RNA–Protein interactions for RNA: ENST00000513984.5

VCAN-211, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 1,825 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-211ENST00000513984 GSX2Q9BZM3 304 aa12.53□□□□□ -0.4
VCAN-211ENST00000513984 SHARPINQ9H0F6 387 aa12.53□□□□□ -0.4
VCAN-211ENST00000513984 KCNIP1Q9NZI2 227 aa12.53□□□□□ -0.4
VCAN-211ENST00000513984 TMED3Q9Y3Q3 217 aa12.53□□□□□ -0.4
VCAN-211ENST00000513984 IGKV1D-17A0A075B6S4 117 aa12.53□□□□□ -0.4
VCAN-211ENST00000513984 LINC00862A6NCI5 91 aa12.53□□□□□ -0.4
VCAN-211ENST00000513984 UCP1P25874 307 aa12.53□□□□□ -0.4
VCAN-211ENST00000513984 LUMP51884 338 aaPredicted RBP12.53□□□□□ -0.4
VCAN-211ENST00000513984 ESCO2Q56NI9 601 aa12.53□□□□□ -0.4
VCAN-211ENST00000513984 PRR18Q8N4B5 295 aa12.53□□□□□ -0.4
VCAN-211ENST00000513984 SCARB1Q8WTV0 552 aa12.53□□□□□ -0.4
VCAN-211ENST00000513984 RRNAD1Q96FB5 475 aaKnown RBP12.53□□□□□ -0.4
VCAN-211ENST00000513984 CNTNAP3BQ96NU0 1288 aa12.53□□□□□ -0.4
VCAN-211ENST00000513984 WFIKKN1Q96NZ8 548 aa12.53□□□□□ -0.4
VCAN-211ENST00000513984 CNTNAP3Q9BZ76 1288 aa12.53□□□□□ -0.4
VCAN-211ENST00000513984 DNAJB11Q9UBS4 358 aa12.53□□□□□ -0.4
VCAN-211ENST00000513984 C12orf77C9JDV5 145 aa12.52□□□□□ -0.41
VCAN-211ENST00000513984 H0Y980 276 aa12.52□□□□□ -0.41
VCAN-211ENST00000513984 HSPA12AO43301 675 aa12.52□□□□□ -0.41
VCAN-211ENST00000513984 PGLYRP1O75594 196 aaPredicted RBP12.52□□□□□ -0.41
VCAN-211ENST00000513984 ADH4P08319 380 aa12.52□□□□□ -0.41
VCAN-211ENST00000513984 TNFSF4P23510 183 aa12.52□□□□□ -0.41
VCAN-211ENST00000513984 S100GP29377 79 aa12.52□□□□□ -0.41
VCAN-211ENST00000513984 S100A10P60903 97 aa12.52□□□□□ -0.41
VCAN-211ENST00000513984 TNFAIP6P98066 277 aaPredicted RBP12.52□□□□□ -0.41
VCAN-211ENST00000513984 ADIPOQQ15848 244 aa12.52□□□□□ -0.41
VCAN-211ENST00000513984 BEX5Q5H9J7 111 aa12.52□□□□□ -0.41
VCAN-211ENST00000513984 KRBOX4Q5JUW0 171 aa12.52□□□□□ -0.41
VCAN-211ENST00000513984 C6orf183Q5T699 404 aa12.52□□□□□ -0.41
VCAN-211ENST00000513984 MEX3BQ6ZN04 569 aaKnown RBP12.52□□□□□ -0.41
VCAN-211ENST00000513984 SLC35G3Q8N808 338 aa12.52□□□□□ -0.41
VCAN-211ENST00000513984 OR1S1Q8NH92 325 aa12.52□□□□□ -0.41
VCAN-211ENST00000513984 ST8SIA2Q92186 375 aa12.52□□□□□ -0.41
VCAN-211ENST00000513984 ERGIC1Q969X5 290 aa12.52□□□□□ -0.41
VCAN-211ENST00000513984 AQP10Q96PS8 301 aa12.52□□□□□ -0.41
VCAN-211ENST00000513984 TOLLIPQ9H0E2 274 aa12.52□□□□□ -0.41
VCAN-211ENST00000513984 NGBQ9NPG2 151 aa12.52□□□□□ -0.41
VCAN-211ENST00000513984 UBE2J1Q9Y385 318 aaPredicted RBP12.52□□□□□ -0.41
VCAN-211ENST00000513984 DUXBA0A1W2PPF3 345 aa12.51□□□□□ -0.41
VCAN-211ENST00000513984 SPDEFO95238 335 aa12.51□□□□□ -0.41
VCAN-211ENST00000513984 CDS2O95674 445 aa12.51□□□□□ -0.41
VCAN-211ENST00000513984 IGLV2-14P01704 120 aa12.51□□□□□ -0.41
VCAN-211ENST00000513984 GABRA2P47869 451 aa12.51□□□□□ -0.41
VCAN-211ENST00000513984 ID4P47928 161 aa12.51□□□□□ -0.41
VCAN-211ENST00000513984 RAB14P61106 215 aa12.51□□□□□ -0.41
VCAN-211ENST00000513984 FBXL19-AS1Q494R0 122 aa12.51□□□□□ -0.41
VCAN-211ENST00000513984 TMEM268Q5VZI3 342 aa12.51□□□□□ -0.41
VCAN-211ENST00000513984 ALKAL2Q6UX46 152 aa12.51□□□□□ -0.41
VCAN-211ENST00000513984 KDF1Q8NAX2 398 aaPredicted RBP12.51□□□□□ -0.41
VCAN-211ENST00000513984 Q8TCH9 128 aa12.51□□□□□ -0.41
VCAN-211ENST00000513984 FAM222BQ8WU58 562 aa12.51□□□□□ -0.41
VCAN-211ENST00000513984 GALMQ96C23 342 aa12.51□□□□□ -0.41
VCAN-211ENST00000513984 AKR1E2Q96JD6 320 aa12.51□□□□□ -0.41
VCAN-211ENST00000513984 LURAP1Q96LR2 239 aa12.51□□□□□ -0.41
VCAN-211ENST00000513984 ARPC5LQ9BPX5 153 aa12.51□□□□□ -0.41
VCAN-211ENST00000513984 DNTTIP1Q9H147 329 aa12.51□□□□□ -0.41
VCAN-211ENST00000513984 GCM1Q9NP62 436 aa12.51□□□□□ -0.41
VCAN-211ENST00000513984 AUP1Q9Y679 476 aa12.51□□□□□ -0.41
VCAN-211ENST00000513984 DEDDO75618 318 aa12.51□□□□□ -0.41
VCAN-211ENST00000513984 F2RP25116 425 aa12.51□□□□□ -0.41
VCAN-211ENST00000513984 GLIPR1P48060 266 aa12.51□□□□□ -0.41
VCAN-211ENST00000513984 TRAT1Q6PIZ9 186 aa12.51□□□□□ -0.41
VCAN-211ENST00000513984 UNQ6494/PRO21346Q6UXR6 183 aa12.51□□□□□ -0.41
VCAN-211ENST00000513984 FAM219AQ8IW50 185 aa12.51□□□□□ -0.41
VCAN-211ENST00000513984 SELENOHQ8IZQ5 122 aaKnown RBP12.51□□□□□ -0.41
VCAN-211ENST00000513984 OR5D13Q8NGL4 314 aa12.51□□□□□ -0.41
VCAN-211ENST00000513984 OR1L1Q8NH94 360 aa12.51□□□□□ -0.41
VCAN-211ENST00000513984 UBALD1Q8TB05 177 aa12.51□□□□□ -0.41
VCAN-211ENST00000513984 ZCCHC14Q8WYQ9 949 aaKnown RBP12.51□□□□□ -0.41
VCAN-211ENST00000513984 IL22RA2Q969J5 263 aa12.51□□□□□ -0.41
VCAN-211ENST00000513984 SNX22Q96L94 193 aa12.51□□□□□ -0.41
VCAN-211ENST00000513984 DIRC2Q96SL1 478 aa12.51□□□□□ -0.41
VCAN-211ENST00000513984 PRORYQ9H606 182 aa12.51□□□□□ -0.41
VCAN-211ENST00000513984 RNF7Q9UBF6 113 aa12.51□□□□□ -0.41
VCAN-211ENST00000513984 PIEZO1Q92508 2521 aa12.5□□□□□ -0.41
VCAN-211ENST00000513984 MSGN1A6NI15 193 aa12.5□□□□□ -0.41
VCAN-211ENST00000513984 KCNAB3O43448 404 aa12.5□□□□□ -0.41
VCAN-211ENST00000513984 HBZP02008 142 aa12.5□□□□□ -0.41
VCAN-211ENST00000513984 RLN2P04090 185 aa12.5□□□□□ -0.41
VCAN-211ENST00000513984 CD55P08174 381 aa12.5□□□□□ -0.41
VCAN-211ENST00000513984 OR4A8P0C604 315 aa12.5□□□□□ -0.41
VCAN-211ENST00000513984 NUP62P37198 522 aaPredicted RBP12.5□□□□□ -0.41
VCAN-211ENST00000513984 CEACAM6P40199 344 aa12.5□□□□□ -0.41
VCAN-211ENST00000513984 ZNF695Q8IW36 515 aa12.5□□□□□ -0.41
VCAN-211ENST00000513984 BOLLQ8N9W6 283 aaKnown RBP12.5□□□□□ -0.41
VCAN-211ENST00000513984 PPP1R35Q8TAP8 253 aa12.5□□□□□ -0.41
VCAN-211ENST00000513984 GPHA2Q96T91 129 aa12.5□□□□□ -0.41
VCAN-211ENST00000513984 PARP12Q9H0J9 701 aaKnown RBP12.5□□□□□ -0.41
VCAN-211ENST00000513984 IGHV3OR15-7A0A075B7D8 119 aa12.49□□□□□ -0.41
VCAN-211ENST00000513984 MGST3O14880 152 aa12.49□□□□□ -0.41
VCAN-211ENST00000513984 ATXN7O15265 892 aaPredicted RBP12.49□□□□□ -0.41
VCAN-211ENST00000513984 MBPP02686 304 aaPredicted RBP12.49□□□□□ -0.41
VCAN-211ENST00000513984 CHRNB4P30926 498 aa12.49□□□□□ -0.41
VCAN-211ENST00000513984 IL2RGP31785 369 aa12.49□□□□□ -0.41
VCAN-211ENST00000513984 SMCO1Q147U7 214 aa12.49□□□□□ -0.41
VCAN-211ENST00000513984 NCMAPQ5T1S8 102 aa12.49□□□□□ -0.41
VCAN-211ENST00000513984 ADAM5Q6NVV9 412 aa12.49□□□□□ -0.41
VCAN-211ENST00000513984 OR13A1Q8NGR1 328 aa12.49□□□□□ -0.41
VCAN-211ENST00000513984 ANGPTL6Q8NI99 470 aa12.49□□□□□ -0.41
VCAN-211ENST00000513984 MRGPRDQ8TDS7 321 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms