RNA–Protein interactions for RNA: ENST00000519254.2

CLN8-204, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLN8, Length 1,769 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-204ENST00000519254 FXYD6-FXYD2A0A087WZ82 144 aa12.1□□□□□ -0.47
CLN8-204ENST00000519254 TRBV6-7A0A0A0MS04 114 aa12.1□□□□□ -0.47
CLN8-204ENST00000519254 IGKV1D-13A0A0B4J2D9 117 aa12.1□□□□□ -0.47
CLN8-204ENST00000519254 C13orf42A0A1B0GVH6 325 aa12.1□□□□□ -0.47
CLN8-204ENST00000519254 C5orf51A6NDU8 294 aa12.1□□□□□ -0.47
CLN8-204ENST00000519254 TSC22D2O75157 780 aa12.1□□□□□ -0.47
CLN8-204ENST00000519254 GOSR1O95249 250 aa12.1□□□□□ -0.47
CLN8-204ENST00000519254 DIRAS3O95661 229 aa12.1□□□□□ -0.47
CLN8-204ENST00000519254 CYB5R3P00387 301 aaPredicted RBP12.1□□□□□ -0.47
CLN8-204ENST00000519254 LHBP01229 141 aa12.1□□□□□ -0.47
CLN8-204ENST00000519254 IGKV1-13P0DP09 117 aa12.1□□□□□ -0.47
CLN8-204ENST00000519254 PPOXP50336 477 aa12.1□□□□□ -0.47
CLN8-204ENST00000519254 C11orf71Q6IPW1 123 aa12.1□□□□□ -0.47
CLN8-204ENST00000519254 GSG1LQ6UXU4 331 aa12.1□□□□□ -0.47
CLN8-204ENST00000519254 GCSAMQ8N6F7 178 aa12.1□□□□□ -0.47
CLN8-204ENST00000519254 CD177Q8N6Q3 437 aa12.1□□□□□ -0.47
CLN8-204ENST00000519254 GALNT14Q96FL9 552 aa12.1□□□□□ -0.47
CLN8-204ENST00000519254 KIRREL1Q96J84 757 aa12.1□□□□□ -0.47
CLN8-204ENST00000519254 TRAPPC2LQ9UL33 140 aa12.1□□□□□ -0.47
CLN8-204ENST00000519254 COL12A1Q99715 3063 aa12.1□□□□□ -0.47
CLN8-204ENST00000519254 MPTX1A8MV57 137 aa12.1□□□□□ -0.47
CLN8-204ENST00000519254 ATP6V1G1O75348 118 aa12.1□□□□□ -0.47
CLN8-204ENST00000519254 PSG2P11465 335 aa12.1□□□□□ -0.47
CLN8-204ENST00000519254 IRF2P14316 349 aa12.1□□□□□ -0.47
CLN8-204ENST00000519254 OR3A1P47881 315 aa12.1□□□□□ -0.47
CLN8-204ENST00000519254 COL10A1Q03692 680 aa12.1□□□□□ -0.47
CLN8-204ENST00000519254 TMEM187Q14656 261 aa12.1□□□□□ -0.47
CLN8-204ENST00000519254 DTX2Q86UW9 622 aa12.1□□□□□ -0.47
CLN8-204ENST00000519254 LDLRAD3Q86YD5 345 aa12.1□□□□□ -0.47
CLN8-204ENST00000519254 H1FOOQ8IZA3 346 aaPredicted RBP12.1□□□□□ -0.47
CLN8-204ENST00000519254 PPP1R1CQ8WVI7 109 aa12.1□□□□□ -0.47
CLN8-204ENST00000519254 DCAF16Q9NXF7 216 aa12.1□□□□□ -0.47
CLN8-204ENST00000519254 RNF7Q9UBF6 113 aa12.1□□□□□ -0.47
CLN8-204ENST00000519254 HRNRQ86YZ3 2850 aaPredicted RBP12.1□□□□□ -0.47
CLN8-204ENST00000519254 ARFGEF3Q5TH69 2177 aa12.09□□□□□ -0.47
CLN8-204ENST00000519254 IGKV1D-17A0A075B6S4 117 aa12.09□□□□□ -0.47
CLN8-204ENST00000519254 NPIPB11E5RHQ5 1161 aa12.09□□□□□ -0.47
CLN8-204ENST00000519254 ARPC5O15511 151 aa12.09□□□□□ -0.47
CLN8-204ENST00000519254 MPC2O95563 127 aa12.09□□□□□ -0.47
CLN8-204ENST00000519254 PRDX2P32119 198 aa12.09□□□□□ -0.47
CLN8-204ENST00000519254 CD80P33681 288 aa12.09□□□□□ -0.47
CLN8-204ENST00000519254 CDKN1AP38936 164 aa12.09□□□□□ -0.47
CLN8-204ENST00000519254 TLE4Q04727 773 aa12.09□□□□□ -0.47
CLN8-204ENST00000519254 FGL1Q08830 312 aa12.09□□□□□ -0.47
CLN8-204ENST00000519254 HMGN3Q15651 99 aa12.09□□□□□ -0.47
CLN8-204ENST00000519254 SP6Q3SY56 376 aa12.09□□□□□ -0.47
CLN8-204ENST00000519254 FAM201AQ5SY85 155 aa12.09□□□□□ -0.47
CLN8-204ENST00000519254 SLC35E4Q6ICL7 350 aa12.09□□□□□ -0.47
CLN8-204ENST00000519254 RAI1Q7Z5J4 1906 aaPredicted RBP12.09□□□□□ -0.47
CLN8-204ENST00000519254 FAM90A1Q86YD7 464 aa12.09□□□□□ -0.47
CLN8-204ENST00000519254 OR10J5Q8NHC4 309 aa12.09□□□□□ -0.47
CLN8-204ENST00000519254 SECTM1Q8WVN6 248 aa12.09□□□□□ -0.47
CLN8-204ENST00000519254 CCL17Q92583 94 aa12.09□□□□□ -0.47
CLN8-204ENST00000519254 COQ2Q96H96 371 aa12.09□□□□□ -0.47
CLN8-204ENST00000519254 OR10C1Q96KK4 312 aa12.09□□□□□ -0.47
CLN8-204ENST00000519254 NMES1Q9C002 83 aa12.09□□□□□ -0.47
CLN8-204ENST00000519254 SHARPINQ9H0F6 387 aa12.09□□□□□ -0.47
CLN8-204ENST00000519254 DNAJB11Q9UBS4 358 aa12.09□□□□□ -0.47
CLN8-204ENST00000519254 ARID1AO14497 2285 aa12.09□□□□□ -0.47
CLN8-204ENST00000519254 IGHV3OR15-7A0A075B7D8 119 aa12.08□□□□□ -0.48
CLN8-204ENST00000519254 TMEM30CPA0ZSE6 113 aa12.08□□□□□ -0.48
CLN8-204ENST00000519254 L7N2F9 121 aa12.08□□□□□ -0.48
CLN8-204ENST00000519254 SNAPC5O75971 98 aa12.08□□□□□ -0.48
CLN8-204ENST00000519254 HOXB5P09067 269 aa12.08□□□□□ -0.48
CLN8-204ENST00000519254 OR5AC1P0C628 307 aa12.08□□□□□ -0.48
CLN8-204ENST00000519254 SLC25A4P12235 298 aa12.08□□□□□ -0.48
CLN8-204ENST00000519254 AESQ08117 197 aa12.08□□□□□ -0.48
CLN8-204ENST00000519254 LRRC37A5PQ49AS3 106 aa12.08□□□□□ -0.48
CLN8-204ENST00000519254 C11orf87Q6NUJ2 197 aa12.08□□□□□ -0.48
CLN8-204ENST00000519254 TMEM65Q6PI78 240 aa12.08□□□□□ -0.48
CLN8-204ENST00000519254 Q8TCH9 128 aa12.08□□□□□ -0.48
CLN8-204ENST00000519254 IL1F10Q8WWZ1 152 aa12.08□□□□□ -0.48
CLN8-204ENST00000519254 ERGIC1Q969X5 290 aa12.08□□□□□ -0.48
CLN8-204ENST00000519254 SLC5A7Q9GZV3 580 aa12.08□□□□□ -0.48
CLN8-204ENST00000519254 RAB1BQ9H0U4 201 aa12.08□□□□□ -0.48
CLN8-204ENST00000519254 METTL8Q9H825 291 aaKnown RBP12.08□□□□□ -0.48
CLN8-204ENST00000519254 SEBOXQ9HB31 216 aaPredicted RBP12.08□□□□□ -0.48
CLN8-204ENST00000519254 RDH8Q9NYR8 311 aa12.08□□□□□ -0.48
CLN8-204ENST00000519254 COMMD9Q9P000 198 aa12.08□□□□□ -0.48
CLN8-204ENST00000519254 OR1A1Q9P1Q5 309 aa12.08□□□□□ -0.48
CLN8-204ENST00000519254 KIF25Q9UIL4 384 aa12.08□□□□□ -0.48
CLN8-204ENST00000519254 KCNIP3Q9Y2W7 256 aa12.08□□□□□ -0.48
CLN8-204ENST00000519254 SPTAN1Q13813 2472 aaKnown RBP12.08□□□□□ -0.48
CLN8-204ENST00000519254 DSCAML1Q8TD84 2053 aa12.08□□□□□ -0.48
CLN8-204ENST00000519254 IGHV1-69-2A0A0G2JMI3 117 aa12.07□□□□□ -0.48
CLN8-204ENST00000519254 LRRC30A6NM36 301 aa12.07□□□□□ -0.48
CLN8-204ENST00000519254 MPPED1O15442 326 aa12.07□□□□□ -0.48
CLN8-204ENST00000519254 ZNF737O75373 536 aa12.07□□□□□ -0.48
CLN8-204ENST00000519254 RND3P61587 244 aa12.07□□□□□ -0.48
CLN8-204ENST00000519254 CYCSP99999 105 aaKnown RBP12.07□□□□□ -0.48
CLN8-204ENST00000519254 OPCMLQ14982 345 aa12.07□□□□□ -0.48
CLN8-204ENST00000519254 ZNF818PQ6ZRF7 136 aa12.07□□□□□ -0.48
CLN8-204ENST00000519254 CCDC71LQ8N9Z2 235 aa12.07□□□□□ -0.48
CLN8-204ENST00000519254 UBALD1Q8TB05 177 aa12.07□□□□□ -0.48
CLN8-204ENST00000519254 GLYATL2Q8WU03 294 aa12.07□□□□□ -0.48
CLN8-204ENST00000519254 SUCNR1Q9BXA5 334 aa12.07□□□□□ -0.48
CLN8-204ENST00000519254 PLEKHF2Q9H8W4 249 aa12.07□□□□□ -0.48
CLN8-204ENST00000519254 TAF9BQ9HBM6 251 aa12.07□□□□□ -0.48
CLN8-204ENST00000519254 OR2W1Q9Y3N9 320 aa12.07□□□□□ -0.48
CLN8-204ENST00000519254 LYNX1G3V0Z9 82 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms