RNA–Protein interactions for RNA: ENST00000513643.5

RNF4-221, Transcript of ring finger protein 4, humanhuman

TSL 3

Gene RNF4, Length 516 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-221ENST00000513643 CCRL2O00421 344 aa7.78□□□□□ -1.16
RNF4-221ENST00000513643 MPIG6BO95866 241 aa7.78□□□□□ -1.16
RNF4-221ENST00000513643 RCC1P18754 421 aaPredicted RBP7.78□□□□□ -1.16
RNF4-221ENST00000513643 CALRP27797 417 aaKnown RBP7.78□□□□□ -1.16
RNF4-221ENST00000513643 PSMD7P51665 324 aa7.78□□□□□ -1.16
RNF4-221ENST00000513643 ZNF137PP52743 207 aa7.78□□□□□ -1.16
RNF4-221ENST00000513643 SRSF4Q08170 494 aaKnown RBP7.78□□□□□ -1.16
RNF4-221ENST00000513643 FAM189A2Q15884 450 aa7.78□□□□□ -1.16
RNF4-221ENST00000513643 LY6EQ16553 131 aa7.78□□□□□ -1.16
RNF4-221ENST00000513643 C2orf76Q3KRA6 126 aa7.78□□□□□ -1.16
RNF4-221ENST00000513643 TMEM30BQ3MIR4 351 aa7.78□□□□□ -1.16
RNF4-221ENST00000513643 KCTD21Q4G0X4 260 aa7.78□□□□□ -1.16
RNF4-221ENST00000513643 LY6G6FQ5SQ64 297 aa7.78□□□□□ -1.16
RNF4-221ENST00000513643 STEAP3Q658P3 488 aa7.78□□□□□ -1.16
RNF4-221ENST00000513643 FAM53AQ6NSI3 398 aaPredicted RBP7.78□□□□□ -1.16
RNF4-221ENST00000513643 CFHR4Q92496 578 aa7.78□□□□□ -1.16
RNF4-221ENST00000513643 FCGR1BQ92637 280 aa7.78□□□□□ -1.16
RNF4-221ENST00000513643 ARL11Q969Q4 196 aa7.78□□□□□ -1.16
RNF4-221ENST00000513643 FAM46BQ96A09 425 aa7.78□□□□□ -1.16
RNF4-221ENST00000513643 SULT4A1Q9BR01 284 aa7.78□□□□□ -1.16
RNF4-221ENST00000513643 OCSTAMPQ9BR26 566 aa7.78□□□□□ -1.16
RNF4-221ENST00000513643 NICN1Q9BSH3 213 aa7.78□□□□□ -1.16
RNF4-221ENST00000513643 TMEM59Q9BXS4 323 aa7.78□□□□□ -1.16
RNF4-221ENST00000513643 WNT10AQ9GZT5 417 aa7.78□□□□□ -1.16
RNF4-221ENST00000513643 KCNK15Q9H427 330 aa7.78□□□□□ -1.16
RNF4-221ENST00000513643 ZNF702PQ9H963 129 aa7.78□□□□□ -1.16
RNF4-221ENST00000513643 SERTAD4Q9NUC0 356 aa7.78□□□□□ -1.16
RNF4-221ENST00000513643 ETAA1Q9NY74 926 aa7.78□□□□□ -1.16
RNF4-221ENST00000513643 PITPNC1Q9UKF7 332 aa7.78□□□□□ -1.16
RNF4-221ENST00000513643 HSF4Q9ULV5 492 aa7.78□□□□□ -1.16
RNF4-221ENST00000513643 V9GY05 133 aa7.78□□□□□ -1.16
RNF4-221ENST00000513643 A0A1W2PPI3 338 aa7.77□□□□□ -1.17
RNF4-221ENST00000513643 FAM172BPA6NC97 362 aa7.77□□□□□ -1.17
RNF4-221ENST00000513643 IFITM5A6NNB3 132 aa7.77□□□□□ -1.17
RNF4-221ENST00000513643 TOR1AO14656 332 aa7.77□□□□□ -1.17
RNF4-221ENST00000513643 AMY1AP04745 511 aa7.77□□□□□ -1.17
RNF4-221ENST00000513643 AMY2AP04746 511 aa7.77□□□□□ -1.17
RNF4-221ENST00000513643 ARSBP15848 533 aa7.77□□□□□ -1.17
RNF4-221ENST00000513643 NFYBP25208 207 aa7.77□□□□□ -1.17
RNF4-221ENST00000513643 CEACAM3P40198 252 aa7.77□□□□□ -1.17
RNF4-221ENST00000513643 ZNF134P52741 427 aa7.77□□□□□ -1.17
RNF4-221ENST00000513643 EBI3Q14213 229 aa7.77□□□□□ -1.17
RNF4-221ENST00000513643 DIAPH2-AS1Q14236 149 aa7.77□□□□□ -1.17
RNF4-221ENST00000513643 C11orf88Q6PI97 169 aa7.77□□□□□ -1.17
RNF4-221ENST00000513643 DTX3Q8N9I9 347 aa7.77□□□□□ -1.17
RNF4-221ENST00000513643 OR51D1Q8NGF3 324 aa7.77□□□□□ -1.17
RNF4-221ENST00000513643 OR4K15Q8NH41 348 aa7.77□□□□□ -1.17
RNF4-221ENST00000513643 NDNFQ8TB73 568 aa7.77□□□□□ -1.17
RNF4-221ENST00000513643 CCDC107Q8WV48 283 aa7.77□□□□□ -1.17
