RNA–Protein interactions for RNA: ENST00000519479.1

PCDHGB4-201, Transcript of protocadherin gamma subfamily B, 4, humanhuman

TSL 1 (best) BASIC

Gene PCDHGB4, Length 4,578 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB4-201ENST00000519479 WSB1Q9Y6I7 421 aa9.72□□□□□ -0.85
PCDHGB4-201ENST00000519479 MT-ND4LP03901 98 aa9.71□□□□□ -0.85
PCDHGB4-201ENST00000519479 CRYBA1P05813 215 aa9.71□□□□□ -0.85
PCDHGB4-201ENST00000519479 HKR1P10072 659 aa9.71□□□□□ -0.85
PCDHGB4-201ENST00000519479 CCL1P22362 96 aa9.71□□□□□ -0.85
PCDHGB4-201ENST00000519479 PMELP40967 661 aa9.71□□□□□ -0.85
PCDHGB4-201ENST00000519479 ZNF154Q13106 437 aa9.71□□□□□ -0.85
PCDHGB4-201ENST00000519479 ATP1A1-AS1Q5TC04 95 aa9.71□□□□□ -0.85
PCDHGB4-201ENST00000519479 PARP11Q9NR21 331 aa9.71□□□□□ -0.85
PCDHGB4-201ENST00000519479 DECR2Q9NUI1 292 aa9.71□□□□□ -0.85
PCDHGB4-201ENST00000519479 A0A0A6YYD4 124 aa9.71□□□□□ -0.86
PCDHGB4-201ENST00000519479 SPP1P10451 314 aa9.71□□□□□ -0.86
PCDHGB4-201ENST00000519479 PAX6P26367 422 aa9.71□□□□□ -0.86
PCDHGB4-201ENST00000519479 PLGLAQ15195 96 aa9.71□□□□□ -0.86
PCDHGB4-201ENST00000519479 TIPARPQ7Z3E1 657 aaKnown RBP9.71□□□□□ -0.86
PCDHGB4-201ENST00000519479 POC1AQ8NBT0 407 aa9.71□□□□□ -0.86
PCDHGB4-201ENST00000519479 LRRC29Q8WV35 223 aa9.71□□□□□ -0.86
PCDHGB4-201ENST00000519479 RPUSD4Q96CM3 377 aaKnown RBP9.71□□□□□ -0.86
PCDHGB4-201ENST00000519479 GMPPAQ96IJ6 420 aaPredicted RBP9.71□□□□□ -0.86
PCDHGB4-201ENST00000519479 TXN2Q99757 166 aa9.71□□□□□ -0.86
PCDHGB4-201ENST00000519479 VPS25Q9BRG1 176 aa9.71□□□□□ -0.86
PCDHGB4-201ENST00000519479 RTBDNQ9BSG5 229 aaPredicted RBP9.71□□□□□ -0.86
PCDHGB4-201ENST00000519479 C2orf16Q68DN1 1984 aa9.71□□□□□ -0.86
PCDHGB4-201ENST00000519479 PRUNE2Q8WUY3 3088 aa9.71□□□□□ -0.86
PCDHGB4-201ENST00000519479 hCG_38984A0A1B0GV85 526 aa9.71□□□□□ -0.86
PCDHGB4-201ENST00000519479 LRRC30A6NM36 301 aa9.71□□□□□ -0.86
PCDHGB4-201ENST00000519479 SYNGR2O43760 224 aa9.71□□□□□ -0.86
PCDHGB4-201ENST00000519479 SEC11BP0C7V7 166 aa9.71□□□□□ -0.86
PCDHGB4-201ENST00000519479 OR4A4PQ8NGN8 299 aa9.71□□□□□ -0.86
PCDHGB4-201ENST00000519479 MRGPRFQ96AM1 343 aa9.71□□□□□ -0.86
PCDHGB4-201ENST00000519479 MSI2Q96DH6 328 aaKnown RBP9.71□□□□□ -0.86
PCDHGB4-201ENST00000519479 TAAR6Q96RI8 345 aa9.71□□□□□ -0.86
PCDHGB4-201ENST00000519479 S1PR3Q99500 378 aa9.71□□□□□ -0.86
PCDHGB4-201ENST00000519479 HAND1O96004 215 aa9.7□□□□□ -0.86
PCDHGB4-201ENST00000519479 MUC1P15941 1255 aaPredicted RBP9.7□□□□□ -0.86
PCDHGB4-201ENST00000519479 IL24Q13007 206 aa9.7□□□□□ -0.86
PCDHGB4-201ENST00000519479 RNF144BQ7Z419 303 aa9.7□□□□□ -0.86
PCDHGB4-201ENST00000519479 FAM24BQ8N5W8 94 aa9.7□□□□□ -0.86
PCDHGB4-201ENST00000519479 WNT2BQ93097 391 aa9.7□□□□□ -0.86
PCDHGB4-201ENST00000519479 RSRP1Q9BUV0 290 aa9.7□□□□□ -0.86
PCDHGB4-201ENST00000519479 ZNF703Q9H7S9 590 aaPredicted RBP9.7□□□□□ -0.86
PCDHGB4-201ENST00000519479 NKX6-3A6NJ46 265 aa9.7□□□□□ -0.86
PCDHGB4-201ENST00000519479 M0R1X1 148 aa9.7□□□□□ -0.86
PCDHGB4-201ENST00000519479 GAPDHP04406 335 aaKnown RBP9.7□□□□□ -0.86
PCDHGB4-201ENST00000519479 COX5AP20674 150 aa9.7□□□□□ -0.86
PCDHGB4-201ENST00000519479 CTSSP25774 331 aa9.7□□□□□ -0.86
PCDHGB4-201ENST00000519479 SULT1A2P50226 295 aa9.7□□□□□ -0.86
PCDHGB4-201ENST00000519479 TMPRSS3P57727 454 aa9.7□□□□□ -0.86
PCDHGB4-201ENST00000519479 COTL1Q14019 142 aa9.7□□□□□ -0.86
PCDHGB4-201ENST00000519479 WFDC8Q8IUA0 241 aa9.7□□□□□ -0.86
PCDHGB4-201ENST00000519479 CA5BP1Q8WTZ4 195 aa9.7□□□□□ -0.86
PCDHGB4-201ENST00000519479 TMEM222Q9H0R3 208 aa9.7□□□□□ -0.86
PCDHGB4-201ENST00000519479 CXXC4Q9H2H0 198 aa9.7□□□□□ -0.86
PCDHGB4-201ENST00000519479 CTNNBIP1Q9NSA3 81 aaPredicted RBP9.7□□□□□ -0.86
PCDHGB4-201ENST00000519479 MMP24Q9Y5R2 645 aa9.7□□□□□ -0.86
PCDHGB4-201ENST00000519479 GATCO43716 136 aaKnown RBP9.7□□□□□ -0.86
PCDHGB4-201ENST00000519479 C1QL1O75973 258 aa9.7□□□□□ -0.86
PCDHGB4-201ENST00000519479 PSG2P11465 335 aa9.7□□□□□ -0.86
PCDHGB4-201ENST00000519479 HTD2P86397 168 aa9.7□□□□□ -0.86
PCDHGB4-201ENST00000519479 ZNF429Q86V71 674 aa9.7□□□□□ -0.86
PCDHGB4-201ENST00000519479 CALHM1Q8IU99 346 aa9.7□□□□□ -0.86
PCDHGB4-201ENST00000519479 PUSL1Q8N0Z8 303 aaKnown RBP9.7□□□□□ -0.86
PCDHGB4-201ENST00000519479 PINX1Q96BK5 328 aaKnown RBP9.7□□□□□ -0.86
PCDHGB4-201ENST00000519479 NRIP2Q9BQI9 281 aa9.7□□□□□ -0.86
PCDHGB4-201ENST00000519479 ACTR3CQ9C0K3 210 aaPredicted RBP9.7□□□□□ -0.86
PCDHGB4-201ENST00000519479 ALPK3Q96L96 1907 aa9.7□□□□□ -0.86
PCDHGB4-201ENST00000519479 PPP5D1E7EU14 171 aa9.7□□□□□ -0.86
PCDHGB4-201ENST00000519479 IGHV3-13P01766 116 aa9.7□□□□□ -0.86
PCDHGB4-201ENST00000519479 IGHV3-7P01780 117 aa9.7□□□□□ -0.86
PCDHGB4-201ENST00000519479 FABP4P15090 132 aa9.7□□□□□ -0.86
PCDHGB4-201ENST00000519479 ZNF708P17019 499 aa9.7□□□□□ -0.86
PCDHGB4-201ENST00000519479 SLC38A11Q08AI6 406 aa9.7□□□□□ -0.86
PCDHGB4-201ENST00000519479 ZIC4Q8N9L1 334 aa9.7□□□□□ -0.86
PCDHGB4-201ENST00000519479 OR4F5Q8NH21 305 aa9.7□□□□□ -0.86
PCDHGB4-201ENST00000519479 OR4F4Q96R69 305 aa9.7□□□□□ -0.86
PCDHGB4-201ENST00000519479 SMIM7Q9BQ49 75 aa9.7□□□□□ -0.86
PCDHGB4-201ENST00000519479 MSL2Q9HCI7 577 aa9.7□□□□□ -0.86
PCDHGB4-201ENST00000519479 DEPPQ9NTK1 212 aa9.7□□□□□ -0.86
PCDHGB4-201ENST00000519479 C5orf63A6NC05 138 aa9.69□□□□□ -0.86
PCDHGB4-201ENST00000519479 FAM74A7A6NL05 159 aa9.69□□□□□ -0.86
PCDHGB4-201ENST00000519479 A8MXE2 369 aa9.69□□□□□ -0.86
PCDHGB4-201ENST00000519479 AP4M1O00189 453 aa9.69□□□□□ -0.86
PCDHGB4-201ENST00000519479 NKX2-8O15522 239 aa9.69□□□□□ -0.86
PCDHGB4-201ENST00000519479 FGF7P21781 194 aa9.69□□□□□ -0.86
PCDHGB4-201ENST00000519479 FAM74A3Q4VXF1 159 aa9.69□□□□□ -0.86
PCDHGB4-201ENST00000519479 NCMAPQ5T1S8 102 aa9.69□□□□□ -0.86
PCDHGB4-201ENST00000519479 C22orf15Q8WYQ4 148 aa9.69□□□□□ -0.86
PCDHGB4-201ENST00000519479 ATP23Q9Y6H3 246 aa9.69□□□□□ -0.86
PCDHGB4-201ENST00000519479 FAM90A10PA6NDY2 464 aa9.69□□□□□ -0.86
PCDHGB4-201ENST00000519479 FAM90A18PA6NE21 464 aa9.69□□□□□ -0.86
PCDHGB4-201ENST00000519479 FAM90A16PA6NEW6 464 aa9.69□□□□□ -0.86
PCDHGB4-201ENST00000519479 FAM90A20PA6NIJ5 464 aa9.69□□□□□ -0.86
PCDHGB4-201ENST00000519479 FAM90A8PA6NJQ4 464 aa9.69□□□□□ -0.86
PCDHGB4-201ENST00000519479 FAM90A7PA6NKC0 464 aa9.69□□□□□ -0.86
PCDHGB4-201ENST00000519479 FAM90A22PA8MWA6 464 aa9.69□□□□□ -0.86
PCDHGB4-201ENST00000519479 FAM90A12PA8MX19 464 aa9.69□□□□□ -0.86
PCDHGB4-201ENST00000519479 FAM90A5PA8MXJ8 464 aa9.69□□□□□ -0.86
PCDHGB4-201ENST00000519479 FAM90A23PA8MXZ1 464 aa9.69□□□□□ -0.86
PCDHGB4-201ENST00000519479 HSBP1L1C9JCN9 74 aa9.69□□□□□ -0.86
PCDHGB4-201ENST00000519479 FAM90A15PP0C7V4 464 aa9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms