RNA–Protein interactions for RNA: ENST00000515144.5

TRIO-222, Transcript of trio Rho guanine nucleotide exchange factor, humanhuman

TSL 1 (best)

Gene TRIO, Length 7,455 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIO-222ENST00000515144 ZNF770Q6IQ21 691 aaPredicted RBP12.5□□□□□ -0.41
TRIO-222ENST00000515144 ANGPTL4Q9BY76 406 aa12.5□□□□□ -0.41
TRIO-222ENST00000515144 TMEM210A6NLX4 147 aa12.5□□□□□ -0.41
TRIO-222ENST00000515144 TAAR5O14804 337 aa12.5□□□□□ -0.41
TRIO-222ENST00000515144 OXA1LQ15070 435 aa12.5□□□□□ -0.41
TRIO-222ENST00000515144 ZNF519Q8TB69 540 aa12.5□□□□□ -0.41
TRIO-222ENST00000515144 STARD4Q96DR4 205 aa12.5□□□□□ -0.41
TRIO-222ENST00000515144 LFNGQ8NES3 379 aa12.5□□□□□ -0.41
TRIO-222ENST00000515144 GPHA2Q96T91 129 aa12.5□□□□□ -0.41
TRIO-222ENST00000515144 METTL1Q9UBP6 276 aaKnown RBP12.5□□□□□ -0.41
TRIO-222ENST00000515144 KPTNQ9Y664 436 aa12.5□□□□□ -0.41
TRIO-222ENST00000515144 SUCLG1P53597 346 aaKnown RBP12.5□□□□□ -0.41
TRIO-222ENST00000515144 DEGS2Q6QHC5 323 aa12.5□□□□□ -0.41
TRIO-222ENST00000515144 PDPNQ86YL7 162 aa12.5□□□□□ -0.41
TRIO-222ENST00000515144 TMEM204Q9BSN7 226 aa12.5□□□□□ -0.41
TRIO-222ENST00000515144 SLC52A3Q9NQ40 469 aa12.5□□□□□ -0.41
TRIO-222ENST00000515144 H7BYZ3 331 aa12.5□□□□□ -0.41
TRIO-222ENST00000515144 MIDNQ504T8 468 aa12.5□□□□□ -0.41
TRIO-222ENST00000515144 FAM181AQ8N9Y4 354 aa12.5□□□□□ -0.41
TRIO-222ENST00000515144 Q8WTZ3 238 aa12.5□□□□□ -0.41
TRIO-222ENST00000515144 PLEKHA2Q9HB19 425 aa12.5□□□□□ -0.41
TRIO-222ENST00000515144 HOXD4P09016 255 aaPredicted RBP12.49□□□□□ -0.41
TRIO-222ENST00000515144 FBP1P09467 338 aa12.49□□□□□ -0.41
TRIO-222ENST00000515144 PSG2P11465 335 aa12.49□□□□□ -0.41
TRIO-222ENST00000515144 RRN3P1Q2M238 152 aa12.49□□□□□ -0.41
TRIO-222ENST00000515144 SLC26A10Q8NG04 563 aa12.49□□□□□ -0.41
TRIO-222ENST00000515144 ZNF764Q96H86 408 aaPredicted RBP12.49□□□□□ -0.41
TRIO-222ENST00000515144 ADAD2Q8NCV1 583 aaKnown RBP12.49□□□□□ -0.41
TRIO-222ENST00000515144 ITPKCQ96DU7 683 aa12.49□□□□□ -0.41
TRIO-222ENST00000515144 TGIF2Q9GZN2 237 aa12.49□□□□□ -0.41
TRIO-222ENST00000515144 IGHV3-23P01764 117 aa12.49□□□□□ -0.41
TRIO-222ENST00000515144 ADIPOR1Q96A54 375 aa12.49□□□□□ -0.41
TRIO-222ENST00000515144 OR51B2Q9Y5P1 312 aa12.49□□□□□ -0.41
TRIO-222ENST00000515144 A0A1W2PPQ1 181 aa12.49□□□□□ -0.41
TRIO-222ENST00000515144 IGHV3-48P01763 117 aa12.49□□□□□ -0.41
TRIO-222ENST00000515144 LIMS3P0CW19 117 aa12.49□□□□□ -0.41
TRIO-222ENST00000515144 LIMS4P0CW20 117 aa12.49□□□□□ -0.41
TRIO-222ENST00000515144 AMTP48728 403 aa12.49□□□□□ -0.41
TRIO-222ENST00000515144 ZNF485Q8NCK3 441 aa12.49□□□□□ -0.41
TRIO-222ENST00000515144 PGA4P0DJD7 388 aa12.49□□□□□ -0.41
TRIO-222ENST00000515144 PGA3P0DJD8 388 aa12.49□□□□□ -0.41
TRIO-222ENST00000515144 CDKN1AP38936 164 aa12.49□□□□□ -0.41
TRIO-222ENST00000515144 BTG1P62324 171 aa12.49□□□□□ -0.41
TRIO-222ENST00000515144 P2RY6Q15077 328 aa12.49□□□□□ -0.41
TRIO-222ENST00000515144 XAF1Q6GPH4 301 aa12.49□□□□□ -0.41
TRIO-222ENST00000515144 MUC20Q8N307 709 aaPredicted RBP12.49□□□□□ -0.41
TRIO-222ENST00000515144 SCARB1Q8WTV0 552 aa12.49□□□□□ -0.41
TRIO-222ENST00000515144 IGHV1-69-2A0A0G2JMI3 117 aa12.49□□□□□ -0.41
TRIO-222ENST00000515144 GNG4P50150 75 aa12.49□□□□□ -0.41
TRIO-222ENST00000515144 C11orf44Q8N8P7 122 aa12.49□□□□□ -0.41
TRIO-222ENST00000515144 ZNF596Q8TC21 504 aa12.49□□□□□ -0.41
TRIO-222ENST00000515144 TIMP4Q99727 224 aa12.49□□□□□ -0.41
TRIO-222ENST00000515144 SH2D2AQ9NP31 389 aa12.49□□□□□ -0.41
TRIO-222ENST00000515144 NPAP1Q9NZP6 1156 aa12.49□□□□□ -0.41
TRIO-222ENST00000515144 ZDHHC8Q9ULC8 765 aa12.49□□□□□ -0.41
TRIO-222ENST00000515144 TRAV8-7A0A075B6U6 113 aa12.48□□□□□ -0.41
TRIO-222ENST00000515144 PPIAL4CA0A0B4J2A2 164 aa12.48□□□□□ -0.41
TRIO-222ENST00000515144 PPIAL4GP0DN37 164 aa12.48□□□□□ -0.41
TRIO-222ENST00000515144 DAOP14920 347 aa12.48□□□□□ -0.41
TRIO-222ENST00000515144 PKDREJQ9NTG1 2253 aa12.48□□□□□ -0.41
TRIO-222ENST00000515144 CD40P25942 277 aa12.48□□□□□ -0.41
TRIO-222ENST00000515144 EIF4EBP2Q13542 120 aaPredicted RBP12.48□□□□□ -0.41
TRIO-222ENST00000515144 ZNF552Q9H707 407 aaPredicted RBP12.48□□□□□ -0.41
TRIO-222ENST00000515144 A0A1W2PR77 199 aa12.48□□□□□ -0.41
TRIO-222ENST00000515144 GGNBP1Q5YKI7 109 aa12.48□□□□□ -0.41
TRIO-222ENST00000515144 FAM168AQ92567 244 aa12.48□□□□□ -0.41
TRIO-222ENST00000515144 CACFD1Q9UGQ2 172 aa12.48□□□□□ -0.41
TRIO-222ENST00000515144 NCKAP5O14513 1909 aa12.48□□□□□ -0.41
TRIO-222ENST00000515144 TANC1Q9C0D5 1861 aa12.48□□□□□ -0.41
TRIO-222ENST00000515144 IGHV3-35A0A0C4DH35 117 aa12.48□□□□□ -0.41
TRIO-222ENST00000515144 GZMHP20718 246 aa12.48□□□□□ -0.41
TRIO-222ENST00000515144 HLA-DRB3P79483 266 aa12.48□□□□□ -0.41
TRIO-222ENST00000515144 RNF24Q9Y225 148 aa12.48□□□□□ -0.41
TRIO-222ENST00000515144 TMSB15BA0A087X1C1 80 aa12.48□□□□□ -0.41
TRIO-222ENST00000515144 LMX1BO60663 402 aa12.48□□□□□ -0.41
TRIO-222ENST00000515144 DHRS2Q13268 280 aa12.48□□□□□ -0.41
TRIO-222ENST00000515144 DUSP18Q8NEJ0 188 aa12.48□□□□□ -0.41
TRIO-222ENST00000515144 SOSTQ9BQB4 213 aa12.48□□□□□ -0.41
TRIO-222ENST00000515144 ZNF385DQ9H6B1 395 aa12.48□□□□□ -0.41
TRIO-222ENST00000515144 ASAH1Q13510 395 aa12.48□□□□□ -0.41
TRIO-222ENST00000515144 CCDC144NLQ6NUI1 221 aa12.48□□□□□ -0.41
TRIO-222ENST00000515144 BVESQ8NE79 360 aa12.48□□□□□ -0.41
TRIO-222ENST00000515144 OR4X1Q8NH49 305 aa12.48□□□□□ -0.41
TRIO-222ENST00000515144 KLF14Q8TD94 323 aaPredicted RBP12.48□□□□□ -0.41
TRIO-222ENST00000515144 C16orf92Q96LL3 132 aa12.48□□□□□ -0.41
TRIO-222ENST00000515144 TUBA4BQ9H853 241 aa12.48□□□□□ -0.41
TRIO-222ENST00000515144 TMED3Q9Y3Q3 217 aa12.48□□□□□ -0.41
TRIO-222ENST00000515144 RAB29O14966 203 aa12.47□□□□□ -0.41
TRIO-222ENST00000515144 CD200P41217 278 aa12.47□□□□□ -0.41
TRIO-222ENST00000515144 SHISA5Q8N114 240 aa12.47□□□□□ -0.41
TRIO-222ENST00000515144 SMIM4Q8WVI0 70 aa12.47□□□□□ -0.41
TRIO-222ENST00000515144 CHRDL1Q9BU40 450 aa12.47□□□□□ -0.41
TRIO-222ENST00000515144 PJVKQ0ZLH3 352 aa12.47□□□□□ -0.41
TRIO-222ENST00000515144 RAB32Q13637 225 aa12.47□□□□□ -0.41
TRIO-222ENST00000515144 ENDOGQ14249 297 aaKnown RBP12.47□□□□□ -0.41
TRIO-222ENST00000515144 SSX1Q16384 188 aa12.47□□□□□ -0.41
TRIO-222ENST00000515144 PRSS53Q2L4Q9 553 aa12.47□□□□□ -0.41
TRIO-222ENST00000515144 MYPOPQ86VE0 399 aaPredicted RBP12.47□□□□□ -0.41
TRIO-222ENST00000515144 SIGLECL1Q8N7X8 197 aa12.47□□□□□ -0.41
TRIO-222ENST00000515144 RBPMSQ93062 196 aaKnown RBP12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 69.2 ms