RNF4-221ENST00000513643 LEAP2Q969E1 77 aa7.77□□□□□ -1.17
RNF4-221ENST00000513643 FAM3DQ96BQ1 224 aa7.77□□□□□ -1.17
RNF4-221ENST00000513643 FAAP24Q9BTP7 215 aa7.77□□□□□ -1.17
RNF4-221ENST00000513643 NPFFR1Q9GZQ6 430 aa7.77□□□□□ -1.17
RNF4-221ENST00000513643 LIN7BQ9HAP6 207 aa7.77□□□□□ -1.17
RNF4-221ENST00000513643 SIGLEC9Q9Y336 463 aa7.77□□□□□ -1.17
RNF4-221ENST00000513643 UBE2QL1A1L167 161 aa7.76□□□□□ -1.17
RNF4-221ENST00000513643 TRIM64CA6NLI5 447 aa7.76□□□□□ -1.17
RNF4-221ENST00000513643 SOCS1O15524 211 aa7.76□□□□□ -1.17
RNF4-221ENST00000513643 IGHV3-7P01780 117 aa7.76□□□□□ -1.17
RNF4-221ENST00000513643 HBZP02008 142 aa7.76□□□□□ -1.17
RNF4-221ENST00000513643 OR10A3P58181 314 aa7.76□□□□□ -1.17
RNF4-221ENST00000513643 BLCAPP62952 87 aa7.76□□□□□ -1.17
RNF4-221ENST00000513643 HTD2P86397 168 aa7.76□□□□□ -1.17
RNF4-221ENST00000513643 ZNF816Q0VGE8 651 aaPredicted RBP7.76□□□□□ -1.17
RNF4-221ENST00000513643 PLA2G7Q13093 441 aa7.76□□□□□ -1.17
RNF4-221ENST00000513643 MADCAM1Q13477 382 aa7.76□□□□□ -1.17
RNF4-221ENST00000513643 P2RY14Q15391 338 aa7.76□□□□□ -1.17
RNF4-221ENST00000513643 HMGN3Q15651 99 aa7.76□□□□□ -1.17
RNF4-221ENST00000513643 RAB11BQ15907 218 aa7.76□□□□□ -1.17
RNF4-221ENST00000513643 PLA1AQ53H76 456 aa7.76□□□□□ -1.17
RNF4-221ENST00000513643 CT45A1Q5HYN5 189 aa7.76□□□□□ -1.17
RNF4-221ENST00000513643 PLAC9Q5JTB6 97 aa7.76□□□□□ -1.17
RNF4-221ENST00000513643 C6orf183Q5T699 404 aa7.76□□□□□ -1.17
RNF4-221ENST00000513643 CCDC144NLQ6NUI1 221 aa7.76□□□□□ -1.17
RNF4-221ENST00000513643 TRAT1Q6PIZ9 186 aa7.76□□□□□ -1.17
RNF4-221ENST00000513643 Q6ZS46 218 aa7.76□□□□□ -1.17
RNF4-221ENST00000513643 SLC25A48Q6ZT89 311 aaKnown RBP7.76□□□□□ -1.17
RNF4-221ENST00000513643 C16orf82Q7Z2V1 217 aa7.76□□□□□ -1.17
RNF4-221ENST00000513643 C6orf201Q7Z4U5 140 aa7.76□□□□□ -1.17
RNF4-221ENST00000513643 C5orf24Q7Z6I8 188 aa7.76□□□□□ -1.17
RNF4-221ENST00000513643 TMEM219Q86XT9 240 aa7.76□□□□□ -1.17
RNF4-221ENST00000513643 OR1L1Q8NH94 360 aa7.76□□□□□ -1.17
RNF4-221ENST00000513643 CT45A3Q8NHU0 189 aa7.76□□□□□ -1.17
RNF4-221ENST00000513643 PTX4Q96A99 478 aa7.76□□□□□ -1.17
RNF4-221ENST00000513643 RBM14Q96PK6 669 aaKnown RBP7.76□□□□□ -1.17
RNF4-221ENST00000513643 TAF9BQ9HBM6 251 aa7.76□□□□□ -1.17
RNF4-221ENST00000513643 ABCB10Q9NRK6 738 aa7.76□□□□□ -1.17
RNF4-221ENST00000513643 TXNL4BQ9NX01 149 aaKnown RBP7.76□□□□□ -1.17
RNF4-221ENST00000513643 STEAP1Q9UHE8 339 aa7.76□□□□□ -1.17
RNF4-221ENST00000513643 TRAPPC2LQ9UL33 140 aa7.76□□□□□ -1.17
RNF4-221ENST00000513643 KCNK7Q9Y2U2 307 aa7.76□□□□□ -1.17
RNF4-221ENST00000513643 DNAH3Q8TD57 4116 aa7.76□□□□□ -1.17
RNF4-221ENST00000513643 TMEM272A0A1B0GTI8 110 aa7.75□□□□□ -1.17
RNF4-221ENST00000513643 RAB27BO00194 218 aa7.75□□□□□ -1.17
RNF4-221ENST00000513643 SDCBPO00560 298 aaPredicted RBP7.75□□□□□ -1.17
RNF4-221ENST00000513643 SLC31A2O15432 143 aa7.75□□□□□ -1.17
RNF4-221ENST00000513643 SPINT2O43291 252 aa7.75□□□□□ -1.17
RNF4-221ENST00000513643 YPEL1O60688 119 aa7.75□□□□□ -1.17
RNF4-221ENST00000513643 OR2F2O95006 317 aa7.75□□□□□ -1.17
RNF4-221ENST00000513643 CD24P25063 80 aa7.75□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms