RNA–Protein interactions for RNA: ENST00000514537.5

CLDND1-230, Transcript of claudin domain containing 1, humanhuman

TSL 3

Gene CLDND1, Length 1,013 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-230ENST00000514537 NDUFA11Q86Y39 141 aa18.36■□□□□ 0.53
CLDND1-230ENST00000514537 LYG1Q8N1E2 194 aa18.36■□□□□ 0.53
CLDND1-230ENST00000514537 OR4K15Q8NH41 348 aa18.36■□□□□ 0.53
CLDND1-230ENST00000514537 CITED2Q99967 270 aaPredicted RBP18.36■□□□□ 0.53
CLDND1-230ENST00000514537 CST11Q9H112 138 aa18.36■□□□□ 0.53
CLDND1-230ENST00000514537 VCX3BQ9H321 246 aa18.36■□□□□ 0.53
CLDND1-230ENST00000514537 TRAPPC2LQ9UL33 140 aa18.36■□□□□ 0.53
CLDND1-230ENST00000514537 C12orf77C9JDV5 145 aa18.35■□□□□ 0.53
CLDND1-230ENST00000514537 RGS10O43665 173 aa18.35■□□□□ 0.53
CLDND1-230ENST00000514537 LPLP06858 475 aa18.35■□□□□ 0.53
CLDND1-230ENST00000514537 UCHL1P09936 223 aa18.35■□□□□ 0.53
CLDND1-230ENST00000514537 UBBP0CG47 229 aa18.35■□□□□ 0.53
CLDND1-230ENST00000514537 CD37P11049 281 aa18.35■□□□□ 0.53
CLDND1-230ENST00000514537 TPBGQ13641 420 aa18.35■□□□□ 0.53
CLDND1-230ENST00000514537 NSUN5P1Q3KNT7 163 aa18.35■□□□□ 0.53
CLDND1-230ENST00000514537 Q3ZCU0 254 aa18.35■□□□□ 0.53
CLDND1-230ENST00000514537 HSD17B12Q53GQ0 312 aa18.35■□□□□ 0.53
CLDND1-230ENST00000514537 RBM48Q5RL73 367 aaKnown RBP18.35■□□□□ 0.53
CLDND1-230ENST00000514537 LIPKQ5VXJ0 399 aa18.35■□□□□ 0.53
CLDND1-230ENST00000514537 FAM53AQ6NSI3 398 aaPredicted RBP18.35■□□□□ 0.53
CLDND1-230ENST00000514537 UFD1Q92890 307 aa18.35■□□□□ 0.53
CLDND1-230ENST00000514537 FAM46BQ96A09 425 aa18.35■□□□□ 0.53
CLDND1-230ENST00000514537 IGHV3-43A0A0B4J1X8 118 aa18.34■□□□□ 0.53
CLDND1-230ENST00000514537 SH2D7A6NKC9 451 aaPredicted RBP18.34■□□□□ 0.53
CLDND1-230ENST00000514537 ADARB2-AS1A8MUL3 147 aa18.34■□□□□ 0.53
CLDND1-230ENST00000514537 HSD17B6O14756 317 aa18.34■□□□□ 0.53
CLDND1-230ENST00000514537 IGHV3-43DP0DP04 118 aa18.34■□□□□ 0.53
CLDND1-230ENST00000514537 CRHBPP24387 322 aa18.34■□□□□ 0.53
CLDND1-230ENST00000514537 ZNF816Q0VGE8 651 aaPredicted RBP18.34■□□□□ 0.53
CLDND1-230ENST00000514537 PDLIM3Q53GG5 364 aaPredicted RBP18.34■□□□□ 0.53
CLDND1-230ENST00000514537 C6orf183Q5T699 404 aa18.34■□□□□ 0.53
CLDND1-230ENST00000514537 OR5AU1Q8NGC0 362 aa18.34■□□□□ 0.53
CLDND1-230ENST00000514537 CYYR1Q96J86 154 aa18.34■□□□□ 0.53
CLDND1-230ENST00000514537 RAB9BQ9NP90 201 aa18.34■□□□□ 0.53
CLDND1-230ENST00000514537 ISYNA1Q9NPH2 558 aa18.34■□□□□ 0.53
CLDND1-230ENST00000514537 MOB4Q9Y3A3 225 aa18.34■□□□□ 0.53
CLDND1-230ENST00000514537 PRKDCP78527 4128 aaKnown RBP18.33■□□□□ 0.53
CLDND1-230ENST00000514537 UBE2QL1A1L167 161 aa18.33■□□□□ 0.52
CLDND1-230ENST00000514537 ERICH4A6NGS2 130 aa18.33■□□□□ 0.52
CLDND1-230ENST00000514537 SPINT2O43291 252 aa18.33■□□□□ 0.52
CLDND1-230ENST00000514537 PDCD6O75340 191 aa18.33■□□□□ 0.52
CLDND1-230ENST00000514537 MPIG6BO95866 241 aa18.33■□□□□ 0.52
CLDND1-230ENST00000514537 GAPDHP04406 335 aaKnown RBP18.33■□□□□ 0.52
CLDND1-230ENST00000514537 VSIG8P0DPA2 414 aa18.33■□□□□ 0.52
CLDND1-230ENST00000514537 CD83Q01151 205 aa18.33■□□□□ 0.52
CLDND1-230ENST00000514537 TMEM30BQ3MIR4 351 aa18.33■□□□□ 0.52
CLDND1-230ENST00000514537 CENPVQ7Z7K6 275 aaPredicted RBP18.33■□□□□ 0.52
CLDND1-230ENST00000514537 TMEM203Q969S6 136 aa18.33■□□□□ 0.52
CLDND1-230ENST00000514537 CCRL2O00421 344 aa18.32■□□□□ 0.52
CLDND1-230ENST00000514537 HBZP02008 142 aa18.32■□□□□ 0.52
CLDND1-230ENST00000514537 HSMCR30P0CW71 290 aa18.32■□□□□ 0.52
CLDND1-230ENST00000514537 RCC1P18754 421 aaPredicted RBP18.32■□□□□ 0.52
CLDND1-230ENST00000514537 HSPA13P48723 471 aa18.32■□□□□ 0.52
CLDND1-230ENST00000514537 EBI3Q14213 229 aa18.32■□□□□ 0.52
CLDND1-230ENST00000514537 HES1Q14469 280 aa18.32■□□□□ 0.52
CLDND1-230ENST00000514537 OR10K2Q6IF99 312 aa18.32■□□□□ 0.52
CLDND1-230ENST00000514537 TRAT1Q6PIZ9 186 aa18.32■□□□□ 0.52
CLDND1-230ENST00000514537 IZUMO2Q6UXV1 221 aa18.32■□□□□ 0.52
CLDND1-230ENST00000514537 TMEM91Q6ZNR0 172 aa18.32■□□□□ 0.52
CLDND1-230ENST00000514537 PRSS48Q7RTY5 328 aa18.32■□□□□ 0.52
CLDND1-230ENST00000514537 ZNF439Q8NDP4 499 aa18.32■□□□□ 0.52
CLDND1-230ENST00000514537 OR1L1Q8NH94 360 aa18.32■□□□□ 0.52
CLDND1-230ENST00000514537 ST6GALNAC6Q969X2 333 aa18.32■□□□□ 0.52
CLDND1-230ENST00000514537 MBNL3Q9NUK0 354 aaKnown RBP18.32■□□□□ 0.52
CLDND1-230ENST00000514537 IGHV1-3A0A0C4DH29 117 aa18.31■□□□□ 0.52
CLDND1-230ENST00000514537 SLC22A1O15245 554 aa18.31■□□□□ 0.52
CLDND1-230ENST00000514537 IGKV1D-33P01593 117 aa18.31■□□□□ 0.52
CLDND1-230ENST00000514537 IGKV1-33P01594 117 aa18.31■□□□□ 0.52
CLDND1-230ENST00000514537 TMEM11P17152 192 aa18.31■□□□□ 0.52
CLDND1-230ENST00000514537 HTR2CP28335 458 aa18.31■□□□□ 0.52
CLDND1-230ENST00000514537 RPS27AP62979 156 aaKnown RBP18.31■□□□□ 0.52
CLDND1-230ENST00000514537 MLLT11Q13015 90 aaPredicted RBP18.31■□□□□ 0.52
CLDND1-230ENST00000514537 MOB3BQ86TA1 216 aa18.31■□□□□ 0.52
CLDND1-230ENST00000514537 SLC31A2O15432 143 aa18.3■□□□□ 0.52
CLDND1-230ENST00000514537 CPEP16870 476 aa18.3■□□□□ 0.52
CLDND1-230ENST00000514537 CHATP28329 748 aa18.3■□□□□ 0.52
CLDND1-230ENST00000514537 REG1BP48304 166 aa18.3■□□□□ 0.52
CLDND1-230ENST00000514537 ZNF134P52741 427 aa18.3■□□□□ 0.52
CLDND1-230ENST00000514537 RPS25P62851 125 aaKnown RBP18.3■□□□□ 0.52
CLDND1-230ENST00000514537 HNF4GQ14541 408 aa18.3■□□□□ 0.52
CLDND1-230ENST00000514537 TRAM1Q15629 374 aa18.3■□□□□ 0.52
CLDND1-230ENST00000514537 TCTEX1D4Q5JR98 221 aa18.3■□□□□ 0.52
CLDND1-230ENST00000514537 C9orf152Q5JTZ5 239 aa18.3■□□□□ 0.52
CLDND1-230ENST00000514537 SLC25A48Q6ZT89 311 aaKnown RBP18.3■□□□□ 0.52
CLDND1-230ENST00000514537 C1QL4Q86Z23 238 aa18.3■□□□□ 0.52
CLDND1-230ENST00000514537 PRR18Q8N4B5 295 aa18.3■□□□□ 0.52
CLDND1-230ENST00000514537 C5orf56Q8N8D9 126 aa18.3■□□□□ 0.52
CLDND1-230ENST00000514537 OR4F17Q8NGA8 305 aa18.3■□□□□ 0.52
CLDND1-230ENST00000514537 KCNG3Q8TAE7 436 aa18.3■□□□□ 0.52
CLDND1-230ENST00000514537 MRPL30Q8TCC3 161 aaKnown RBP18.3■□□□□ 0.52
CLDND1-230ENST00000514537 OR4F4Q96R69 305 aa18.3■□□□□ 0.52
CLDND1-230ENST00000514537 TM2D1Q9BX74 207 aa18.3■□□□□ 0.52
CLDND1-230ENST00000514537 CCDC90BQ9GZT6 254 aa18.3■□□□□ 0.52
CLDND1-230ENST00000514537 TAF9BQ9HBM6 251 aa18.3■□□□□ 0.52
CLDND1-230ENST00000514537 GNG12Q9UBI6 72 aa18.3■□□□□ 0.52
CLDND1-230ENST00000514537 NOTCH3Q9UM47 2321 aa18.3■□□□□ 0.52
CLDND1-230ENST00000514537 FGF16O43320 207 aa18.29■□□□□ 0.52
CLDND1-230ENST00000514537 IL3RAP26951 378 aa18.29■□□□□ 0.52
CLDND1-230ENST00000514537 QRFPP83859 136 aa18.29■□□□□ 0.52
CLDND1-230ENST00000514537 UNC119Q13432 240 aa18.29■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms