RNA–Protein interactions for RNA: ENST00000514469.1

HMGXB3-205, Transcript of HMG-box containing 3, humanhuman

TSL 5

Gene HMGXB3, Length 975 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-205ENST00000514469 CRTAPO75718 401 aaPredicted RBP8.29□□□□□ -1.08
HMGXB3-205ENST00000514469 IGKV1D-33P01593 117 aa8.29□□□□□ -1.08
HMGXB3-205ENST00000514469 IGKV1-33P01594 117 aa8.29□□□□□ -1.08
HMGXB3-205ENST00000514469 GAPDHP04406 335 aaKnown RBP8.29□□□□□ -1.08
HMGXB3-205ENST00000514469 GLAP06280 429 aa8.29□□□□□ -1.08
HMGXB3-205ENST00000514469 IGHV3-43DP0DP04 118 aa8.29□□□□□ -1.08
HMGXB3-205ENST00000514469 GP2P55259 537 aaKnown RBP8.29□□□□□ -1.08
HMGXB3-205ENST00000514469 HES1Q14469 280 aa8.29□□□□□ -1.08
HMGXB3-205ENST00000514469 INSL4Q14641 139 aa8.29□□□□□ -1.08
HMGXB3-205ENST00000514469 OXLD1Q5BKU9 147 aa8.29□□□□□ -1.08
HMGXB3-205ENST00000514469 C9orf152Q5JTZ5 239 aa8.29□□□□□ -1.08
HMGXB3-205ENST00000514469 C6orf183Q5T699 404 aa8.29□□□□□ -1.08
HMGXB3-205ENST00000514469 SYT6Q5T7P8 510 aaPredicted RBP8.29□□□□□ -1.08
HMGXB3-205ENST00000514469 SIGIRRQ6IA17 410 aa8.29□□□□□ -1.08
HMGXB3-205ENST00000514469 FAM53AQ6NSI3 398 aaPredicted RBP8.29□□□□□ -1.08
HMGXB3-205ENST00000514469 UNQ9370/PRO34162Q6UXP9 181 aa8.29□□□□□ -1.08
HMGXB3-205ENST00000514469 Q8N6K4 173 aa8.29□□□□□ -1.08
HMGXB3-205ENST00000514469 ST6GALNAC6Q969X2 333 aa8.29□□□□□ -1.08
HMGXB3-205ENST00000514469 SELENOIQ9C0D9 397 aa8.29□□□□□ -1.08
HMGXB3-205ENST00000514469 BANF2Q9H503 90 aa8.29□□□□□ -1.08
HMGXB3-205ENST00000514469 GHRLQ9UBU3 117 aa8.29□□□□□ -1.08
HMGXB3-205ENST00000514469 NKX1-2Q9UD57 310 aaPredicted RBP8.29□□□□□ -1.08
HMGXB3-205ENST00000514469 SLC31A2O15432 143 aa8.28□□□□□ -1.08
HMGXB3-205ENST00000514469 SPINT2O43291 252 aa8.28□□□□□ -1.08
HMGXB3-205ENST00000514469 PDCD6O75340 191 aa8.28□□□□□ -1.08
HMGXB3-205ENST00000514469 CA11O75493 328 aa8.28□□□□□ -1.08
HMGXB3-205ENST00000514469 PF4V1P10720 104 aa8.28□□□□□ -1.08
HMGXB3-205ENST00000514469 FUT3P21217 361 aa8.28□□□□□ -1.08
HMGXB3-205ENST00000514469 IL3RAP26951 378 aa8.28□□□□□ -1.08
HMGXB3-205ENST00000514469 REG1BP48304 166 aa8.28□□□□□ -1.08
HMGXB3-205ENST00000514469 ZNF137PP52743 207 aa8.28□□□□□ -1.08
HMGXB3-205ENST00000514469 GABPB1Q06547 395 aaPredicted RBP8.28□□□□□ -1.08
HMGXB3-205ENST00000514469 GPR50Q13585 617 aa8.28□□□□□ -1.08
HMGXB3-205ENST00000514469 C6orf141Q5SZD1 244 aa8.28□□□□□ -1.08
HMGXB3-205ENST00000514469 FAM27D1Q5T7N8 215 aa8.28□□□□□ -1.08
HMGXB3-205ENST00000514469 TRAT1Q6PIZ9 186 aa8.28□□□□□ -1.08
HMGXB3-205ENST00000514469 SLC25A48Q6ZT89 311 aaKnown RBP8.28□□□□□ -1.08
HMGXB3-205ENST00000514469 REC114Q7Z4M0 266 aa8.28□□□□□ -1.08
HMGXB3-205ENST00000514469 LRRTM1Q86UE6 522 aa8.28□□□□□ -1.08
HMGXB3-205ENST00000514469 MS4A15Q8N5U1 240 aa8.28□□□□□ -1.08
HMGXB3-205ENST00000514469 WFDC9Q8NEX5 89 aa8.28□□□□□ -1.08
HMGXB3-205ENST00000514469 OR4K15Q8NH41 348 aa8.28□□□□□ -1.08
HMGXB3-205ENST00000514469 RTN4IP1Q8WWV3 396 aaPredicted RBP8.28□□□□□ -1.08
HMGXB3-205ENST00000514469 PHYHIPQ92561 330 aa8.28□□□□□ -1.08
HMGXB3-205ENST00000514469 PHF21AQ96BD5 680 aa8.28□□□□□ -1.08
HMGXB3-205ENST00000514469 CYYR1Q96J86 154 aa8.28□□□□□ -1.08
HMGXB3-205ENST00000514469 CST11Q9H112 138 aa8.28□□□□□ -1.08
HMGXB3-205ENST00000514469 RAB9BQ9NP90 201 aa8.28□□□□□ -1.08
HMGXB3-205ENST00000514469 MBNL3Q9NUK0 354 aaKnown RBP8.28□□□□□ -1.08
HMGXB3-205ENST00000514469 TRAPPC2LQ9UL33 140 aa8.28□□□□□ -1.08
HMGXB3-205ENST00000514469 PEX16Q9Y5Y5 336 aa8.28□□□□□ -1.08
HMGXB3-205ENST00000514469 PSMB11A5LHX3 300 aa8.27□□□□□ -1.09
HMGXB3-205ENST00000514469 TXNL1O43396 289 aa8.27□□□□□ -1.09
HMGXB3-205ENST00000514469 IGHG2P01859 326 aa8.27□□□□□ -1.09
HMGXB3-205ENST00000514469 HBZP02008 142 aa8.27□□□□□ -1.09
HMGXB3-205ENST00000514469 PRB2P02812 416 aaPredicted RBP8.27□□□□□ -1.09
HMGXB3-205ENST00000514469 UBBP0CG47 229 aa8.27□□□□□ -1.09
HMGXB3-205ENST00000514469 RCC1P18754 421 aaPredicted RBP8.27□□□□□ -1.09
HMGXB3-205ENST00000514469 CD33P20138 364 aa8.27□□□□□ -1.09
HMGXB3-205ENST00000514469 CD1BP29016 333 aa8.27□□□□□ -1.09
HMGXB3-205ENST00000514469 VHLP40337 213 aa8.27□□□□□ -1.09
HMGXB3-205ENST00000514469 ZNF134P52741 427 aa8.27□□□□□ -1.09
HMGXB3-205ENST00000514469 AQP4P55087 323 aa8.27□□□□□ -1.09
HMGXB3-205ENST00000514469 SLC35A2P78381 396 aa8.27□□□□□ -1.09
HMGXB3-205ENST00000514469 HNF4GQ14541 408 aa8.27□□□□□ -1.09
HMGXB3-205ENST00000514469 IRF3Q14653 427 aa8.27□□□□□ -1.09
HMGXB3-205ENST00000514469 ACSM3Q53FZ2 586 aa8.27□□□□□ -1.09
HMGXB3-205ENST00000514469 C1orf100Q5SVJ3 147 aa8.27□□□□□ -1.09
HMGXB3-205ENST00000514469 Q6ZPA2 131 aa8.27□□□□□ -1.09
HMGXB3-205ENST00000514469 MOB3BQ86TA1 216 aa8.27□□□□□ -1.09
HMGXB3-205ENST00000514469 ZNF554Q86TJ5 538 aa8.27□□□□□ -1.09
HMGXB3-205ENST00000514469 TGIF2LXQ8IUE1 241 aa8.27□□□□□ -1.09
HMGXB3-205ENST00000514469 OR10V1Q8NGI7 309 aa8.27□□□□□ -1.09
HMGXB3-205ENST00000514469 OR1L1Q8NH94 360 aa8.27□□□□□ -1.09
HMGXB3-205ENST00000514469 MRPL30Q8TCC3 161 aaKnown RBP8.27□□□□□ -1.09
HMGXB3-205ENST00000514469 CHPT1Q8WUD6 406 aa8.27□□□□□ -1.09
HMGXB3-205ENST00000514469 NRG4Q8WWG1 115 aa8.27□□□□□ -1.09
HMGXB3-205ENST00000514469 SGCDQ92629 289 aa8.27□□□□□ -1.09
HMGXB3-205ENST00000514469 FAM46BQ96A09 425 aa8.27□□□□□ -1.09
HMGXB3-205ENST00000514469 EAF1Q96JC9 268 aaPredicted RBP8.27□□□□□ -1.09
HMGXB3-205ENST00000514469 NOL4LQ96MY1 436 aaPredicted RBP8.27□□□□□ -1.09
HMGXB3-205ENST00000514469 TMED9Q9BVK6 235 aa8.27□□□□□ -1.09
HMGXB3-205ENST00000514469 NECAP2Q9NVZ3 263 aa8.27□□□□□ -1.09
HMGXB3-205ENST00000514469 GNG12Q9UBI6 72 aa8.27□□□□□ -1.09
HMGXB3-205ENST00000514469 IGHV3-72A0A0B4J1Y9 119 aa8.26□□□□□ -1.09
HMGXB3-205ENST00000514469 UBE2QL1A1L167 161 aa8.26□□□□□ -1.09
HMGXB3-205ENST00000514469 SERPINE3A8MV23 424 aa8.26□□□□□ -1.09
HMGXB3-205ENST00000514469 PTGES3LE9PB15 166 aa8.26□□□□□ -1.09
HMGXB3-205ENST00000514469 H0YHG0 523 aa8.26□□□□□ -1.09
HMGXB3-205ENST00000514469 MPIG6BO95866 241 aa8.26□□□□□ -1.09
HMGXB3-205ENST00000514469 PF4P02776 101 aa8.26□□□□□ -1.09
HMGXB3-205ENST00000514469 UCHL1P09936 223 aa8.26□□□□□ -1.09
HMGXB3-205ENST00000514469 VSIG8P0DPA2 414 aa8.26□□□□□ -1.09
HMGXB3-205ENST00000514469 CD37P11049 281 aa8.26□□□□□ -1.09
HMGXB3-205ENST00000514469 IGLL1P15814 213 aa8.26□□□□□ -1.09
HMGXB3-205ENST00000514469 CHATP28329 748 aa8.26□□□□□ -1.09
HMGXB3-205ENST00000514469 RPS27AP62979 156 aaKnown RBP8.26□□□□□ -1.09
HMGXB3-205ENST00000514469 SPHARQ15513 63 aa8.26□□□□□ -1.09
HMGXB3-205ENST00000514469 CT45A1Q5HYN5 189 aa8.26□□□□□ -1.09
HMGXB3-205ENST00000514469 KHDC1LQ5JSQ8 128 aa8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 84 ms