RNA–Protein interactions for RNA: ENST00000519895.5

MCF2-208, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene MCF2, Length 3,346 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-208ENST00000519895 IGHV1-69DA0A0B4J2H0 117 aa2.31□□□□□ -2.04
MCF2-208ENST00000519895 SMIM31A0A1B0GVY4 71 aa2.31□□□□□ -2.04
MCF2-208ENST00000519895 A0A1W2PR80 420 aa2.31□□□□□ -2.04
MCF2-208ENST00000519895 E9PI62 339 aa2.31□□□□□ -2.04
MCF2-208ENST00000519895 H3BUA1 57 aa2.31□□□□□ -2.04
MCF2-208ENST00000519895 M0QZ24 198 aa2.31□□□□□ -2.04
MCF2-208ENST00000519895 CTDSP2O14595 271 aa2.31□□□□□ -2.04
MCF2-208ENST00000519895 TSPAN4O14817 238 aa2.31□□□□□ -2.04
MCF2-208ENST00000519895 NOL3O60936 208 aaKnown RBP2.31□□□□□ -2.04
MCF2-208ENST00000519895 GPANK1O95872 356 aa2.31□□□□□ -2.04
MCF2-208ENST00000519895 IGHV1-69P01742 117 aa2.31□□□□□ -2.04
MCF2-208ENST00000519895 GRPP07492 148 aa2.31□□□□□ -2.04
MCF2-208ENST00000519895 OCM2P0CE71 109 aa2.31□□□□□ -2.04
MCF2-208ENST00000519895 CHATP28329 748 aa2.31□□□□□ -2.04
MCF2-208ENST00000519895 KIR2DS2P43631 304 aa2.31□□□□□ -2.04
MCF2-208ENST00000519895 OR3A1P47881 315 aa2.31□□□□□ -2.04
MCF2-208ENST00000519895 ERFP50548 548 aa2.31□□□□□ -2.04
MCF2-208ENST00000519895 PRRX1P54821 245 aa2.31□□□□□ -2.04
MCF2-208ENST00000519895 MTCP1P56278 107 aa2.31□□□□□ -2.04
MCF2-208ENST00000519895 RAB11BQ15907 218 aa2.31□□□□□ -2.04
MCF2-208ENST00000519895 ZIK1Q3SY52 487 aaPredicted RBP2.31□□□□□ -2.04
MCF2-208ENST00000519895 HAGHLQ6PII5 290 aaPredicted RBP2.31□□□□□ -2.04
MCF2-208ENST00000519895 CD177Q8N6Q3 437 aa2.31□□□□□ -2.04
MCF2-208ENST00000519895 OR5T2Q8NGG2 359 aa2.31□□□□□ -2.04
MCF2-208ENST00000519895 OR4A4PQ8NGN8 299 aa2.31□□□□□ -2.04
MCF2-208ENST00000519895 WIPF2Q8TF74 440 aaPredicted RBP2.31□□□□□ -2.04
MCF2-208ENST00000519895 RAB2BQ8WUD1 216 aa2.31□□□□□ -2.04
MCF2-208ENST00000519895 UBE2FQ969M7 185 aa2.31□□□□□ -2.04
MCF2-208ENST00000519895 FGGYQ96C11 551 aa2.31□□□□□ -2.04
MCF2-208ENST00000519895 ADTRPQ96IZ2 230 aa2.31□□□□□ -2.04
MCF2-208ENST00000519895 KCTD7Q96MP8 289 aa2.31□□□□□ -2.04
MCF2-208ENST00000519895 AIFM2Q9BRQ8 373 aa2.31□□□□□ -2.04
MCF2-208ENST00000519895 TINAGL1Q9GZM7 467 aaPredicted RBP2.31□□□□□ -2.04
MCF2-208ENST00000519895 ISG20L2Q9H9L3 353 aaKnown RBP2.31□□□□□ -2.04
MCF2-208ENST00000519895 UBAP1Q9NZ09 502 aa2.31□□□□□ -2.04
MCF2-208ENST00000519895 PITPNC1Q9UKF7 332 aa2.31□□□□□ -2.04
MCF2-208ENST00000519895 SPATA2Q9UM82 520 aa2.31□□□□□ -2.04
MCF2-208ENST00000519895 TRGV10A0A0A0MS01 117 aa2.31□□□□□ -2.04
MCF2-208ENST00000519895 KBTBD11-OT1A0A1B0GTJ5 212 aa2.31□□□□□ -2.04
MCF2-208ENST00000519895 METTL21EPA6NDL7 271 aa2.31□□□□□ -2.04
MCF2-208ENST00000519895 RNASEK-C17orf49H0YIS7 233 aa2.31□□□□□ -2.04
MCF2-208ENST00000519895 H0YL77 283 aa2.31□□□□□ -2.04
MCF2-208ENST00000519895 TIMM23O14925 209 aa2.31□□□□□ -2.04
MCF2-208ENST00000519895 GSTZ1O43708 216 aaPredicted RBP2.31□□□□□ -2.04
MCF2-208ENST00000519895 SLC25A17O43808 307 aa2.31□□□□□ -2.04
MCF2-208ENST00000519895 IGLV1-47P01700 117 aa2.31□□□□□ -2.04
MCF2-208ENST00000519895 ZNF728P0DKX0 622 aa2.31□□□□□ -2.04
MCF2-208ENST00000519895 IGHV1-8P0DP01 117 aa2.31□□□□□ -2.04
MCF2-208ENST00000519895 PRB4P10163 310 aaPredicted RBP2.31□□□□□ -2.04
MCF2-208ENST00000519895 TMEM11P17152 192 aa2.31□□□□□ -2.04
MCF2-208ENST00000519895 HTR2CP28335 458 aa2.31□□□□□ -2.04
MCF2-208ENST00000519895 CD1BP29016 333 aa2.31□□□□□ -2.04
MCF2-208ENST00000519895 C21orf33P30042 268 aaPredicted RBP2.31□□□□□ -2.04
MCF2-208ENST00000519895 KIR2DS4P43632 304 aa2.31□□□□□ -2.04
MCF2-208ENST00000519895 RPL5P46777 297 aaKnown RBP2.31□□□□□ -2.04
MCF2-208ENST00000519895 GP2P55259 537 aaKnown RBP2.31□□□□□ -2.04
MCF2-208ENST00000519895 GMFBP60983 142 aa2.31□□□□□ -2.04
MCF2-208ENST00000519895 PPP1R8Q12972 351 aaKnown RBP2.31□□□□□ -2.04
MCF2-208ENST00000519895 KIR2DS1Q14954 304 aa2.31□□□□□ -2.04
MCF2-208ENST00000519895 ARMCX4Q5H9R4 360 aa2.31□□□□□ -2.04
MCF2-208ENST00000519895 DDI2Q5TDH0 399 aa2.31□□□□□ -2.04
MCF2-208ENST00000519895 DCAF12L2Q5VW00 463 aa2.31□□□□□ -2.04
MCF2-208ENST00000519895 C17orf107Q6ZR85 190 aa2.31□□□□□ -2.04
MCF2-208ENST00000519895 NAA40Q86UY6 237 aa2.31□□□□□ -2.04
MCF2-208ENST00000519895 IQCF2Q8IXL9 164 aa2.31□□□□□ -2.04
MCF2-208ENST00000519895 MFSD4AQ8N468 514 aa2.31□□□□□ -2.04
MCF2-208ENST00000519895 C11orf42Q8N5U0 333 aa2.31□□□□□ -2.04
MCF2-208ENST00000519895 TMEM116Q8NCL8 245 aa2.31□□□□□ -2.04
MCF2-208ENST00000519895 ZNF439Q8NDP4 499 aa2.31□□□□□ -2.04
MCF2-208ENST00000519895 BPIFB6Q8NFQ5 453 aa2.31□□□□□ -2.04
MCF2-208ENST00000519895 TSPAN14Q8NG11 270 aa2.31□□□□□ -2.04
MCF2-208ENST00000519895 DYRK2Q92630 601 aa2.31□□□□□ -2.04
MCF2-208ENST00000519895 TMEM106AQ96A25 262 aa2.31□□□□□ -2.04
MCF2-208ENST00000519895 BARHL1Q9BZE3 327 aa2.31□□□□□ -2.04
MCF2-208ENST00000519895 IDI2-AS1Q9NZ38 188 aa2.31□□□□□ -2.04
MCF2-208ENST00000519895 CTSZQ9UBR2 303 aa2.31□□□□□ -2.04
MCF2-208ENST00000519895 DSCAML1Q8TD84 2053 aa2.31□□□□□ -2.04
MCF2-208ENST00000519895 IGKV1-12A0A0C4DH73 117 aa2.3□□□□□ -2.04
MCF2-208ENST00000519895 IFITM5A6NNB3 132 aa2.3□□□□□ -2.04
MCF2-208ENST00000519895 INS-IGF2F8WCM5 200 aa2.3□□□□□ -2.04
MCF2-208ENST00000519895 C15orf65H3BRN8 121 aa2.3□□□□□ -2.04
MCF2-208ENST00000519895 DVL1O14640 695 aa2.3□□□□□ -2.04
MCF2-208ENST00000519895 RBFOX2O43251 390 aaKnown RBP eCLIP2.3□□□□□ -2.04
MCF2-208ENST00000519895 CDC14BO60729 498 aa2.3□□□□□ -2.04
MCF2-208ENST00000519895 NXPH2O95156 264 aa2.3□□□□□ -2.04
MCF2-208ENST00000519895 LALBAP00709 142 aa2.3□□□□□ -2.04
MCF2-208ENST00000519895 IGKV1D-12P01611 117 aa2.3□□□□□ -2.04
MCF2-208ENST00000519895 MRPL3P09001 348 aaKnown RBP2.3□□□□□ -2.04
MCF2-208ENST00000519895 GNAO1P09471 354 aa2.3□□□□□ -2.04
MCF2-208ENST00000519895 HKR1P10072 659 aa2.3□□□□□ -2.04
MCF2-208ENST00000519895 MC5RP33032 325 aa2.3□□□□□ -2.04
MCF2-208ENST00000519895 HAAOP46952 286 aa2.3□□□□□ -2.04
MCF2-208ENST00000519895 CAMLGP49069 296 aa2.3□□□□□ -2.04
MCF2-208ENST00000519895 GPM6AP51674 278 aa2.3□□□□□ -2.04
MCF2-208ENST00000519895 LUMP51884 338 aaPredicted RBP2.3□□□□□ -2.04
MCF2-208ENST00000519895 PTTG1IPP53801 180 aa2.3□□□□□ -2.04
MCF2-208ENST00000519895 MOGAT2Q3SYC2 334 aa2.3□□□□□ -2.04
MCF2-208ENST00000519895 FAM120AOSQ5T036 256 aa2.3□□□□□ -2.04
MCF2-208ENST00000519895 METTL11BQ5VVY1 283 aa2.3□□□□□ -2.04
MCF2-208ENST00000519895 DHRS7BQ6IAN0 325 aaPredicted RBP2.3□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms