RNA–Protein interactions for RNA: ENST00000522557.1

HMGB1P1-201, Transcript of high mobility group box 1 pseudogene 1, humanhuman

BASIC

Gene HMGB1P1, Length 636 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P1-201ENST00000522557 KIF13BQ9NQT8 1826 aa2.45□□□□□ -2.02
HMGB1P1-201ENST00000522557 FAM208AQ9UK61 1670 aaKnown RBP2.44□□□□□ -2.02
HMGB1P1-201ENST00000522557 CCDC88AQ3V6T2 1871 aa2.44□□□□□ -2.02
HMGB1P1-201ENST00000522557 IGHV3-43A0A0B4J1X8 118 aa2.44□□□□□ -2.02
HMGB1P1-201ENST00000522557 TMEM213A2RRL7 107 aa2.44□□□□□ -2.02
HMGB1P1-201ENST00000522557 GMNCA6NCL1 334 aa2.44□□□□□ -2.02
HMGB1P1-201ENST00000522557 PGPA6NDG6 321 aa2.44□□□□□ -2.02
HMGB1P1-201ENST00000522557 VGLL3A8MV65 326 aa2.44□□□□□ -2.02
HMGB1P1-201ENST00000522557 C8orf87E5RJ46 101 aa2.44□□□□□ -2.02
HMGB1P1-201ENST00000522557 CRXO43186 299 aaPredicted RBP2.44□□□□□ -2.02
HMGB1P1-201ENST00000522557 CGB3P0DN86 165 aa2.44□□□□□ -2.02
HMGB1P1-201ENST00000522557 CGB7P0DN87 165 aa2.44□□□□□ -2.02
HMGB1P1-201ENST00000522557 ZNF14P17017 642 aaPredicted RBP2.44□□□□□ -2.02
HMGB1P1-201ENST00000522557 RPA3P35244 121 aaPredicted RBP2.44□□□□□ -2.02
HMGB1P1-201ENST00000522557 PMS2P3Q13401 168 aa2.44□□□□□ -2.02
HMGB1P1-201ENST00000522557 TRIP13Q15645 432 aaPredicted RBP2.44□□□□□ -2.02
HMGB1P1-201ENST00000522557 TMEM69Q5SWH9 247 aa2.44□□□□□ -2.02
HMGB1P1-201ENST00000522557 FAM162BQ5T6X4 162 aa2.44□□□□□ -2.02
HMGB1P1-201ENST00000522557 LAMTOR1Q6IAA8 161 aa2.44□□□□□ -2.02
HMGB1P1-201ENST00000522557 FAM183BPQ6ZVS7 135 aa2.44□□□□□ -2.02
HMGB1P1-201ENST00000522557 MARCH3Q86UD3 253 aa2.44□□□□□ -2.02
HMGB1P1-201ENST00000522557 ZNF561Q8N587 486 aa2.44□□□□□ -2.02
HMGB1P1-201ENST00000522557 DEFB123Q8N688 67 aa2.44□□□□□ -2.02
HMGB1P1-201ENST00000522557 YIPF6Q96EC8 236 aa2.44□□□□□ -2.02
HMGB1P1-201ENST00000522557 FAM210AQ96ND0 272 aa2.44□□□□□ -2.02
HMGB1P1-201ENST00000522557 DHCR7Q9UBM7 475 aaKnown RBP2.44□□□□□ -2.02
HMGB1P1-201ENST00000522557 TAC3Q9UHF0 121 aa2.44□□□□□ -2.02
HMGB1P1-201ENST00000522557 RGPD2P0DJD1 1756 aa2.44□□□□□ -2.02
HMGB1P1-201ENST00000522557 A0A1B0GTI1 187 aa2.43□□□□□ -2.02
HMGB1P1-201ENST00000522557 CD300LBA8K4G0 201 aa2.43□□□□□ -2.02
HMGB1P1-201ENST00000522557 MFNGO00587 321 aa2.43□□□□□ -2.02
HMGB1P1-201ENST00000522557 UBDO15205 165 aa2.43□□□□□ -2.02
HMGB1P1-201ENST00000522557 FABP7O15540 132 aa2.43□□□□□ -2.02
HMGB1P1-201ENST00000522557 SYNGR1O43759 233 aa2.43□□□□□ -2.02
HMGB1P1-201ENST00000522557 SYT1P21579 422 aa2.43□□□□□ -2.02
HMGB1P1-201ENST00000522557 PSMB6P28072 239 aa2.43□□□□□ -2.02
HMGB1P1-201ENST00000522557 ELK4P28324 431 aa2.43□□□□□ -2.02
HMGB1P1-201ENST00000522557 IMPA1P29218 277 aa2.43□□□□□ -2.02
HMGB1P1-201ENST00000522557 ACOT2P49753 483 aa2.43□□□□□ -2.02
HMGB1P1-201ENST00000522557 GDI2P50395 445 aaKnown RBP2.43□□□□□ -2.02
HMGB1P1-201ENST00000522557 PRKCDQ05655 676 aa2.43□□□□□ -2.02
HMGB1P1-201ENST00000522557 SYCP1Q15431 976 aa2.43□□□□□ -2.02
HMGB1P1-201ENST00000522557 PRR9Q5T870 116 aa2.43□□□□□ -2.02
HMGB1P1-201ENST00000522557 TMEM136Q6ZRR5 245 aa2.43□□□□□ -2.02
HMGB1P1-201ENST00000522557 LINC00596Q86U02 117 aa2.43□□□□□ -2.02
HMGB1P1-201ENST00000522557 SLC25A45Q8N413 288 aa2.43□□□□□ -2.02
HMGB1P1-201ENST00000522557 OR7G1Q8NGA0 311 aa2.43□□□□□ -2.02
HMGB1P1-201ENST00000522557 PDCD6IPQ8WUM4 868 aaKnown RBP2.43□□□□□ -2.02
HMGB1P1-201ENST00000522557 NELFBQ8WX92 580 aa2.43□□□□□ -2.02
HMGB1P1-201ENST00000522557 RMI2Q96E14 147 aa2.43□□□□□ -2.02
HMGB1P1-201ENST00000522557 PPP1R36Q96LQ0 422 aa2.43□□□□□ -2.02
HMGB1P1-201ENST00000522557 CATSPER2Q96P56 530 aa2.43□□□□□ -2.02
HMGB1P1-201ENST00000522557 PITX2Q99697 317 aa2.43□□□□□ -2.02
HMGB1P1-201ENST00000522557 PRSS27Q9BQR3 290 aa2.43□□□□□ -2.02
HMGB1P1-201ENST00000522557 HMGXB4Q9UGU5 601 aa2.43□□□□□ -2.02
HMGB1P1-201ENST00000522557 SLC22A14Q9Y267 594 aa2.43□□□□□ -2.02
HMGB1P1-201ENST00000522557 URGCP-MRPS24S4R325 110 aa2.43□□□□□ -2.02
HMGB1P1-201ENST00000522557 ABCB11O95342 1321 aa2.42□□□□□ -2.02
HMGB1P1-201ENST00000522557 MYO3BQ8WXR4 1341 aa2.42□□□□□ -2.02
HMGB1P1-201ENST00000522557 MON2Q7Z3U7 1717 aa2.42□□□□□ -2.02
HMGB1P1-201ENST00000522557 PKD1L3Q7Z443 1732 aa2.42□□□□□ -2.02
HMGB1P1-201ENST00000522557 VIRMAQ69YN4 1812 aaKnown RBP2.42□□□□□ -2.02
HMGB1P1-201ENST00000522557 ABCC12Q96J65 1359 aa2.42□□□□□ -2.02
HMGB1P1-201ENST00000522557 ISLRO14498 428 aa2.42□□□□□ -2.02
HMGB1P1-201ENST00000522557 CBR3O75828 277 aa2.42□□□□□ -2.02
HMGB1P1-201ENST00000522557 KCNK2O95069 426 aa2.42□□□□□ -2.02
HMGB1P1-201ENST00000522557 LIMS3P0CW19 117 aa2.42□□□□□ -2.02
HMGB1P1-201ENST00000522557 LIMS4P0CW20 117 aa2.42□□□□□ -2.02
HMGB1P1-201ENST00000522557 CCL5P13501 91 aa2.42□□□□□ -2.02
HMGB1P1-201ENST00000522557 KDELR2P33947 212 aa2.42□□□□□ -2.02
HMGB1P1-201ENST00000522557 UGT2B10P36537 528 aa2.42□□□□□ -2.02
HMGB1P1-201ENST00000522557 PRDX1Q06830 199 aaKnown RBP2.42□□□□□ -2.02
HMGB1P1-201ENST00000522557 ACTBL2Q562R1 376 aa2.42□□□□□ -2.02
HMGB1P1-201ENST00000522557 PDPK2PQ6A1A2 396 aa2.42□□□□□ -2.02
HMGB1P1-201ENST00000522557 ERICH5Q6P6B1 374 aa2.42□□□□□ -2.02
HMGB1P1-201ENST00000522557 FAM131AQ6UXB0 335 aa2.42□□□□□ -2.02
HMGB1P1-201ENST00000522557 COMTD1Q86VU5 262 aa2.42□□□□□ -2.02
HMGB1P1-201ENST00000522557 C22orf15Q8WYQ4 148 aa2.42□□□□□ -2.02
HMGB1P1-201ENST00000522557 YIPF5Q969M3 257 aa2.42□□□□□ -2.02
HMGB1P1-201ENST00000522557 OPTNQ96CV9 577 aa2.42□□□□□ -2.02
HMGB1P1-201ENST00000522557 YPEL4Q96NS1 127 aa2.42□□□□□ -2.02
HMGB1P1-201ENST00000522557 MED10Q9BTT4 135 aa2.42□□□□□ -2.02
HMGB1P1-201ENST00000522557 C1orf50Q9BV19 199 aa2.42□□□□□ -2.02
HMGB1P1-201ENST00000522557 ZNF436Q9C0F3 470 aaPredicted RBP2.42□□□□□ -2.02
HMGB1P1-201ENST00000522557 DIABLOQ9NR28 239 aa2.42□□□□□ -2.02
HMGB1P1-201ENST00000522557 ZNF706Q9Y5V0 76 aaPredicted RBP2.42□□□□□ -2.02
HMGB1P1-201ENST00000522557 KIAA1551Q9HCM1 1747 aa2.42□□□□□ -2.02
HMGB1P1-201ENST00000522557 TOGARAM1Q9Y4F4 1720 aa2.42□□□□□ -2.02
HMGB1P1-201ENST00000522557 FER1L6Q2WGJ9 1857 aa2.41□□□□□ -2.02
HMGB1P1-201ENST00000522557 RTL9Q8NET4 1388 aa2.41□□□□□ -2.02
HMGB1P1-201ENST00000522557 IBTKQ9P2D0 1353 aaPredicted RBP2.41□□□□□ -2.02
HMGB1P1-201ENST00000522557 DICER1Q9UPY3 1922 aaKnown RBP2.41□□□□□ -2.02
HMGB1P1-201ENST00000522557 IGKV1OR2-108A0A075B7D4 117 aa2.41□□□□□ -2.02
HMGB1P1-201ENST00000522557 TRAV8-3A0A0A6YYJ7 113 aa2.41□□□□□ -2.02
HMGB1P1-201ENST00000522557 FAM183AA6NL82 134 aa2.41□□□□□ -2.02
HMGB1P1-201ENST00000522557 IGLL5B9A064 214 aa2.41□□□□□ -2.02
HMGB1P1-201ENST00000522557 J3QLI3 93 aa2.41□□□□□ -2.02
HMGB1P1-201ENST00000522557 COX7A2P2O60397 106 aa2.41□□□□□ -2.02
HMGB1P1-201ENST00000522557 IGHG2P01859 326 aa2.41□□□□□ -2.02
HMGB1P1-201ENST00000522557 IGLV7-43P04211 117 aa2.41□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms