RNA–Protein interactions for RNA: ENST00000518743.1

HMGB1P23-201, Transcript of high mobility group box 1 pseudogene 23, humanhuman

BASIC

Gene HMGB1P23, Length 568 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P23-201ENST00000518743 IGKV3-11P04433 115 aa3.3□□□□□ -1.88
HMGB1P23-201ENST00000518743 GIG44P09565 113 aaPredicted RBP3.3□□□□□ -1.88
HMGB1P23-201ENST00000518743 IGKV1-13P0DP09 117 aa3.3□□□□□ -1.88
HMGB1P23-201ENST00000518743 CRISP2P16562 243 aa3.3□□□□□ -1.88
HMGB1P23-201ENST00000518743 RAB5AP20339 215 aa3.3□□□□□ -1.88
HMGB1P23-201ENST00000518743 PRKACBP22694 351 aa3.3□□□□□ -1.88
HMGB1P23-201ENST00000518743 ME2P23368 584 aa3.3□□□□□ -1.88
HMGB1P23-201ENST00000518743 HRH1P35367 487 aa3.3□□□□□ -1.88
HMGB1P23-201ENST00000518743 RAB25P57735 213 aa3.3□□□□□ -1.88
HMGB1P23-201ENST00000518743 TAS2R39P59534 338 aa3.3□□□□□ -1.88
HMGB1P23-201ENST00000518743 CCL8P80075 99 aa3.3□□□□□ -1.88
HMGB1P23-201ENST00000518743 HMGCS1Q01581 520 aa3.3□□□□□ -1.88
HMGB1P23-201ENST00000518743 STX5Q13190 355 aa3.3□□□□□ -1.88
HMGB1P23-201ENST00000518743 MAD2L1BPQ15013 274 aaPredicted RBP3.3□□□□□ -1.88
HMGB1P23-201ENST00000518743 RPEL1Q2QD12 228 aa3.3□□□□□ -1.88
HMGB1P23-201ENST00000518743 NCBP2-AS2Q69YL0 99 aa3.3□□□□□ -1.88
HMGB1P23-201ENST00000518743 LCN12Q6JVE5 192 aa3.3□□□□□ -1.88
HMGB1P23-201ENST00000518743 WDR82Q6UXN9 313 aa3.3□□□□□ -1.88
HMGB1P23-201ENST00000518743 NPSR1Q6W5P4 371 aa3.3□□□□□ -1.88
HMGB1P23-201ENST00000518743 CCDC121Q6ZUS5 278 aa3.3□□□□□ -1.88
HMGB1P23-201ENST00000518743 MBOAT2Q6ZWT7 520 aa3.3□□□□□ -1.88
HMGB1P23-201ENST00000518743 OR2W3Q7Z3T1 314 aa3.3□□□□□ -1.88
HMGB1P23-201ENST00000518743 MYPOPQ86VE0 399 aaPredicted RBP3.3□□□□□ -1.88
HMGB1P23-201ENST00000518743 TMEM61Q8N0U2 210 aa3.3□□□□□ -1.88
HMGB1P23-201ENST00000518743 VKORC1L1Q8N0U8 176 aa3.3□□□□□ -1.88
HMGB1P23-201ENST00000518743 CBR4Q8N4T8 237 aa3.3□□□□□ -1.88
HMGB1P23-201ENST00000518743 OR6Q1Q8NGQ2 317 aa3.3□□□□□ -1.88
HMGB1P23-201ENST00000518743 OR6K6Q8NGW6 343 aa3.3□□□□□ -1.88
HMGB1P23-201ENST00000518743 OR4S2Q8NH73 311 aa3.3□□□□□ -1.88
HMGB1P23-201ENST00000518743 OR2V1Q8NHB1 315 aa3.3□□□□□ -1.88
HMGB1P23-201ENST00000518743 CD300LFQ8TDQ1 290 aa3.3□□□□□ -1.88
HMGB1P23-201ENST00000518743 APH1BQ8WW43 257 aa3.3□□□□□ -1.88
HMGB1P23-201ENST00000518743 DCUN1D4Q92564 292 aa3.3□□□□□ -1.88
HMGB1P23-201ENST00000518743 DUS3LQ96G46 650 aaKnown RBP3.3□□□□□ -1.88
HMGB1P23-201ENST00000518743 ALS2CR12Q96Q35 445 aa3.3□□□□□ -1.88
HMGB1P23-201ENST00000518743 PYGO2Q9BRQ0 406 aa3.3□□□□□ -1.88
HMGB1P23-201ENST00000518743 GABARAPL3Q9BY60 117 aa3.3□□□□□ -1.88
HMGB1P23-201ENST00000518743 DSN1Q9H410 356 aa3.3□□□□□ -1.88
HMGB1P23-201ENST00000518743 SLC7A10Q9NS82 523 aa3.3□□□□□ -1.88
HMGB1P23-201ENST00000518743 ZNF256Q9Y2P7 627 aaPredicted RBP3.3□□□□□ -1.88
HMGB1P23-201ENST00000518743 VPS13DQ5THJ4 4388 aa3.3□□□□□ -1.88
HMGB1P23-201ENST00000518743 DNAH2Q9P225 4427 aa3.29□□□□□ -1.88
HMGB1P23-201ENST00000518743 IGHV1-18A0A0C4DH31 117 aa3.29□□□□□ -1.88
HMGB1P23-201ENST00000518743 IGHV1-69-2A0A0G2JMI3 117 aa3.29□□□□□ -1.88
HMGB1P23-201ENST00000518743 ZNF99A8MXY4 864 aaPredicted RBP3.29□□□□□ -1.88
HMGB1P23-201ENST00000518743 HSBP1L1C9JCN9 74 aa3.29□□□□□ -1.88
HMGB1P23-201ENST00000518743 KRTAP4-16G5E9R7 235 aaPredicted RBP3.29□□□□□ -1.88
HMGB1P23-201ENST00000518743 PLPP1O14494 284 aa3.29□□□□□ -1.88
HMGB1P23-201ENST00000518743 PHOX2AO14813 284 aa3.29□□□□□ -1.88
HMGB1P23-201ENST00000518743 SIVA1O15304 175 aa3.29□□□□□ -1.88
HMGB1P23-201ENST00000518743 HDAC3O15379 428 aa3.29□□□□□ -1.88
HMGB1P23-201ENST00000518743 ERI3O43414 337 aaKnown RBP3.29□□□□□ -1.88
HMGB1P23-201ENST00000518743 PAHP00439 452 aa3.29□□□□□ -1.88
HMGB1P23-201ENST00000518743 BGLAPP02818 100 aa3.29□□□□□ -1.88
HMGB1P23-201ENST00000518743 OPN1SWP03999 348 aa3.29□□□□□ -1.88
HMGB1P23-201ENST00000518743 ERGP11308 486 aa3.29□□□□□ -1.88
HMGB1P23-201ENST00000518743 RAB4AP20338 218 aa3.29□□□□□ -1.88
HMGB1P23-201ENST00000518743 ZNF140P52738 457 aaPredicted RBP3.29□□□□□ -1.88
HMGB1P23-201ENST00000518743 HERVK_113P61574 105 aa3.29□□□□□ -1.88
HMGB1P23-201ENST00000518743 TBPL1P62380 186 aa3.29□□□□□ -1.88
HMGB1P23-201ENST00000518743 MXD1Q05195 221 aa3.29□□□□□ -1.88
HMGB1P23-201ENST00000518743 UNC119Q13432 240 aa3.29□□□□□ -1.88
HMGB1P23-201ENST00000518743 ZNF726P1Q15940 193 aa3.29□□□□□ -1.88
HMGB1P23-201ENST00000518743 ZNF239Q16600 458 aaKnown RBP3.29□□□□□ -1.88
HMGB1P23-201ENST00000518743 EXOC3L4Q17RC7 722 aa3.29□□□□□ -1.88
HMGB1P23-201ENST00000518743 KCTD19Q17RG1 926 aaPredicted RBP3.29□□□□□ -1.88
HMGB1P23-201ENST00000518743 C5orf64Q2M2E5 130 aa3.29□□□□□ -1.88
HMGB1P23-201ENST00000518743 OTPQ5XKR4 325 aa3.29□□□□□ -1.88
HMGB1P23-201ENST00000518743 CLEC6AQ6EIG7 209 aa3.29□□□□□ -1.88
HMGB1P23-201ENST00000518743 PTRHD1Q6GMV3 140 aaKnown RBP3.29□□□□□ -1.88
HMGB1P23-201ENST00000518743 ZNF774Q6NX45 483 aa3.29□□□□□ -1.88
HMGB1P23-201ENST00000518743 THOC6Q86W42 341 aaKnown RBP3.29□□□□□ -1.88
HMGB1P23-201ENST00000518743 ZNF101Q8IZC7 436 aa3.29□□□□□ -1.88
HMGB1P23-201ENST00000518743 NT5CQ8TCD5 201 aa3.29□□□□□ -1.88
HMGB1P23-201ENST00000518743 HGDQ93099 445 aa3.29□□□□□ -1.88
HMGB1P23-201ENST00000518743 RCN3Q96D15 328 aa3.29□□□□□ -1.88
HMGB1P23-201ENST00000518743 GALNT14Q96FL9 552 aa3.29□□□□□ -1.88
HMGB1P23-201ENST00000518743 TM2D3Q9BRN9 247 aa3.29□□□□□ -1.88
HMGB1P23-201ENST00000518743 ZNF649Q9BS31 505 aa3.29□□□□□ -1.88
HMGB1P23-201ENST00000518743 ARMC7Q9H6L4 198 aa3.29□□□□□ -1.88
HMGB1P23-201ENST00000518743 ZNF442Q9H7R0 627 aa3.29□□□□□ -1.88
HMGB1P23-201ENST00000518743 NANOGQ9H9S0 305 aa3.29□□□□□ -1.88
HMGB1P23-201ENST00000518743 VCX3AQ9NNX9 186 aa3.29□□□□□ -1.88
HMGB1P23-201ENST00000518743 ADA2Q9NZK5 511 aa3.29□□□□□ -1.88
HMGB1P23-201ENST00000518743 MED11Q9P086 117 aa3.29□□□□□ -1.88
HMGB1P23-201ENST00000518743 HEY1Q9Y5J3 304 aa3.29□□□□□ -1.88
HMGB1P23-201ENST00000518743 APOBP04114 4563 aaKnown RBP3.29□□□□□ -1.88
HMGB1P23-201ENST00000518743 TNCP24821 2201 aa3.28□□□□□ -1.88
HMGB1P23-201ENST00000518743 IGHV3-15A0A0B4J1V0 119 aa3.28□□□□□ -1.88
HMGB1P23-201ENST00000518743 TCRBV4S1A1TA0A5B7 111 aa3.28□□□□□ -1.88
HMGB1P23-201ENST00000518743 PRSS37A4D1T9 235 aa3.28□□□□□ -1.88
HMGB1P23-201ENST00000518743 OR51F1A6NGY5 319 aa3.28□□□□□ -1.88
HMGB1P23-201ENST00000518743 C17orf51A8MQB3 221 aa3.28□□□□□ -1.88
HMGB1P23-201ENST00000518743 C4orf51C9J302 202 aa3.28□□□□□ -1.88
HMGB1P23-201ENST00000518743 UGT2B11O75310 529 aa3.28□□□□□ -1.88
HMGB1P23-201ENST00000518743 MPDU1O75352 247 aa3.28□□□□□ -1.88
HMGB1P23-201ENST00000518743 SCELO95171 688 aa3.28□□□□□ -1.88
HMGB1P23-201ENST00000518743 UTS2O95399 124 aa3.28□□□□□ -1.88
HMGB1P23-201ENST00000518743 KLK1P06870 262 aa3.28□□□□□ -1.88
HMGB1P23-201ENST00000518743 FGF8P55075 233 aaPredicted RBP3.28□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 95.1 ms