RNA–Protein interactions for RNA: ENST00000522792.1

CTNNA1-236, Transcript of catenin alpha 1, humanhuman

TSL 2

Gene CTNNA1, Length 2,044 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-236ENST00000522792 ODAMA1E959 279 aa12.86□□□□□ -0.35
CTNNA1-236ENST00000522792 NKX6-3A6NJ46 265 aa12.86□□□□□ -0.35
CTNNA1-236ENST00000522792 HSPA12AO43301 675 aa12.86□□□□□ -0.35
CTNNA1-236ENST00000522792 SIX6O95475 246 aa12.86□□□□□ -0.35
CTNNA1-236ENST00000522792 HBZP02008 142 aa12.86□□□□□ -0.35
CTNNA1-236ENST00000522792 IGKV1-13P0DP09 117 aa12.86□□□□□ -0.35
CTNNA1-236ENST00000522792 P2RX3P56373 397 aa12.86□□□□□ -0.35
CTNNA1-236ENST00000522792 DHODHQ02127 395 aa12.86□□□□□ -0.35
CTNNA1-236ENST00000522792 ABCA11PQ4W5N1 156 aa12.86□□□□□ -0.35
CTNNA1-236ENST00000522792 FAM53AQ6NSI3 398 aaPredicted RBP12.86□□□□□ -0.35
CTNNA1-236ENST00000522792 H1FOOQ8IZA3 346 aaPredicted RBP12.86□□□□□ -0.35
CTNNA1-236ENST00000522792 DNTTIP1Q9H147 329 aa12.86□□□□□ -0.35
CTNNA1-236ENST00000522792 LRBAP50851 2863 aa12.85□□□□□ -0.35
CTNNA1-236ENST00000522792 ZNF462Q96JM2 2506 aa12.85□□□□□ -0.35
CTNNA1-236ENST00000522792 SIGLEC5O15389 551 aa12.85□□□□□ -0.35
CTNNA1-236ENST00000522792 TUSC2O75896 110 aa12.85□□□□□ -0.35
CTNNA1-236ENST00000522792 ANXA3P12429 323 aa12.85□□□□□ -0.35
CTNNA1-236ENST00000522792 PIGPP57054 158 aa12.85□□□□□ -0.35
CTNNA1-236ENST00000522792 SUPT4H1P63272 117 aaKnown RBP12.85□□□□□ -0.35
CTNNA1-236ENST00000522792 ZFP69Q49AA0 526 aa12.85□□□□□ -0.35
CTNNA1-236ENST00000522792 C6orf183Q5T699 404 aa12.85□□□□□ -0.35
CTNNA1-236ENST00000522792 CLEC18BQ6UXF7 455 aa12.85□□□□□ -0.35
CTNNA1-236ENST00000522792 TCTE3Q8IZS6 198 aa12.85□□□□□ -0.35
CTNNA1-236ENST00000522792 ZNF436Q9C0F3 470 aaPredicted RBP12.85□□□□□ -0.35
CTNNA1-236ENST00000522792 RAB1BQ9H0U4 201 aa12.85□□□□□ -0.35
CTNNA1-236ENST00000522792 ABCA4P78363 2273 aa12.85□□□□□ -0.35
CTNNA1-236ENST00000522792 SFT2D2O95562 160 aa12.84□□□□□ -0.35
CTNNA1-236ENST00000522792 IL2RGP31785 369 aa12.84□□□□□ -0.35
CTNNA1-236ENST00000522792 UCP3P55916 312 aa12.84□□□□□ -0.35
CTNNA1-236ENST00000522792 PAX5Q02548 391 aa12.84□□□□□ -0.35
CTNNA1-236ENST00000522792 C11orf88Q6PI97 169 aa12.84□□□□□ -0.35
CTNNA1-236ENST00000522792 LYPD2Q6UXB3 125 aa12.84□□□□□ -0.35
CTNNA1-236ENST00000522792 KCTD9Q7L273 389 aa12.84□□□□□ -0.35
CTNNA1-236ENST00000522792 SLC38A6Q8IZM9 456 aa12.84□□□□□ -0.35
CTNNA1-236ENST00000522792 ZNF565Q8N9K5 539 aa12.84□□□□□ -0.35
CTNNA1-236ENST00000522792 OR52L2PQ8NGH6 319 aa12.84□□□□□ -0.35
CTNNA1-236ENST00000522792 OR5D13Q8NGL4 314 aa12.84□□□□□ -0.35
CTNNA1-236ENST00000522792 RFESDQ8TAC1 157 aa12.84□□□□□ -0.35
CTNNA1-236ENST00000522792 ARL11Q969Q4 196 aa12.84□□□□□ -0.35
CTNNA1-236ENST00000522792 GALMQ96C23 342 aa12.84□□□□□ -0.35
CTNNA1-236ENST00000522792 RSRP1Q9BUV0 290 aa12.84□□□□□ -0.35
CTNNA1-236ENST00000522792 TRAF4Q9BUZ4 470 aaPredicted RBP12.84□□□□□ -0.35
CTNNA1-236ENST00000522792 SLC5A7Q9GZV3 580 aa12.84□□□□□ -0.35
CTNNA1-236ENST00000522792 PARP12Q9H0J9 701 aaKnown RBP12.84□□□□□ -0.35
CTNNA1-236ENST00000522792 CLEC4MQ9H2X3 399 aaPredicted RBP12.84□□□□□ -0.35
CTNNA1-236ENST00000522792 TEX13DA0A0J9YY54 714 aaPredicted RBP12.84□□□□□ -0.35
CTNNA1-236ENST00000522792 HSD17B6O14756 317 aa12.84□□□□□ -0.35
CTNNA1-236ENST00000522792 SLC22A5O76082 557 aa12.84□□□□□ -0.35
CTNNA1-236ENST00000522792 RPS2P15880 293 aaKnown RBP12.84□□□□□ -0.35
CTNNA1-236ENST00000522792 GNMTQ14749 295 aa12.84□□□□□ -0.35
CTNNA1-236ENST00000522792 LTC4SQ16873 150 aa12.84□□□□□ -0.35
CTNNA1-236ENST00000522792 DTX2Q86UW9 622 aa12.84□□□□□ -0.35
CTNNA1-236ENST00000522792 LDLRAD3Q86YD5 345 aa12.84□□□□□ -0.35
CTNNA1-236ENST00000522792 SPICQ8N5J4 248 aa12.84□□□□□ -0.35
CTNNA1-236ENST00000522792 MITD1Q8WV92 249 aa12.84□□□□□ -0.35
CTNNA1-236ENST00000522792 WDR89Q96FK6 387 aaPredicted RBP12.84□□□□□ -0.35
CTNNA1-236ENST00000522792 LURAP1Q96LR2 239 aa12.84□□□□□ -0.35
CTNNA1-236ENST00000522792 PHB2Q99623 299 aa12.84□□□□□ -0.35
CTNNA1-236ENST00000522792 SLC2A9Q9NRM0 540 aa12.84□□□□□ -0.35
CTNNA1-236ENST00000522792 RDH8Q9NYR8 311 aa12.84□□□□□ -0.35
CTNNA1-236ENST00000522792 OR2W1Q9Y3N9 320 aa12.84□□□□□ -0.35
CTNNA1-236ENST00000522792 IGHV3-43A0A0B4J1X8 118 aa12.83□□□□□ -0.36
CTNNA1-236ENST00000522792 NPIPB11E5RHQ5 1161 aa12.83□□□□□ -0.36
CTNNA1-236ENST00000522792 CCSO14618 274 aa12.83□□□□□ -0.36
CTNNA1-236ENST00000522792 ADAM20O43506 726 aa12.83□□□□□ -0.36
CTNNA1-236ENST00000522792 DUS4LO95620 317 aaKnown RBP12.83□□□□□ -0.36
CTNNA1-236ENST00000522792 IGHV3-43DP0DP04 118 aa12.83□□□□□ -0.36
CTNNA1-236ENST00000522792 NDUFB7P17568 137 aa12.83□□□□□ -0.36
CTNNA1-236ENST00000522792 GNRHRP30968 328 aa12.83□□□□□ -0.36
CTNNA1-236ENST00000522792 CDKN1AP38936 164 aa12.83□□□□□ -0.36
CTNNA1-236ENST00000522792 CEACAM6P40199 344 aa12.83□□□□□ -0.36
CTNNA1-236ENST00000522792 SRSF1Q07955 248 aaKnown RBP eCLIP12.83□□□□□ -0.36
CTNNA1-236ENST00000522792 DCAF12L2Q5VW00 463 aa12.83□□□□□ -0.36
CTNNA1-236ENST00000522792 NLRC3Q7RTR2 1065 aa12.83□□□□□ -0.36
CTNNA1-236ENST00000522792 TMEM246Q9BRR3 403 aa12.83□□□□□ -0.36
CTNNA1-236ENST00000522792 FAM234AQ9H0X4 552 aa12.83□□□□□ -0.36
CTNNA1-236ENST00000522792 CCL28Q9NRJ3 127 aa12.83□□□□□ -0.36
CTNNA1-236ENST00000522792 FBXO9Q9UK97 447 aaPredicted RBP12.83□□□□□ -0.36
CTNNA1-236ENST00000522792 CRYM-AS1A6NIL9 109 aa12.83□□□□□ -0.36
CTNNA1-236ENST00000522792 C15orf65H3BRN8 121 aa12.83□□□□□ -0.36
CTNNA1-236ENST00000522792 H2BFSP57053 126 aa12.83□□□□□ -0.36
CTNNA1-236ENST00000522792 ZNF818PQ6ZRF7 136 aa12.83□□□□□ -0.36
CTNNA1-236ENST00000522792 SGPP2Q8IWX5 399 aa12.83□□□□□ -0.36
CTNNA1-236ENST00000522792 RTN4IP1Q8WWV3 396 aaPredicted RBP12.83□□□□□ -0.36
CTNNA1-236ENST00000522792 GPHA2Q96T91 129 aa12.83□□□□□ -0.36
CTNNA1-236ENST00000522792 KIAA2026Q5HYC2 2103 aa12.82□□□□□ -0.36
CTNNA1-236ENST00000522792 HEXAP06865 529 aa12.82□□□□□ -0.36
CTNNA1-236ENST00000522792 ANKRD55Q3KP44 614 aa12.82□□□□□ -0.36
CTNNA1-236ENST00000522792 SP6Q3SY56 376 aa12.82□□□□□ -0.36
CTNNA1-236ENST00000522792 TRAT1Q6PIZ9 186 aa12.82□□□□□ -0.36
CTNNA1-236ENST00000522792 OR10V1Q8NGI7 309 aa12.82□□□□□ -0.36
CTNNA1-236ENST00000522792 C14orf79Q96F83 325 aa12.82□□□□□ -0.36
CTNNA1-236ENST00000522792 DLL4Q9NR61 685 aa12.82□□□□□ -0.36
CTNNA1-236ENST00000522792 SLC25A10Q9UBX3 287 aaPredicted RBP12.82□□□□□ -0.36
CTNNA1-236ENST00000522792 TNFRSF13BO14836 293 aaPredicted RBP12.81□□□□□ -0.36
CTNNA1-236ENST00000522792 SPINT2O43291 252 aa12.81□□□□□ -0.36
CTNNA1-236ENST00000522792 FCN3O75636 299 aa12.81□□□□□ -0.36
CTNNA1-236ENST00000522792 RP2O75695 350 aa12.81□□□□□ -0.36
CTNNA1-236ENST00000522792 IFNA2P01563 188 aa12.81□□□□□ -0.36
CTNNA1-236ENST00000522792 ERP29P30040 261 aaKnown RBP12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms