000524523 MGST3O14880 152 aa6.31□□□□□ -1.4
CTR9-202ENST00000524523 ARPC5O15511 151 aa6.31□□□□□ -1.4
CTR9-202ENST00000524523 ZNHIT1O43257 154 aa6.31□□□□□ -1.4
CTR9-202ENST00000524523 ATG12O94817 140 aa6.31□□□□□ -1.4
CTR9-202ENST00000524523 VDAC1P21796 283 aa6.31□□□□□ -1.4
CTR9-202ENST00000524523 F2RP25116 425 aa6.31□□□□□ -1.4
CTR9-202ENST00000524523 UCP1P25874 307 aa6.31□□□□□ -1.4
CTR9-202ENST00000524523 CHRNB4P30926 498 aa6.31□□□□□ -1.4
CTR9-202ENST00000524523 PRDX2P32119 198 aa6.31□□□□□ -1.4
CTR9-202ENST00000524523 LUMP51884 338 aaPredicted RBP6.31□□□□□ -1.4
CTR9-202ENST00000524523 SNRPD2P62316 118 aaKnown RBP6.31□□□□□ -1.4
CTR9-202ENST00000524523 UBA52P62987 128 aaKnown RBP6.31□□□□□ -1.4
CTR9-202ENST00000524523 BAMBIQ13145 260 aa6.31□□□□□ -1.4
CTR9-202ENST00000524523 SMCO1Q147U7 214 aa6.31□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 71.6 ms