RNA–Protein interactions for RNA: ENST00000514344.5

CHD1-211, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 5

Gene CHD1, Length 2,955 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-211ENST00000514344 WHAMMP3Q1A5X7 153 aa2.36□□□□□ -2.03
CHD1-211ENST00000514344 LCN1P1Q5VSP4 162 aa2.36□□□□□ -2.03
CHD1-211ENST00000514344 BTNL8Q6UX41 500 aa2.36□□□□□ -2.03
CHD1-211ENST00000514344 TRPM8Q7Z2W7 1104 aa2.36□□□□□ -2.03
CHD1-211ENST00000514344 PRR18Q8N4B5 295 aa2.36□□□□□ -2.03
CHD1-211ENST00000514344 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP2.36□□□□□ -2.03
CHD1-211ENST00000514344 INTS14Q96SY0 518 aa2.36□□□□□ -2.03
CHD1-211ENST00000514344 PKIBQ9C010 78 aa2.36□□□□□ -2.03
CHD1-211ENST00000514344 SPAG4Q9NPE6 437 aa2.36□□□□□ -2.03
CHD1-211ENST00000514344 KIR2DL5BA0A0G2JN68 375 aa2.35□□□□□ -2.03
CHD1-211ENST00000514344 KIR2DL5BA0A0G2JPC4 375 aa2.35□□□□□ -2.03
CHD1-211ENST00000514344 TRBV2A0A0J9YWF9 115 aa2.35□□□□□ -2.03
CHD1-211ENST00000514344 S1PR2O95136 353 aa2.35□□□□□ -2.03
CHD1-211ENST00000514344 IFNA14P01570 189 aa2.35□□□□□ -2.03
CHD1-211ENST00000514344 AMBPP02760 352 aa2.35□□□□□ -2.03
CHD1-211ENST00000514344 CGB3P0DN86 165 aa2.35□□□□□ -2.03
CHD1-211ENST00000514344 CGB7P0DN87 165 aa2.35□□□□□ -2.03
CHD1-211ENST00000514344 SPI1P17947 270 aa2.35□□□□□ -2.03
CHD1-211ENST00000514344 CBLN1P23435 193 aa2.35□□□□□ -2.03
CHD1-211ENST00000514344 GSSP48637 474 aa2.35□□□□□ -2.03
CHD1-211ENST00000514344 SELENOWP63302 87 aa2.35□□□□□ -2.03
CHD1-211ENST00000514344 ZNF124Q15973 351 aa2.35□□□□□ -2.03
CHD1-211ENST00000514344 ANKRD55Q3KP44 614 aa2.35□□□□□ -2.03
CHD1-211ENST00000514344 AKIRIN2Q53H80 203 aa2.35□□□□□ -2.03
CHD1-211ENST00000514344 ZNF57Q68EA5 555 aaPredicted RBP2.35□□□□□ -2.03
CHD1-211ENST00000514344 SLC16A12Q6ZSM3 486 aa2.35□□□□□ -2.03
CHD1-211ENST00000514344 APRG1Q8IVJ8 170 aa2.35□□□□□ -2.03
CHD1-211ENST00000514344 KIR2DL5AQ8N109 375 aa2.35□□□□□ -2.03
CHD1-211ENST00000514344 C6orf223Q8N319 242 aa2.35□□□□□ -2.03
CHD1-211ENST00000514344 POC5Q8NA72 575 aa2.35□□□□□ -2.03
CHD1-211ENST00000514344 BVESQ8NE79 360 aa2.35□□□□□ -2.03
CHD1-211ENST00000514344 OR1L6Q8NGR2 347 aa2.35□□□□□ -2.03
CHD1-211ENST00000514344 KIR2DL5BQ8NHK3 375 aa2.35□□□□□ -2.03
CHD1-211ENST00000514344 SNAPC3Q92966 411 aa2.35□□□□□ -2.03
CHD1-211ENST00000514344 SRSF8Q9BRL6 282 aaKnown RBP2.35□□□□□ -2.03
CHD1-211ENST00000514344 TXLNGYQ9BZA5 131 aa2.35□□□□□ -2.03
CHD1-211ENST00000514344 CST11Q9H112 138 aa2.35□□□□□ -2.03
CHD1-211ENST00000514344 KRT84Q9NSB2 600 aa2.35□□□□□ -2.03
CHD1-211ENST00000514344 MLXQ9UH92 298 aa2.35□□□□□ -2.03
CHD1-211ENST00000514344 DHDHQ9UQ10 334 aa2.35□□□□□ -2.03
CHD1-211ENST00000514344 A0A0G2JND7 137 aa2.35□□□□□ -2.03
CHD1-211ENST00000514344 A0A0U1RQV5 110 aa2.35□□□□□ -2.03
CHD1-211ENST00000514344 ZNF320A2RRD8 509 aa2.35□□□□□ -2.03
CHD1-211ENST00000514344 KRTAP29-1A8MX34 341 aaPredicted RBP2.35□□□□□ -2.03
CHD1-211ENST00000514344 SLC33A1O00400 549 aaPredicted RBP2.35□□□□□ -2.03
CHD1-211ENST00000514344 SDCBPO00560 298 aaPredicted RBP2.35□□□□□ -2.03
CHD1-211ENST00000514344 AIREO43918 545 aa2.35□□□□□ -2.03
CHD1-211ENST00000514344 SELENOFO60613 162 aa2.35□□□□□ -2.03
CHD1-211ENST00000514344 MRPL3P09001 348 aaKnown RBP2.35□□□□□ -2.03
CHD1-211ENST00000514344 IL3RAP26951 378 aa2.35□□□□□ -2.03
CHD1-211ENST00000514344 KDELR2P33947 212 aa2.35□□□□□ -2.03
CHD1-211ENST00000514344 VHLP40337 213 aa2.35□□□□□ -2.03
CHD1-211ENST00000514344 RPS7P62081 194 aaKnown RBP2.35□□□□□ -2.03
CHD1-211ENST00000514344 VSNL1P62760 191 aa2.35□□□□□ -2.03
CHD1-211ENST00000514344 UBE2V2Q15819 145 aa2.35□□□□□ -2.03
CHD1-211ENST00000514344 TEX30Q5JUR7 227 aa2.35□□□□□ -2.03
CHD1-211ENST00000514344 SPIN3Q5JUX0 258 aa2.35□□□□□ -2.03
CHD1-211ENST00000514344 CD200R1LQ6Q8B3 271 aa2.35□□□□□ -2.03
CHD1-211ENST00000514344 RBPMS2Q6ZRY4 209 aaKnown RBP2.35□□□□□ -2.03
CHD1-211ENST00000514344 CYP4Z1Q86W10 505 aa2.35□□□□□ -2.03
CHD1-211ENST00000514344 ENTHD1Q8IYW4 607 aa2.35□□□□□ -2.03
CHD1-211ENST00000514344 SLC37A3Q8NCC5 494 aa2.35□□□□□ -2.03
CHD1-211ENST00000514344 KCNG3Q8TAE7 436 aa2.35□□□□□ -2.03
CHD1-211ENST00000514344 NR1H4Q96RI1 486 aaPredicted RBP2.35□□□□□ -2.03
CHD1-211ENST00000514344 PBOV1Q9GZY1 135 aa2.35□□□□□ -2.03
CHD1-211ENST00000514344 KLHDC2Q9Y2U9 406 aa2.35□□□□□ -2.03
CHD1-211ENST00000514344 FAM32AQ9Y421 112 aaKnown RBP2.35□□□□□ -2.03
CHD1-211ENST00000514344 MPTX1A8MV57 137 aa2.34□□□□□ -2.03
CHD1-211ENST00000514344 NPIPB11E5RHQ5 1161 aa2.34□□□□□ -2.03
CHD1-211ENST00000514344 PPP5D1E7EU14 171 aa2.34□□□□□ -2.03
CHD1-211ENST00000514344 GSTA4O15217 222 aa2.34□□□□□ -2.03
CHD1-211ENST00000514344 BIRC5O15392 142 aa2.34□□□□□ -2.03
CHD1-211ENST00000514344 CYB5AP00167 134 aa2.34□□□□□ -2.03
CHD1-211ENST00000514344 CSN2P05814 226 aa2.34□□□□□ -2.03
CHD1-211ENST00000514344 H1F0P07305 194 aaKnown RBP2.34□□□□□ -2.03
CHD1-211ENST00000514344 OCM2P0CE71 109 aa2.34□□□□□ -2.03
CHD1-211ENST00000514344 OCMP0CE72 109 aaPredicted RBP2.34□□□□□ -2.03
CHD1-211ENST00000514344 GZMMP51124 257 aa2.34□□□□□ -2.03
CHD1-211ENST00000514344 ZNF134P52741 427 aa2.34□□□□□ -2.03
CHD1-211ENST00000514344 KLF10Q13118 480 aa2.34□□□□□ -2.03
CHD1-211ENST00000514344 MOGAT2Q3SYC2 334 aa2.34□□□□□ -2.03
CHD1-211ENST00000514344 TMEM42Q69YG0 159 aa2.34□□□□□ -2.03
CHD1-211ENST00000514344 ZNF343Q6P1L6 599 aa2.34□□□□□ -2.03
CHD1-211ENST00000514344 KCTD20Q7Z5Y7 419 aa2.34□□□□□ -2.03
CHD1-211ENST00000514344 Q8IYB0 196 aa2.34□□□□□ -2.03
CHD1-211ENST00000514344 EIF1ADQ8N9N8 165 aaKnown RBP2.34□□□□□ -2.03
CHD1-211ENST00000514344 UXS1Q8NBZ7 420 aa2.34□□□□□ -2.03
CHD1-211ENST00000514344 OR10V1Q8NGI7 309 aa2.34□□□□□ -2.03
CHD1-211ENST00000514344 OR51T1Q8NGJ9 327 aa2.34□□□□□ -2.03
CHD1-211ENST00000514344 THRSPQ92748 146 aa2.34□□□□□ -2.03
CHD1-211ENST00000514344 BORCS8Q96FH0 119 aa2.34□□□□□ -2.03
CHD1-211ENST00000514344 CSTL1Q9H114 145 aa2.34□□□□□ -2.03
CHD1-211ENST00000514344 HMG20AQ9NP66 347 aa2.34□□□□□ -2.03
CHD1-211ENST00000514344 FAM118AQ9NWS6 357 aa2.34□□□□□ -2.03
CHD1-211ENST00000514344 FAM206AQ9NX38 181 aa2.34□□□□□ -2.03
CHD1-211ENST00000514344 TECRQ9NZ01 308 aaKnown RBP2.34□□□□□ -2.03
CHD1-211ENST00000514344 PTTG2Q9NZH5 202 aa2.34□□□□□ -2.03
CHD1-211ENST00000514344 MUC2Q02817 5179 aa2.34□□□□□ -2.03
CHD1-211ENST00000514344 ELOA3CA0A087WX78 387 aaPredicted RBP2.34□□□□□ -2.03
CHD1-211ENST00000514344 IGHV4-28A0A0C4DH34 117 aa2.34□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms