RNA–Protein interactions for RNA: ENST00000514830.5

PDLIM5-220, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2

Gene PDLIM5, Length 802 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-220ENST00000514830 MRGPRDQ8TDS7 321 aa9.84□□□□□ -0.83
PDLIM5-220ENST00000514830 CABLES2Q9BTV7 478 aa9.84□□□□□ -0.83
PDLIM5-220ENST00000514830 WDR12Q9GZL7 423 aaKnown RBP9.84□□□□□ -0.83
PDLIM5-220ENST00000514830 TOLLIPQ9H0E2 274 aa9.84□□□□□ -0.83
PDLIM5-220ENST00000514830 SIRPDQ9H106 197 aa9.84□□□□□ -0.83
PDLIM5-220ENST00000514830 TAF9BQ9HBM6 251 aa9.84□□□□□ -0.83
PDLIM5-220ENST00000514830 ZNF286AQ9HBT8 521 aa9.84□□□□□ -0.83
PDLIM5-220ENST00000514830 MMP26Q9NRE1 261 aa9.84□□□□□ -0.83
PDLIM5-220ENST00000514830 CALYQ9NYX4 217 aa9.84□□□□□ -0.83
PDLIM5-220ENST00000514830 SPINT2O43291 252 aa9.83□□□□□ -0.84
PDLIM5-220ENST00000514830 CD5LO43866 347 aa9.83□□□□□ -0.84
PDLIM5-220ENST00000514830 RBBP9O75884 186 aa9.83□□□□□ -0.84
PDLIM5-220ENST00000514830 CTXN2P0C2S0 81 aa9.83□□□□□ -0.84
PDLIM5-220ENST00000514830 MMP9P14780 707 aa9.83□□□□□ -0.84
PDLIM5-220ENST00000514830 TBPP20226 339 aa9.83□□□□□ -0.84
PDLIM5-220ENST00000514830 PRTN3P24158 256 aa9.83□□□□□ -0.84
PDLIM5-220ENST00000514830 FPR2P25090 351 aa9.83□□□□□ -0.84
PDLIM5-220ENST00000514830 CD34P28906 385 aa9.83□□□□□ -0.84
PDLIM5-220ENST00000514830 DGCR2P98153 550 aa9.83□□□□□ -0.84
PDLIM5-220ENST00000514830 KRTAP1-1Q07627 177 aa9.83□□□□□ -0.84
PDLIM5-220ENST00000514830 DCAF12L2Q5VW00 463 aa9.83□□□□□ -0.84
PDLIM5-220ENST00000514830 STEAP3Q658P3 488 aa9.83□□□□□ -0.84
PDLIM5-220ENST00000514830 OR52W1Q6IF63 320 aa9.83□□□□□ -0.84
PDLIM5-220ENST00000514830 Q8N402 240 aa9.83□□□□□ -0.84
PDLIM5-220ENST00000514830 Q8N7P7 452 aa9.83□□□□□ -0.84
PDLIM5-220ENST00000514830 MAPK1IP1LQ8NDC0 245 aa9.83□□□□□ -0.84
PDLIM5-220ENST00000514830 BEST4Q8NFU0 473 aa9.83□□□□□ -0.84
PDLIM5-220ENST00000514830 FAM216AQ8WUB2 273 aa9.83□□□□□ -0.84
PDLIM5-220ENST00000514830 CCDC107Q8WV48 283 aa9.83□□□□□ -0.84
PDLIM5-220ENST00000514830 GCDHQ92947 438 aaPredicted RBP9.83□□□□□ -0.84
PDLIM5-220ENST00000514830 SNAPC3Q92966 411 aa9.83□□□□□ -0.84
PDLIM5-220ENST00000514830 TRIM63Q969Q1 353 aa9.83□□□□□ -0.84
PDLIM5-220ENST00000514830 ARL11Q969Q4 196 aa9.83□□□□□ -0.84
PDLIM5-220ENST00000514830 SDHCQ99643 169 aaPredicted RBP9.83□□□□□ -0.84
PDLIM5-220ENST00000514830 CCDC32Q9BV29 185 aa9.83□□□□□ -0.84
PDLIM5-220ENST00000514830 METTL8Q9H825 291 aaKnown RBP9.83□□□□□ -0.84
PDLIM5-220ENST00000514830 IFT46Q9NQC8 304 aa9.83□□□□□ -0.84
PDLIM5-220ENST00000514830 HIF1ANQ9NWT6 349 aa9.83□□□□□ -0.84
PDLIM5-220ENST00000514830 TAS2R8Q9NYW2 309 aa9.83□□□□□ -0.84
PDLIM5-220ENST00000514830 ANXA10Q9UJ72 324 aa9.83□□□□□ -0.84
PDLIM5-220ENST00000514830 FABP7O15540 132 aa9.82□□□□□ -0.84
PDLIM5-220ENST00000514830 HBZP02008 142 aa9.82□□□□□ -0.84
PDLIM5-220ENST00000514830 IGHV1-8P0DP01 117 aa9.82□□□□□ -0.84
PDLIM5-220ENST00000514830 CCL3L1P16619 93 aa9.82□□□□□ -0.84
PDLIM5-220ENST00000514830 SSTR5P35346 364 aa9.82□□□□□ -0.84
PDLIM5-220ENST00000514830 PPP5CP53041 499 aa9.82□□□□□ -0.84
PDLIM5-220ENST00000514830 LOXL3P58215 753 aa9.82□□□□□ -0.84
PDLIM5-220ENST00000514830 TAS2R46P59540 309 aa9.82□□□□□ -0.84
PDLIM5-220ENST00000514830 ZNF846Q147U1 533 aa9.82□□□□□ -0.84
PDLIM5-220ENST00000514830 ACTBL2Q562R1 376 aa9.82□□□□□ -0.84
PDLIM5-220ENST00000514830 PYDC2Q56P42 97 aa9.82□□□□□ -0.84
PDLIM5-220ENST00000514830 METTL11BQ5VVY1 283 aa9.82□□□□□ -0.84
PDLIM5-220ENST00000514830 LYSMD2Q8IV50 215 aa9.82□□□□□ -0.84
PDLIM5-220ENST00000514830 GVQW1Q8N7I0 195 aa9.82□□□□□ -0.84
PDLIM5-220ENST00000514830 C8orf31Q8N9H6 132 aa9.82□□□□□ -0.84
PDLIM5-220ENST00000514830 TMEM229BQ8NBD8 167 aa9.82□□□□□ -0.84
PDLIM5-220ENST00000514830 OR5AP2Q8NGF4 316 aa9.82□□□□□ -0.84
PDLIM5-220ENST00000514830 GALMQ96C23 342 aa9.82□□□□□ -0.84
PDLIM5-220ENST00000514830 KIRREL1Q96J84 757 aa9.82□□□□□ -0.84
PDLIM5-220ENST00000514830 THAP7Q9BT49 309 aaPredicted RBP9.82□□□□□ -0.84
PDLIM5-220ENST00000514830 ST6GALNAC5Q9BVH7 336 aa9.82□□□□□ -0.84
PDLIM5-220ENST00000514830 ING3Q9NXR8 418 aa9.82□□□□□ -0.84
PDLIM5-220ENST00000514830 IDI2-AS1Q9NZ38 188 aa9.82□□□□□ -0.84
PDLIM5-220ENST00000514830 KLK11Q9UBX7 282 aa9.82□□□□□ -0.84
PDLIM5-220ENST00000514830 ZNF230Q9UIE0 474 aaPredicted RBP9.82□□□□□ -0.84
PDLIM5-220ENST00000514830 JPT1Q9UK76 154 aa9.82□□□□□ -0.84
PDLIM5-220ENST00000514830 SESN1Q9Y6P5 492 aa9.82□□□□□ -0.84
PDLIM5-220ENST00000514830 TLN2Q9Y4G6 2542 aa9.82□□□□□ -0.84
PDLIM5-220ENST00000514830 IGKV1D-8A0A087WSZ0 117 aa9.81□□□□□ -0.84
PDLIM5-220ENST00000514830 TRBV6-7A0A0A0MS04 114 aa9.81□□□□□ -0.84
PDLIM5-220ENST00000514830 TRAV39A0A0B4J263 110 aa9.81□□□□□ -0.84
PDLIM5-220ENST00000514830 ITGB1BP1O14713 200 aa9.81□□□□□ -0.84
PDLIM5-220ENST00000514830 TGFAP01135 160 aa9.81□□□□□ -0.84
PDLIM5-220ENST00000514830 CD74P04233 296 aa9.81□□□□□ -0.84
PDLIM5-220ENST00000514830 CSF1P09603 554 aa9.81□□□□□ -0.84
PDLIM5-220ENST00000514830 GSTT2BP0CG30 244 aa9.81□□□□□ -0.84
PDLIM5-220ENST00000514830 ERVFRD-1P60508 538 aa9.81□□□□□ -0.84
PDLIM5-220ENST00000514830 HERPUD1Q15011 391 aa9.81□□□□□ -0.84
PDLIM5-220ENST00000514830 LCE2DQ5TA82 110 aaPredicted RBP9.81□□□□□ -0.84
PDLIM5-220ENST00000514830 NCR3LG1Q68D85 454 aa9.81□□□□□ -0.84
PDLIM5-220ENST00000514830 SETD6Q8TBK2 473 aa9.81□□□□□ -0.84
PDLIM5-220ENST00000514830 ZNF596Q8TC21 504 aa9.81□□□□□ -0.84
PDLIM5-220ENST00000514830 TNFRSF14Q92956 283 aa9.81□□□□□ -0.84
PDLIM5-220ENST00000514830 UPRTQ96BW1 309 aa9.81□□□□□ -0.84
PDLIM5-220ENST00000514830 TMPRSS13Q9BYE2 586 aa9.81□□□□□ -0.84
PDLIM5-220ENST00000514830 LPAR2Q9HBW0 351 aa9.81□□□□□ -0.84
PDLIM5-220ENST00000514830 TMEM160Q9NX00 188 aa9.81□□□□□ -0.84
PDLIM5-220ENST00000514830 GFOD1Q9NXC2 390 aa9.81□□□□□ -0.84
PDLIM5-220ENST00000514830 ONECUT1Q9UBC0 465 aa9.81□□□□□ -0.84
PDLIM5-220ENST00000514830 JMJD1CQ15652 2540 aa9.81□□□□□ -0.84
PDLIM5-220ENST00000514830 IGKV1-6A0A0C4DH72 117 aa9.8□□□□□ -0.84
PDLIM5-220ENST00000514830 ANKRD20A5PA0PJZ0 165 aa9.8□□□□□ -0.84
PDLIM5-220ENST00000514830 SMAD7O15105 426 aaKnown RBP9.8□□□□□ -0.84
PDLIM5-220ENST00000514830 YPEL1O60688 119 aa9.8□□□□□ -0.84
PDLIM5-220ENST00000514830 TOX4O94842 621 aa9.8□□□□□ -0.84
PDLIM5-220ENST00000514830 SCTP09683 121 aa9.8□□□□□ -0.84
PDLIM5-220ENST00000514830 GSTT2P0CG29 244 aa9.8□□□□□ -0.84
PDLIM5-220ENST00000514830 GDNFP39905 211 aa9.8□□□□□ -0.84
PDLIM5-220ENST00000514830 TAS2R19P59542 299 aa9.8□□□□□ -0.84
PDLIM5-220ENST00000514830 ARF6P62330 175 aa9.8□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 107.2 ms