RNA–Protein interactions for RNA: ENST00000521331.5

PRKDC-204, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 2

Gene PRKDC, Length 1,087 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-204ENST00000521331 TAS2R4Q9NYW5 299 aa11.63□□□□□ -0.55
PRKDC-204ENST00000521331 ZNF581Q9P0T4 197 aa11.63□□□□□ -0.55
PRKDC-204ENST00000521331 ING4Q9UNL4 249 aa11.63□□□□□ -0.55
PRKDC-204ENST00000521331 EI24O14681 340 aa11.62□□□□□ -0.55
PRKDC-204ENST00000521331 GEMIN2O14893 280 aaKnown RBP11.62□□□□□ -0.55
PRKDC-204ENST00000521331 ZNF780AO75290 641 aaPredicted RBP11.62□□□□□ -0.55
PRKDC-204ENST00000521331 ATP5HO75947 161 aa11.62□□□□□ -0.55
PRKDC-204ENST00000521331 CDRT1O95170 752 aa11.62□□□□□ -0.55
PRKDC-204ENST00000521331 OR8U8P0C7N1 319 aa11.62□□□□□ -0.55
PRKDC-204ENST00000521331 SOX2P48431 317 aa11.62□□□□□ -0.55
PRKDC-204ENST00000521331 PPP3R1P63098 170 aa11.62□□□□□ -0.55
PRKDC-204ENST00000521331 RAB40BQ12829 278 aa11.62□□□□□ -0.55
PRKDC-204ENST00000521331 ZNF497Q6ZNH5 498 aa11.62□□□□□ -0.55
PRKDC-204ENST00000521331 SLC25A48Q6ZT89 311 aaKnown RBP11.62□□□□□ -0.55
PRKDC-204ENST00000521331 STX19Q8N4C7 294 aa11.62□□□□□ -0.55
PRKDC-204ENST00000521331 OR11H1Q8NG94 326 aa11.62□□□□□ -0.55
PRKDC-204ENST00000521331 GPR148Q8TDV2 347 aa11.62□□□□□ -0.55
PRKDC-204ENST00000521331 NEK7Q8TDX7 302 aa11.62□□□□□ -0.55
PRKDC-204ENST00000521331 CCDC107Q8WV48 283 aa11.62□□□□□ -0.55
PRKDC-204ENST00000521331 TMEM138Q9NPI0 162 aa11.62□□□□□ -0.55
PRKDC-204ENST00000521331 SMAD5-AS1Q9Y6J3 95 aa11.62□□□□□ -0.55
PRKDC-204ENST00000521331 IGHV3-43A0A0B4J1X8 118 aa11.61□□□□□ -0.55
PRKDC-204ENST00000521331 ZNF736B4DX44 427 aaPredicted RBP11.61□□□□□ -0.55
PRKDC-204ENST00000521331 AIPO00170 330 aa11.61□□□□□ -0.55
PRKDC-204ENST00000521331 SPINT2O43291 252 aa11.61□□□□□ -0.55
PRKDC-204ENST00000521331 CIB2O75838 187 aa11.61□□□□□ -0.55
PRKDC-204ENST00000521331 LY86O95711 162 aa11.61□□□□□ -0.55
PRKDC-204ENST00000521331 MT-ND4P03905 459 aa11.61□□□□□ -0.55
PRKDC-204ENST00000521331 IGHV3-43DP0DP04 118 aa11.61□□□□□ -0.55
PRKDC-204ENST00000521331 GABRB1P18505 474 aa11.61□□□□□ -0.55
PRKDC-204ENST00000521331 ZNF93P35789 620 aaPredicted RBP11.61□□□□□ -0.55
PRKDC-204ENST00000521331 ALDH3A2P51648 485 aa11.61□□□□□ -0.55
PRKDC-204ENST00000521331 ZIK1Q3SY52 487 aaPredicted RBP11.61□□□□□ -0.55
PRKDC-204ENST00000521331 ATAD3CQ5T2N8 411 aa11.61□□□□□ -0.55
PRKDC-204ENST00000521331 UBALD1Q8TB05 177 aa11.61□□□□□ -0.55
PRKDC-204ENST00000521331 MYOZ3Q8TDC0 251 aa11.61□□□□□ -0.55
PRKDC-204ENST00000521331 RGP1Q92546 391 aaPredicted RBP11.61□□□□□ -0.55
PRKDC-204ENST00000521331 TMEM106AQ96A25 262 aa11.61□□□□□ -0.55
PRKDC-204ENST00000521331 UBE2E2Q96LR5 201 aa11.61□□□□□ -0.55
PRKDC-204ENST00000521331 SPACA1Q9HBV2 294 aa11.61□□□□□ -0.55
PRKDC-204ENST00000521331 BATF3Q9NR55 127 aa11.61□□□□□ -0.55
PRKDC-204ENST00000521331 GNG12Q9UBI6 72 aa11.61□□□□□ -0.55
PRKDC-204ENST00000521331 AASSQ9UDR5 926 aa11.61□□□□□ -0.55
PRKDC-204ENST00000521331 ZNF107Q9UII5 783 aaPredicted RBP11.61□□□□□ -0.55
PRKDC-204ENST00000521331 GMPPBQ9Y5P6 360 aa11.61□□□□□ -0.55
PRKDC-204ENST00000521331 SLC31A2O15432 143 aa11.6□□□□□ -0.55
PRKDC-204ENST00000521331 GTF2F2P13984 249 aa11.6□□□□□ -0.55
PRKDC-204ENST00000521331 SERPINA2P20848 420 aa11.6□□□□□ -0.55
PRKDC-204ENST00000521331 F2RL1P55085 397 aa11.6□□□□□ -0.55
PRKDC-204ENST00000521331 RUNX1Q01196 453 aa11.6□□□□□ -0.55
PRKDC-204ENST00000521331 CCDC58Q4VC31 144 aa11.6□□□□□ -0.55
PRKDC-204ENST00000521331 FAM27D1Q5T7N8 215 aa11.6□□□□□ -0.55
PRKDC-204ENST00000521331 DDI2Q5TDH0 399 aa11.6□□□□□ -0.55
PRKDC-204ENST00000521331 STEAP3Q658P3 488 aa11.6□□□□□ -0.55
PRKDC-204ENST00000521331 TMEM65Q6PI78 240 aa11.6□□□□□ -0.55
PRKDC-204ENST00000521331 ZNF439Q8NDP4 499 aa11.6□□□□□ -0.55
PRKDC-204ENST00000521331 OR1N2Q8NGR9 330 aa11.6□□□□□ -0.55
PRKDC-204ENST00000521331 MUC7Q8TAX7 377 aa11.6□□□□□ -0.55
PRKDC-204ENST00000521331 AMBNQ9NP70 447 aa11.6□□□□□ -0.55
PRKDC-204ENST00000521331 VSIG4Q9Y279 399 aa11.6□□□□□ -0.55
PRKDC-204ENST00000521331 C12orf77C9JDV5 145 aa11.59□□□□□ -0.55
PRKDC-204ENST00000521331 BDKRB2P30411 391 aa11.59□□□□□ -0.55
PRKDC-204ENST00000521331 VHLP40337 213 aa11.59□□□□□ -0.55
PRKDC-204ENST00000521331 ZNF616Q08AN1 781 aa11.59□□□□□ -0.55
PRKDC-204ENST00000521331 GPR176Q14439 515 aa11.59□□□□□ -0.55
PRKDC-204ENST00000521331 MMDQ15546 238 aa11.59□□□□□ -0.55
PRKDC-204ENST00000521331 CASC10Q5T4H9 136 aa11.59□□□□□ -0.55
PRKDC-204ENST00000521331 C6orf183Q5T699 404 aa11.59□□□□□ -0.55
PRKDC-204ENST00000521331 SYT6Q5T7P8 510 aaPredicted RBP11.59□□□□□ -0.55
PRKDC-204ENST00000521331 FAM53AQ6NSI3 398 aaPredicted RBP11.59□□□□□ -0.55
PRKDC-204ENST00000521331 RPL22L1Q6P5R6 122 aaKnown RBP11.59□□□□□ -0.55
PRKDC-204ENST00000521331 TRAT1Q6PIZ9 186 aa11.59□□□□□ -0.55
PRKDC-204ENST00000521331 ZNF429Q86V71 674 aa11.59□□□□□ -0.55
PRKDC-204ENST00000521331 ZNF491Q8N8L2 437 aa11.59□□□□□ -0.55
PRKDC-204ENST00000521331 OR52I1Q8NGK6 324 aa11.59□□□□□ -0.55
PRKDC-204ENST00000521331 RHOXF1Q8NHV9 184 aa11.59□□□□□ -0.55
PRKDC-204ENST00000521331 PYDC1Q8WXC3 89 aa11.59□□□□□ -0.55
PRKDC-204ENST00000521331 MRPS18AQ9NVS2 196 aaKnown RBP11.59□□□□□ -0.55
PRKDC-204ENST00000521331 TRAPPC2LQ9UL33 140 aa11.59□□□□□ -0.55
PRKDC-204ENST00000521331 RPL36Q9Y3U8 105 aaKnown RBP11.59□□□□□ -0.55
PRKDC-204ENST00000521331 MCRIP1C9JLW8 97 aa11.58□□□□□ -0.56
PRKDC-204ENST00000521331 I3L521 148 aa11.58□□□□□ -0.56
PRKDC-204ENST00000521331 LANCL1O43813 399 aa11.58□□□□□ -0.56
PRKDC-204ENST00000521331 SLC2A2P11168 524 aaPredicted RBP11.58□□□□□ -0.56
PRKDC-204ENST00000521331 MYF6P23409 242 aa11.58□□□□□ -0.56
PRKDC-204ENST00000521331 PPIFP30405 207 aaKnown RBP11.58□□□□□ -0.56
PRKDC-204ENST00000521331 ZNF134P52741 427 aa11.58□□□□□ -0.56
PRKDC-204ENST00000521331 LSAMPQ13449 338 aa11.58□□□□□ -0.56
PRKDC-204ENST00000521331 SLC22A6Q4U2R8 563 aa11.58□□□□□ -0.56
PRKDC-204ENST00000521331 CT45A1Q5HYN5 189 aa11.58□□□□□ -0.56
PRKDC-204ENST00000521331 CT45A3Q8NHU0 189 aa11.58□□□□□ -0.56
PRKDC-204ENST00000521331 GNB4Q9HAV0 340 aa11.58□□□□□ -0.56
PRKDC-204ENST00000521331 ETAA1Q9NY74 926 aa11.58□□□□□ -0.56
PRKDC-204ENST00000521331 RCC2Q9P258 522 aaKnown RBP11.58□□□□□ -0.56
PRKDC-204ENST00000521331 IGLV1-40P01703 118 aa11.57□□□□□ -0.56
PRKDC-204ENST00000521331 HBZP02008 142 aa11.57□□□□□ -0.56
PRKDC-204ENST00000521331 LIMS3P0CW19 117 aa11.57□□□□□ -0.56
PRKDC-204ENST00000521331 LIMS4P0CW20 117 aa11.57□□□□□ -0.56
PRKDC-204ENST00000521331 KIAA0141Q14154 515 aaPredicted RBP11.57□□□□□ -0.56
PRKDC-204ENST00000521331 CBR4Q8N4T8 237 aa11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms