RNA–Protein interactions for RNA: ENST00000513960.5

VCAN-210, Transcript of versican, humanhuman

TSL 1 (best)

Gene VCAN, Length 3,973 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-210ENST00000513960 ZNF92Q03936 586 aa8.31□□□□□ -1.08
VCAN-210ENST00000513960 HERPUD1Q15011 391 aa8.31□□□□□ -1.08
VCAN-210ENST00000513960 KCNMB1Q16558 191 aa8.31□□□□□ -1.08
VCAN-210ENST00000513960 PP6455Q8WZ26 134 aa8.31□□□□□ -1.08
VCAN-210ENST00000513960 ARV1Q9H2C2 271 aa8.31□□□□□ -1.08
VCAN-210ENST00000513960 LYRM2Q9NU23 88 aaPredicted RBP8.31□□□□□ -1.08
VCAN-210ENST00000513960 A0A1B0GU03 582 aa8.3□□□□□ -1.08
VCAN-210ENST00000513960 A0A1B0GUS0 222 aa8.3□□□□□ -1.08
VCAN-210ENST00000513960 LOC102725191A0A1B0GVB3 256 aa8.3□□□□□ -1.08
VCAN-210ENST00000513960 ZNF17P17021 662 aa8.3□□□□□ -1.08
VCAN-210ENST00000513960 TAS2R30P59541 319 aa8.3□□□□□ -1.08
VCAN-210ENST00000513960 SNAI3Q3KNW1 292 aa8.3□□□□□ -1.08
VCAN-210ENST00000513960 C9orf135Q5VTT2 229 aa8.3□□□□□ -1.08
VCAN-210ENST00000513960 DMRTA1Q5VZB9 504 aa8.3□□□□□ -1.08
VCAN-210ENST00000513960 WDR5BQ86VZ2 330 aa8.3□□□□□ -1.08
VCAN-210ENST00000513960 DTD1Q8TEA8 209 aa8.3□□□□□ -1.08
VCAN-210ENST00000513960 LYZL4Q96KX0 146 aa8.3□□□□□ -1.08
VCAN-210ENST00000513960 Q96M66 194 aa8.3□□□□□ -1.08
VCAN-210ENST00000513960 Q9N2K0 584 aa8.3□□□□□ -1.08
VCAN-210ENST00000513960 TRAV34A0A0B4J273 112 aa8.3□□□□□ -1.08
VCAN-210ENST00000513960 LRRC3CA6NJW4 275 aa8.3□□□□□ -1.08
VCAN-210ENST00000513960 CLDN1O95832 211 aa8.3□□□□□ -1.08
VCAN-210ENST00000513960 EGR1P18146 543 aa8.3□□□□□ -1.08
VCAN-210ENST00000513960 PMS2CLQ68D20 193 aa8.3□□□□□ -1.08
VCAN-210ENST00000513960 C18orf12Q96KH6 178 aa8.3□□□□□ -1.08
VCAN-210ENST00000513960 PILRBQ9UKJ0 227 aa8.3□□□□□ -1.08
VCAN-210ENST00000513960 EXPH5Q8NEV8 1989 aa8.3□□□□□ -1.08
VCAN-210ENST00000513960 NRASP01111 189 aa8.3□□□□□ -1.08
VCAN-210ENST00000513960 RPLP1P05386 114 aaKnown RBP8.3□□□□□ -1.08
VCAN-210ENST00000513960 CCL3P10147 92 aa8.3□□□□□ -1.08
VCAN-210ENST00000513960 PSMB3P49720 205 aa8.3□□□□□ -1.08
VCAN-210ENST00000513960 DSCR4P56555 118 aaPredicted RBP8.3□□□□□ -1.08
VCAN-210ENST00000513960 CARD18P57730 90 aa8.3□□□□□ -1.08
VCAN-210ENST00000513960 RPS19BP1Q86WX3 136 aaKnown RBP8.3□□□□□ -1.08
VCAN-210ENST00000513960 FAM89BQ8N5H3 189 aa8.3□□□□□ -1.08
VCAN-210ENST00000513960 PSENENQ9NZ42 101 aa8.3□□□□□ -1.08
VCAN-210ENST00000513960 TRAPPC1Q9Y5R8 145 aa8.3□□□□□ -1.08
VCAN-210ENST00000513960 MYO15AQ9UKN7 3530 aa8.3□□□□□ -1.08
VCAN-210ENST00000513960 IGHV1-45A0A0A0MS14 117 aa8.29□□□□□ -1.08
VCAN-210ENST00000513960 CDS2O95674 445 aa8.29□□□□□ -1.08
VCAN-210ENST00000513960 IGHV3-9P01782 118 aa8.29□□□□□ -1.08
VCAN-210ENST00000513960 TCN2P20062 427 aa8.29□□□□□ -1.08
VCAN-210ENST00000513960 PLA2G5P39877 138 aa8.29□□□□□ -1.08
VCAN-210ENST00000513960 DUSP3P51452 185 aaPredicted RBP8.29□□□□□ -1.08
VCAN-210ENST00000513960 HIST3H3Q16695 136 aa8.29□□□□□ -1.08
VCAN-210ENST00000513960 RNF151Q2KHN1 245 aa8.29□□□□□ -1.08
VCAN-210ENST00000513960 TEX38Q6PEX7 206 aa8.29□□□□□ -1.08
VCAN-210ENST00000513960 KCNIP4Q6PIL6 250 aa8.29□□□□□ -1.08
VCAN-210ENST00000513960 OR2T10Q8NGZ9 312 aa8.29□□□□□ -1.08
VCAN-210ENST00000513960 OR51B6Q9H340 312 aa8.29□□□□□ -1.08
VCAN-210ENST00000513960 PNRC2Q9NPJ4 139 aaKnown RBP8.29□□□□□ -1.08
VCAN-210ENST00000513960 NAT8Q9UHE5 227 aa8.29□□□□□ -1.08
VCAN-210ENST00000513960 GRIFINA4D1Z8 144 aa8.29□□□□□ -1.08
VCAN-210ENST00000513960 DHHO43323 396 aa8.29□□□□□ -1.08
VCAN-210ENST00000513960 GCGP01275 180 aa8.29□□□□□ -1.08
VCAN-210ENST00000513960 OR3A1P47881 315 aa8.29□□□□□ -1.08
VCAN-210ENST00000513960 TFPI2P48307 235 aa8.29□□□□□ -1.08
VCAN-210ENST00000513960 EXTL1Q92935 676 aa8.29□□□□□ -1.08
VCAN-210ENST00000513960 ZNF385AQ96PM9 386 aaKnown RBP8.29□□□□□ -1.08
VCAN-210ENST00000513960 SRD5A3Q9H8P0 318 aa8.29□□□□□ -1.08
VCAN-210ENST00000513960 SDF2L1Q9HCN8 221 aa8.29□□□□□ -1.08
VCAN-210ENST00000513960 PPP1R3CQ9UQK1 317 aa8.29□□□□□ -1.08
VCAN-210ENST00000513960 V9GYS6 101 aa8.29□□□□□ -1.08
VCAN-210ENST00000513960 LOC102723996A0A087X1L8 192 aa8.29□□□□□ -1.08
VCAN-210ENST00000513960 TRAV39A0A0B4J263 110 aa8.29□□□□□ -1.08
VCAN-210ENST00000513960 HS3ST1O14792 307 aa8.29□□□□□ -1.08
VCAN-210ENST00000513960 DKK1O94907 266 aa8.29□□□□□ -1.08
VCAN-210ENST00000513960 NPSP0C0P6 89 aa8.29□□□□□ -1.08
VCAN-210ENST00000513960 CCL4P13236 92 aa8.29□□□□□ -1.08
VCAN-210ENST00000513960 ETFRF1Q6IPR1 90 aa8.29□□□□□ -1.08
VCAN-210ENST00000513960 ZNF774Q6NX45 483 aa8.29□□□□□ -1.08
VCAN-210ENST00000513960 CALHM1Q8IU99 346 aa8.29□□□□□ -1.08
VCAN-210ENST00000513960 RDH5Q92781 318 aa8.29□□□□□ -1.08
VCAN-210ENST00000513960 UCN2Q96RP3 112 aa8.29□□□□□ -1.08
VCAN-210ENST00000513960 ANGPTL4Q9BY76 406 aa8.29□□□□□ -1.08
VCAN-210ENST00000513960 TMEM222Q9H0R3 208 aa8.29□□□□□ -1.08
VCAN-210ENST00000513960 CACNG5Q9UF02 275 aa8.29□□□□□ -1.08
VCAN-210ENST00000513960 VAX2Q9UIW0 290 aa8.29□□□□□ -1.08
VCAN-210ENST00000513960 ADAMTS20P59510 1910 aa8.29□□□□□ -1.08
VCAN-210ENST00000513960 IGHV3-64DA0A0J9YX35 117 aa8.29□□□□□ -1.08
VCAN-210ENST00000513960 CRYAAP02489 173 aa8.29□□□□□ -1.08
VCAN-210ENST00000513960 SCTP09683 121 aa8.29□□□□□ -1.08
VCAN-210ENST00000513960 LIFP15018 202 aa8.29□□□□□ -1.08
VCAN-210ENST00000513960 CCL1P22362 96 aa8.29□□□□□ -1.08
VCAN-210ENST00000513960 FOLR3P41439 243 aa8.29□□□□□ -1.08
VCAN-210ENST00000513960 UCP2P55851 309 aa8.29□□□□□ -1.08
VCAN-210ENST00000513960 BAXQ07812 192 aa8.29□□□□□ -1.08
VCAN-210ENST00000513960 PRSS8Q16651 343 aa8.29□□□□□ -1.08
VCAN-210ENST00000513960 FAM90A2PQ658T7 463 aa8.29□□□□□ -1.08
VCAN-210ENST00000513960 MAML2Q8IZL2 1156 aaPredicted RBP8.29□□□□□ -1.08
VCAN-210ENST00000513960 ZNF709Q8N972 641 aa8.29□□□□□ -1.08
VCAN-210ENST00000513960 OR4D5Q8NGN0 318 aa8.29□□□□□ -1.08
VCAN-210ENST00000513960 MOB3AQ96BX8 217 aa8.29□□□□□ -1.08
VCAN-210ENST00000513960 NEU1Q99519 415 aa8.29□□□□□ -1.08
VCAN-210ENST00000513960 ANAPC10Q9UM13 185 aa8.29□□□□□ -1.08
VCAN-210ENST00000513960 ARHGAP21Q5T5U3 1957 aa8.28□□□□□ -1.08
VCAN-210ENST00000513960 SERPINA7P05543 415 aa8.28□□□□□ -1.08
VCAN-210ENST00000513960 COX6A1P12074 109 aa8.28□□□□□ -1.08
VCAN-210ENST00000513960 IL24Q13007 206 aa8.28□□□□□ -1.08
VCAN-210ENST00000513960 DBX2Q6ZNG2 339 aa8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms