RNA–Protein interactions for RNA: ENST00000523237.1

CLN8-206, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

TSL 3

Gene CLN8, Length 835 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-206ENST00000523237 TMED9Q9BVK6 235 aa12.92□□□□□ -0.34
CLN8-206ENST00000523237 CST11Q9H112 138 aa12.92□□□□□ -0.34
CLN8-206ENST00000523237 GFOD1Q9NXC2 390 aa12.92□□□□□ -0.34
CLN8-206ENST00000523237 SH2D7A6NKC9 451 aaPredicted RBP12.91□□□□□ -0.34
CLN8-206ENST00000523237 G3V4G9 280 aa12.91□□□□□ -0.34
CLN8-206ENST00000523237 H0YHG0 523 aa12.91□□□□□ -0.34
CLN8-206ENST00000523237 SPINT2O43291 252 aa12.91□□□□□ -0.34
CLN8-206ENST00000523237 FUT3P21217 361 aa12.91□□□□□ -0.34
CLN8-206ENST00000523237 IL3RAP26951 378 aa12.91□□□□□ -0.34
CLN8-206ENST00000523237 INSL4Q14641 139 aa12.91□□□□□ -0.34
CLN8-206ENST00000523237 MED22Q15528 200 aa12.91□□□□□ -0.34
CLN8-206ENST00000523237 TMEM30BQ3MIR4 351 aa12.91□□□□□ -0.34
CLN8-206ENST00000523237 Q3ZCU0 254 aa12.91□□□□□ -0.34
CLN8-206ENST00000523237 GLT8D1Q68CQ7 371 aa12.91□□□□□ -0.34
CLN8-206ENST00000523237 TRAT1Q6PIZ9 186 aa12.91□□□□□ -0.34
CLN8-206ENST00000523237 OR4X2Q8NGF9 303 aa12.91□□□□□ -0.34
CLN8-206ENST00000523237 NRG4Q8WWG1 115 aa12.91□□□□□ -0.34
CLN8-206ENST00000523237 FAM46BQ96A09 425 aa12.91□□□□□ -0.34
CLN8-206ENST00000523237 LSM2Q9Y333 95 aaKnown RBP12.91□□□□□ -0.34
CLN8-206ENST00000523237 TPRKBQ9Y3C4 175 aa12.91□□□□□ -0.34
CLN8-206ENST00000523237 IGHV3-43A0A0B4J1X8 118 aa12.9□□□□□ -0.34
CLN8-206ENST00000523237 IGHV1-3A0A0C4DH29 117 aa12.9□□□□□ -0.34
CLN8-206ENST00000523237 A0A1W2PRX2 142 aa12.9□□□□□ -0.34
CLN8-206ENST00000523237 C12orf77C9JDV5 145 aa12.9□□□□□ -0.34
CLN8-206ENST00000523237 FGF16O43320 207 aa12.9□□□□□ -0.34
CLN8-206ENST00000523237 SC5DO75845 299 aa12.9□□□□□ -0.34
CLN8-206ENST00000523237 IGKV1D-33P01593 117 aa12.9□□□□□ -0.34
CLN8-206ENST00000523237 IGKV1-33P01594 117 aa12.9□□□□□ -0.34
CLN8-206ENST00000523237 UBBP0CG47 229 aa12.9□□□□□ -0.34
CLN8-206ENST00000523237 IGHV3-43DP0DP04 118 aa12.9□□□□□ -0.34
CLN8-206ENST00000523237 VHLP40337 213 aa12.9□□□□□ -0.34
CLN8-206ENST00000523237 RBM48Q5RL73 367 aaKnown RBP12.9□□□□□ -0.34
CLN8-206ENST00000523237 FAM27D1Q5T7N8 215 aa12.9□□□□□ -0.34
CLN8-206ENST00000523237 SAMD5Q5TGI4 173 aa12.9□□□□□ -0.34
CLN8-206ENST00000523237 MOB3BQ86TA1 216 aa12.9□□□□□ -0.34
CLN8-206ENST00000523237 GAPTQ8N292 157 aa12.9□□□□□ -0.34
CLN8-206ENST00000523237 PRR18Q8N4B5 295 aa12.9□□□□□ -0.34
CLN8-206ENST00000523237 C5orf56Q8N8D9 126 aa12.9□□□□□ -0.34
CLN8-206ENST00000523237 PHYHIPQ92561 330 aa12.9□□□□□ -0.34
CLN8-206ENST00000523237 GNG12Q9UBI6 72 aa12.9□□□□□ -0.34
CLN8-206ENST00000523237 TSSC4Q9Y5U2 329 aaPredicted RBP12.9□□□□□ -0.34
CLN8-206ENST00000523237 TCRBV4S1A1TA0A5B7 111 aa12.89□□□□□ -0.35
CLN8-206ENST00000523237 UBE2QL1A1L167 161 aa12.89□□□□□ -0.35
CLN8-206ENST00000523237 PDCD6O75340 191 aa12.89□□□□□ -0.35
CLN8-206ENST00000523237 MPIG6BO95866 241 aa12.89□□□□□ -0.35
CLN8-206ENST00000523237 HBZP02008 142 aa12.89□□□□□ -0.35
CLN8-206ENST00000523237 REG1BP48304 166 aa12.89□□□□□ -0.35
CLN8-206ENST00000523237 GP2P55259 537 aaKnown RBP12.89□□□□□ -0.35
CLN8-206ENST00000523237 SLC35A2P78381 396 aa12.89□□□□□ -0.35
CLN8-206ENST00000523237 HNF4GQ14541 408 aa12.89□□□□□ -0.35
CLN8-206ENST00000523237 IRF3Q14653 427 aa12.89□□□□□ -0.35
CLN8-206ENST00000523237 BEAN1Q3B7T3 259 aa12.89□□□□□ -0.35
CLN8-206ENST00000523237 SIGIRRQ6IA17 410 aa12.89□□□□□ -0.35
CLN8-206ENST00000523237 FAM53AQ6NSI3 398 aaPredicted RBP12.89□□□□□ -0.35
CLN8-206ENST00000523237 CEACAM19Q7Z692 300 aa12.89□□□□□ -0.35
CLN8-206ENST00000523237 LRRTM1Q86UE6 522 aa12.89□□□□□ -0.35
CLN8-206ENST00000523237 SGCDQ92629 289 aa12.89□□□□□ -0.35
CLN8-206ENST00000523237 UFD1Q92890 307 aa12.89□□□□□ -0.35
CLN8-206ENST00000523237 VCX3BQ9H321 246 aa12.89□□□□□ -0.35
CLN8-206ENST00000523237 PF4V1P10720 104 aa12.88□□□□□ -0.35
CLN8-206ENST00000523237 RCC1P18754 421 aaPredicted RBP12.88□□□□□ -0.35
CLN8-206ENST00000523237 SRMP19623 302 aa12.88□□□□□ -0.35
CLN8-206ENST00000523237 MYF6P23409 242 aa12.88□□□□□ -0.35
CLN8-206ENST00000523237 EBI3Q14213 229 aa12.88□□□□□ -0.35
CLN8-206ENST00000523237 HSD17B12Q53GQ0 312 aa12.88□□□□□ -0.35
CLN8-206ENST00000523237 TCTEX1D4Q5JR98 221 aa12.88□□□□□ -0.35
CLN8-206ENST00000523237 C1orf100Q5SVJ3 147 aa12.88□□□□□ -0.35
CLN8-206ENST00000523237 KPRPQ5T749 579 aaPredicted RBP12.88□□□□□ -0.35
CLN8-206ENST00000523237 SLC25A48Q6ZT89 311 aaKnown RBP12.88□□□□□ -0.35
CLN8-206ENST00000523237 ZNF554Q86TJ5 538 aa12.88□□□□□ -0.35
CLN8-206ENST00000523237 IZUMO1Q8IYV9 350 aa12.88□□□□□ -0.35
CLN8-206ENST00000523237 OR1L1Q8NH94 360 aa12.88□□□□□ -0.35
CLN8-206ENST00000523237 RTN4IP1Q8WWV3 396 aaPredicted RBP12.88□□□□□ -0.35
CLN8-206ENST00000523237 ST6GALNAC6Q969X2 333 aa12.88□□□□□ -0.35
CLN8-206ENST00000523237 NEDD4LQ96PU5 975 aa12.88□□□□□ -0.35
CLN8-206ENST00000523237 ANKRD60Q9BZ19 345 aa12.88□□□□□ -0.35
CLN8-206ENST00000523237 MBNL3Q9NUK0 354 aaKnown RBP12.88□□□□□ -0.35
CLN8-206ENST00000523237 KCNIP1Q9NZI2 227 aa12.88□□□□□ -0.35
CLN8-206ENST00000523237 TGP01266 2768 aa12.88□□□□□ -0.35
CLN8-206ENST00000523237 IGHV3-72A0A0B4J1Y9 119 aa12.87□□□□□ -0.35
CLN8-206ENST00000523237 PSMB11A5LHX3 300 aa12.87□□□□□ -0.35
CLN8-206ENST00000523237 TXNL1O43396 289 aa12.87□□□□□ -0.35
CLN8-206ENST00000523237 RGS10O43665 173 aa12.87□□□□□ -0.35
CLN8-206ENST00000523237 UCHL1P09936 223 aa12.87□□□□□ -0.35
CLN8-206ENST00000523237 HSMCR30P0CW71 290 aa12.87□□□□□ -0.35
CLN8-206ENST00000523237 VSIG8P0DPA2 414 aa12.87□□□□□ -0.35
CLN8-206ENST00000523237 KHDC1LQ5JSQ8 128 aa12.87□□□□□ -0.35
CLN8-206ENST00000523237 NKAPLQ5M9Q1 402 aa12.87□□□□□ -0.35
CLN8-206ENST00000523237 LIPKQ5VXJ0 399 aa12.87□□□□□ -0.35
CLN8-206ENST00000523237 STEAP3Q658P3 488 aa12.87□□□□□ -0.35
CLN8-206ENST00000523237 ZNF439Q8NDP4 499 aa12.87□□□□□ -0.35
CLN8-206ENST00000523237 OR10V1Q8NGI7 309 aa12.87□□□□□ -0.35
CLN8-206ENST00000523237 OR2T10Q8NGZ9 312 aa12.87□□□□□ -0.35
CLN8-206ENST00000523237 KCNG3Q8TAE7 436 aa12.87□□□□□ -0.35
CLN8-206ENST00000523237 EAF1Q96JC9 268 aaPredicted RBP12.87□□□□□ -0.35
CLN8-206ENST00000523237 TMEM59Q9BXS4 323 aa12.87□□□□□ -0.35
CLN8-206ENST00000523237 DUSP21Q9H596 190 aa12.87□□□□□ -0.35
CLN8-206ENST00000523237 TAF9BQ9HBM6 251 aa12.87□□□□□ -0.35
CLN8-206ENST00000523237 SLC31A2O15432 143 aa12.86□□□□□ -0.35
CLN8-206ENST00000523237 HTR2CP28335 458 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms