RNA–Protein interactions for RNA: ENST00000518569.1

VPS13B-207, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 3

Gene VPS13B, Length 531 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-207ENST00000518569 RGP1Q92546 391 aaPredicted RBP2.35□□□□□ -2.03
VPS13B-207ENST00000518569 RDH5Q92781 318 aa2.35□□□□□ -2.03
VPS13B-207ENST00000518569 FAM104AQ969W3 186 aa2.35□□□□□ -2.03
VPS13B-207ENST00000518569 EXOSC8Q96B26 276 aaKnown RBP2.35□□□□□ -2.03
VPS13B-207ENST00000518569 BORCS7Q96B45 105 aa2.35□□□□□ -2.03
VPS13B-207ENST00000518569 RPUSD4Q96CM3 377 aaKnown RBP2.35□□□□□ -2.03
VPS13B-207ENST00000518569 ZMYND19Q96E35 227 aaPredicted RBP2.35□□□□□ -2.03
VPS13B-207ENST00000518569 CAPZA3Q96KX2 299 aa2.35□□□□□ -2.03
VPS13B-207ENST00000518569 PPP1R2P1Q96PQ5 205 aa2.35□□□□□ -2.03
VPS13B-207ENST00000518569 RASL11BQ9BPW5 248 aa2.35□□□□□ -2.03
VPS13B-207ENST00000518569 VPS25Q9BRG1 176 aa2.35□□□□□ -2.03
VPS13B-207ENST00000518569 TMEM70Q9BUB7 260 aa2.35□□□□□ -2.03
VPS13B-207ENST00000518569 OSBPL11Q9BXB4 747 aa2.35□□□□□ -2.03
VPS13B-207ENST00000518569 YIPF3Q9GZM5 350 aa2.35□□□□□ -2.03
VPS13B-207ENST00000518569 COA1Q9GZY4 146 aa2.35□□□□□ -2.03
VPS13B-207ENST00000518569 RPF2Q9H7B2 306 aaKnown RBP2.35□□□□□ -2.03
VPS13B-207ENST00000518569 REEP1Q9H902 201 aa2.35□□□□□ -2.03
VPS13B-207ENST00000518569 ENY2Q9NPA8 101 aa2.35□□□□□ -2.03
VPS13B-207ENST00000518569 DNAJC27Q9NZQ0 273 aa2.35□□□□□ -2.03
VPS13B-207ENST00000518569 COPZ2Q9P299 210 aa2.35□□□□□ -2.03
VPS13B-207ENST00000518569 DKKL1Q9UK85 242 aa2.35□□□□□ -2.03
VPS13B-207ENST00000518569 CES1P1Q9UKY3 287 aa2.35□□□□□ -2.03
VPS13B-207ENST00000518569 TRAPPC4Q9Y296 219 aa2.35□□□□□ -2.03
VPS13B-207ENST00000518569 UFC1Q9Y3C8 167 aa2.35□□□□□ -2.03
VPS13B-207ENST00000518569 ASB4Q9Y574 426 aa2.35□□□□□ -2.03
VPS13B-207ENST00000518569 TMEM56-RWDD3S4R434 201 aa2.35□□□□□ -2.03
VPS13B-207ENST00000518569 NEXMIFQ5QGS0 1516 aa2.35□□□□□ -2.03
VPS13B-207ENST00000518569 DUOX2Q9NRD8 1548 aa2.35□□□□□ -2.03
VPS13B-207ENST00000518569 CDC42BPGQ6DT37 1551 aa2.35□□□□□ -2.03
VPS13B-207ENST00000518569 TNRC6CQ9HCJ0 1690 aaKnown RBP2.34□□□□□ -2.03
VPS13B-207ENST00000518569 CASP8AP2Q9UKL3 1982 aa2.34□□□□□ -2.03
VPS13B-207ENST00000518569 ITSN1Q15811 1721 aa2.34□□□□□ -2.03
VPS13B-207ENST00000518569 COL24A1Q17RW2 1714 aa2.34□□□□□ -2.03
VPS13B-207ENST00000518569 PEAK1Q9H792 1746 aa2.34□□□□□ -2.03
VPS13B-207ENST00000518569 TRPM3Q9HCF6 1732 aaPredicted RBP2.34□□□□□ -2.03
VPS13B-207ENST00000518569 PPLO60437 1756 aa2.34□□□□□ -2.03
VPS13B-207ENST00000518569 A0A1B0GW55 424 aa2.34□□□□□ -2.03
VPS13B-207ENST00000518569 PRORSD1PA6NEY8 169 aa2.34□□□□□ -2.03
VPS13B-207ENST00000518569 CEACAM18A8MTB9 384 aa2.34□□□□□ -2.03
VPS13B-207ENST00000518569 C5orf58C9J3I9 102 aa2.34□□□□□ -2.03
VPS13B-207ENST00000518569 ZNF878C9JN71 531 aa2.34□□□□□ -2.03
VPS13B-207ENST00000518569 ANKRD65E5RJM6 399 aa2.34□□□□□ -2.03
VPS13B-207ENST00000518569 E7EQ34 232 aa2.34□□□□□ -2.03
VPS13B-207ENST00000518569 TRAPPC2LH3BP13 241 aa2.34□□□□□ -2.03
VPS13B-207ENST00000518569 C15orf65H3BRN8 121 aa2.34□□□□□ -2.03
VPS13B-207ENST00000518569 MANBAO00462 879 aa2.34□□□□□ -2.03
VPS13B-207ENST00000518569 COPEO14579 308 aa2.34□□□□□ -2.03
VPS13B-207ENST00000518569 AGPAT2O15120 278 aa2.34□□□□□ -2.03
VPS13B-207ENST00000518569 RTL8CO15255 209 aa2.34□□□□□ -2.03
VPS13B-207ENST00000518569 RAD51CO43502 376 aa2.34□□□□□ -2.03
VPS13B-207ENST00000518569 UPK1BO75841 260 aa2.34□□□□□ -2.03
VPS13B-207ENST00000518569 OR7C1O76099 320 aaPredicted RBP2.34□□□□□ -2.03
VPS13B-207ENST00000518569 GADD45GO95257 159 aa2.34□□□□□ -2.03
VPS13B-207ENST00000518569 TTC4O95801 387 aa2.34□□□□□ -2.03
VPS13B-207ENST00000518569 PTHP01270 115 aa2.34□□□□□ -2.03
VPS13B-207ENST00000518569 IFNGP01579 166 aa2.34□□□□□ -2.03
VPS13B-207ENST00000518569 IGHV2-5P01817 119 aa2.34□□□□□ -2.03
VPS13B-207ENST00000518569 APOA2P02652 100 aa2.34□□□□□ -2.03
VPS13B-207ENST00000518569 IFNA4P05014 189 aa2.34□□□□□ -2.03
VPS13B-207ENST00000518569 KLK3P07288 261 aaPredicted RBP2.34□□□□□ -2.03
VPS13B-207ENST00000518569 BPGMP07738 259 aa2.34□□□□□ -2.03
VPS13B-207ENST00000518569 CHTF8P0CG12 524 aa2.34□□□□□ -2.03
VPS13B-207ENST00000518569 DUX4L2P0CJ85 424 aa2.34□□□□□ -2.03
VPS13B-207ENST00000518569 DUX4L3P0CJ86 424 aa2.34□□□□□ -2.03
VPS13B-207ENST00000518569 DUX4L5P0CJ88 424 aa2.34□□□□□ -2.03
VPS13B-207ENST00000518569 DUX4L6P0CJ89 424 aa2.34□□□□□ -2.03
VPS13B-207ENST00000518569 DUX4L7P0CJ90 424 aa2.34□□□□□ -2.03
VPS13B-207ENST00000518569 ZNF250P15622 560 aa2.34□□□□□ -2.03
VPS13B-207ENST00000518569 CEACAM6P40199 344 aa2.34□□□□□ -2.03
VPS13B-207ENST00000518569 OR10A3P58181 314 aa2.34□□□□□ -2.03
VPS13B-207ENST00000518569 ELF3P78545 371 aaPredicted RBP2.34□□□□□ -2.03
VPS13B-207ENST00000518569 MRPS10P82664 201 aaKnown RBP2.34□□□□□ -2.03
VPS13B-207ENST00000518569 FAM53BQ14153 422 aa2.34□□□□□ -2.03
VPS13B-207ENST00000518569 OR1Q1Q15612 314 aa2.34□□□□□ -2.03
VPS13B-207ENST00000518569 ACSBG2Q5FVE4 666 aa2.34□□□□□ -2.03
VPS13B-207ENST00000518569 TNFAIP8L3Q5GJ75 292 aa2.34□□□□□ -2.03
VPS13B-207ENST00000518569 CLEC12AQ5QGZ9 265 aa2.34□□□□□ -2.03
VPS13B-207ENST00000518569 SYT6Q5T7P8 510 aaPredicted RBP2.34□□□□□ -2.03
VPS13B-207ENST00000518569 DUX4L9Q6RFH8 374 aaPredicted RBP2.34□□□□□ -2.03
VPS13B-207ENST00000518569 SPNS3Q6ZMD2 512 aa2.34□□□□□ -2.03
VPS13B-207ENST00000518569 FAM231DQ6ZW35 169 aa2.34□□□□□ -2.03
VPS13B-207ENST00000518569 ZNF429Q86V71 674 aa2.34□□□□□ -2.03
VPS13B-207ENST00000518569 COMMD7Q86VX2 200 aa2.34□□□□□ -2.03
VPS13B-207ENST00000518569 LRRC28Q86X40 367 aaPredicted RBP2.34□□□□□ -2.03
VPS13B-207ENST00000518569 RAB43Q86YS6 212 aa2.34□□□□□ -2.03
VPS13B-207ENST00000518569 EIF4E3Q8N5X7 224 aaKnown RBP2.34□□□□□ -2.03
VPS13B-207ENST00000518569 ZNF283Q8N7M2 679 aa2.34□□□□□ -2.03
VPS13B-207ENST00000518569 ARIH2OSQ8N7S6 290 aa2.34□□□□□ -2.03
VPS13B-207ENST00000518569 COX18Q8N8Q8 333 aa2.34□□□□□ -2.03
VPS13B-207ENST00000518569 GATD1Q8NB37 220 aa2.34□□□□□ -2.03
VPS13B-207ENST00000518569 MDS2Q8NDY4 140 aa2.34□□□□□ -2.03
VPS13B-207ENST00000518569 OR2Z1Q8NG97 314 aa2.34□□□□□ -2.03
VPS13B-207ENST00000518569 GPR32P1Q8NGA4 272 aa2.34□□□□□ -2.03
VPS13B-207ENST00000518569 MFSD8Q8NHS3 518 aa2.34□□□□□ -2.03
VPS13B-207ENST00000518569 CD200R1Q8TD46 325 aa2.34□□□□□ -2.03
VPS13B-207ENST00000518569 DCPSQ96C86 337 aaKnown RBP2.34□□□□□ -2.03
VPS13B-207ENST00000518569 OR10C1Q96KK4 312 aa2.34□□□□□ -2.03
VPS13B-207ENST00000518569 ZNF681Q96N22 645 aa2.34□□□□□ -2.03
VPS13B-207ENST00000518569 MS4A4EQ96PG1 132 aa2.34□□□□□ -2.03
VPS13B-207ENST00000518569 OR2M2Q96R28 347 aa2.34□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 101 ms