RNA–Protein interactions for RNA: ENST00000522998.1

PCM1-217, Transcript of pericentriolar material 1, humanhuman

TSL 3

Gene PCM1, Length 493 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-217ENST00000522998 SPPL2BQ8TCT7 592 aa0.81□□□□□ -2.28
PCM1-217ENST00000522998 PDCD6IPQ8WUM4 868 aaKnown RBP0.81□□□□□ -2.28
PCM1-217ENST00000522998 PGLYRP3Q96LB9 341 aa0.81□□□□□ -2.28
PCM1-217ENST00000522998 TAPBPLQ9BX59 468 aa0.81□□□□□ -2.28
PCM1-217ENST00000522998 PRRG3Q9BZD7 231 aa0.81□□□□□ -2.28
PCM1-217ENST00000522998 CXCL16Q9H2A7 254 aa0.81□□□□□ -2.28
PCM1-217ENST00000522998 XKR8Q9H6D3 395 aa0.81□□□□□ -2.28
PCM1-217ENST00000522998 HAUS4Q9H6D7 363 aa0.81□□□□□ -2.28
PCM1-217ENST00000522998 LRRC19Q9H756 370 aa0.81□□□□□ -2.28
PCM1-217ENST00000522998 IFT46Q9NQC8 304 aa0.81□□□□□ -2.28
PCM1-217ENST00000522998 TAS2R13Q9NYV9 303 aa0.81□□□□□ -2.28
PCM1-217ENST00000522998 MRM2Q9UI43 246 aaKnown RBP0.81□□□□□ -2.28
PCM1-217ENST00000522998 OR51B4Q9Y5P0 310 aa0.81□□□□□ -2.28
PCM1-217ENST00000522998 ABCB11O95342 1321 aa0.81□□□□□ -2.28
PCM1-217ENST00000522998 USP42Q9H9J4 1324 aaKnown RBP0.81□□□□□ -2.28
PCM1-217ENST00000522998 SCN9AQ15858 1988 aa0.81□□□□□ -2.28
PCM1-217ENST00000522998 RAB3GAP2Q9H2M9 1393 aa0.81□□□□□ -2.28
PCM1-217ENST00000522998 AHNAK2Q8IVF2 5795 aa0.81□□□□□ -2.28
PCM1-217ENST00000522998 COL4A2P08572 1712 aa0.81□□□□□ -2.28
PCM1-217ENST00000522998 SLIT2O94813 1529 aa0.8□□□□□ -2.28
PCM1-217ENST00000522998 IGSF23A1L1A6 192 aa0.8□□□□□ -2.28
PCM1-217ENST00000522998 H3BSA7 217 aa0.8□□□□□ -2.28
PCM1-217ENST00000522998 CRTAPO75718 401 aaPredicted RBP0.8□□□□□ -2.28
PCM1-217ENST00000522998 LDOC1O95751 146 aaPredicted RBP0.8□□□□□ -2.28
PCM1-217ENST00000522998 FADS2O95864 444 aaKnown RBP0.8□□□□□ -2.28
PCM1-217ENST00000522998 APOA1P02647 267 aa0.8□□□□□ -2.28
PCM1-217ENST00000522998 IGKV1-16P04430 117 aa0.8□□□□□ -2.28
PCM1-217ENST00000522998 P0DMU3 169 aa0.8□□□□□ -2.28
PCM1-217ENST00000522998 FAM231AP0DMU4 169 aa0.8□□□□□ -2.28
PCM1-217ENST00000522998 FAM231CP0DMU5 169 aa0.8□□□□□ -2.28
PCM1-217ENST00000522998 IGHV3-30-3P0DP02 117 aa0.8□□□□□ -2.28
PCM1-217ENST00000522998 GABRA4P48169 554 aa0.8□□□□□ -2.28
PCM1-217ENST00000522998 TNNC1P63316 161 aa0.8□□□□□ -2.28
PCM1-217ENST00000522998 TMEM176BQ3YBM2 270 aaPredicted RBP0.8□□□□□ -2.28
PCM1-217ENST00000522998 FBXO48Q5FWF7 155 aa0.8□□□□□ -2.28
PCM1-217ENST00000522998 SDIM1Q6ZPB5 146 aa0.8□□□□□ -2.28
PCM1-217ENST00000522998 COPS6Q7L5N1 327 aa0.8□□□□□ -2.28
PCM1-217ENST00000522998 MTERF4Q7Z6M4 381 aaKnown RBP0.8□□□□□ -2.28
PCM1-217ENST00000522998 DNAAF3Q8N9W5 541 aa0.8□□□□□ -2.28
PCM1-217ENST00000522998 OR4C16Q8NGL9 310 aa0.8□□□□□ -2.28
PCM1-217ENST00000522998 GALMQ96C23 342 aa0.8□□□□□ -2.28
PCM1-217ENST00000522998 DDIT4LQ96D03 193 aa0.8□□□□□ -2.28
PCM1-217ENST00000522998 MRAP2Q96G30 205 aa0.8□□□□□ -2.28
PCM1-217ENST00000522998 DNAJC30Q96LL9 226 aa0.8□□□□□ -2.28
PCM1-217ENST00000522998 CATSPER2Q96P56 530 aa0.8□□□□□ -2.28
PCM1-217ENST00000522998 C1QTNF6Q9BXI9 259 aa0.8□□□□□ -2.28
PCM1-217ENST00000522998 TTTY12Q9BZ98 90 aa0.8□□□□□ -2.28
PCM1-217ENST00000522998 BCL2L14Q9BZR8 327 aa0.8□□□□□ -2.28
PCM1-217ENST00000522998 OR51E2Q9H255 320 aa0.8□□□□□ -2.28
PCM1-217ENST00000522998 FBXL15Q9H469 300 aa0.8□□□□□ -2.28
PCM1-217ENST00000522998 SCML1Q9UN30 329 aa0.8□□□□□ -2.28
PCM1-217ENST00000522998 POFUT2Q9Y2G5 429 aa0.8□□□□□ -2.28
PCM1-217ENST00000522998 HEY1Q9Y5J3 304 aa0.8□□□□□ -2.28
PCM1-217ENST00000522998 CHD2O14647 1828 aaKnown RBP0.8□□□□□ -2.28
PCM1-217ENST00000522998 A8MWP6 167 aa0.79□□□□□ -2.28
PCM1-217ENST00000522998 BOLA2-SMG1P6H3BVE0 249 aa0.79□□□□□ -2.28
PCM1-217ENST00000522998 SGCEO43556 437 aa0.79□□□□□ -2.28
PCM1-217ENST00000522998 UGT2B11O75310 529 aa0.79□□□□□ -2.28
PCM1-217ENST00000522998 ZNF189O75820 626 aaPredicted RBP0.79□□□□□ -2.28
PCM1-217ENST00000522998 PRB1P04280 392 aa0.79□□□□□ -2.28
PCM1-217ENST00000522998 CTSEP14091 401 aa0.79□□□□□ -2.28
PCM1-217ENST00000522998 NQO2P16083 231 aa0.79□□□□□ -2.28
PCM1-217ENST00000522998 UBE2KP61086 200 aa0.79□□□□□ -2.28
PCM1-217ENST00000522998 SKP2Q13309 424 aa0.79□□□□□ -2.28
PCM1-217ENST00000522998 FLOT2Q14254 428 aa0.79□□□□□ -2.28
PCM1-217ENST00000522998 SS18Q15532 418 aa0.79□□□□□ -2.28
PCM1-217ENST00000522998 TMEM249Q2WGJ8 235 aa0.79□□□□□ -2.28
PCM1-217ENST00000522998 ACSBG2Q5FVE4 666 aa0.79□□□□□ -2.28
PCM1-217ENST00000522998 OR10J3Q5JRS4 329 aa0.79□□□□□ -2.28
PCM1-217ENST00000522998 HENMT1Q5T8I9 393 aaKnown RBP0.79□□□□□ -2.28
PCM1-217ENST00000522998 AADACL4Q5VUY2 407 aa0.79□□□□□ -2.28
PCM1-217ENST00000522998 EBLN2Q6P2I7 272 aa0.79□□□□□ -2.28
PCM1-217ENST00000522998 VN1R4Q7Z5H5 301 aa0.79□□□□□ -2.28
PCM1-217ENST00000522998 TRIML2Q8N7C3 387 aa0.79□□□□□ -2.28
PCM1-217ENST00000522998 OR5C1Q8NGR4 320 aa0.79□□□□□ -2.28
PCM1-217ENST00000522998 OR11L1Q8NGX0 322 aa0.79□□□□□ -2.28
PCM1-217ENST00000522998 ANGPTL6Q8NI99 470 aa0.79□□□□□ -2.28
PCM1-217ENST00000522998 SUN5Q8TC36 379 aa0.79□□□□□ -2.28
PCM1-217ENST00000522998 IFT81Q8WYA0 676 aa0.79□□□□□ -2.28
PCM1-217ENST00000522998 C19orf60Q96EN9 201 aa0.79□□□□□ -2.28
PCM1-217ENST00000522998 SIKE1Q9BRV8 207 aa0.79□□□□□ -2.28
PCM1-217ENST00000522998 UPK3BQ9BT76 320 aa0.79□□□□□ -2.28
PCM1-217ENST00000522998 C11orf49Q9H6J7 331 aa0.79□□□□□ -2.28
PCM1-217ENST00000522998 ENPP5Q9UJA9 477 aa0.79□□□□□ -2.28
PCM1-217ENST00000522998 WASHC3Q9Y3C0 194 aa0.79□□□□□ -2.28
PCM1-217ENST00000522998 KIAA0232Q92628 1395 aa0.79□□□□□ -2.28
PCM1-217ENST00000522998 CRB1P82279 1406 aa0.79□□□□□ -2.28
PCM1-217ENST00000522998 PTPRKQ15262 1439 aa0.79□□□□□ -2.28
PCM1-217ENST00000522998 HELZ2Q9BYK8 2649 aaKnown RBP0.79□□□□□ -2.28
PCM1-217ENST00000522998 FREM1Q5H8C1 2179 aa0.79□□□□□ -2.28
PCM1-217ENST00000522998 ADAMTSL1Q8N6G6 1762 aa0.78□□□□□ -2.28
PCM1-217ENST00000522998 NYNRINQ9P2P1 1898 aaKnown RBP0.78□□□□□ -2.28
PCM1-217ENST00000522998 MUC21A0A0G2JKD1 596 aa0.78□□□□□ -2.28
PCM1-217ENST00000522998 LOC100506127A0A0U1RQW1 187 aa0.78□□□□□ -2.28
PCM1-217ENST00000522998 MUC21A0A140T8X8 626 aa0.78□□□□□ -2.28
PCM1-217ENST00000522998 PHYHO14832 338 aa0.78□□□□□ -2.28
PCM1-217ENST00000522998 FBP1P09467 338 aa0.78□□□□□ -2.28
PCM1-217ENST00000522998 SLC35E2BP0CK96 405 aa0.78□□□□□ -2.28
PCM1-217ENST00000522998 ZNF7P17097 686 aaPredicted RBP0.78□□□□□ -2.28
PCM1-217ENST00000522998 ATF1P18846 271 aa0.78□□□□□ -2.28
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms