RNA–Protein interactions for RNA: ENST00000513284.5

RNF4-218, Transcript of ring finger protein 4, humanhuman

TSL 4

Gene RNF4, Length 517 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-218ENST00000513284 ELP2Q6IA86 826 aa8.6□□□□□ -1.03
RNF4-218ENST00000513284 C10orf67Q8IYJ2 551 aa8.6□□□□□ -1.03
RNF4-218ENST00000513284 PARP16Q8N5Y8 322 aa8.6□□□□□ -1.03
RNF4-218ENST00000513284 OR51A4Q8NGJ6 313 aa8.6□□□□□ -1.03
RNF4-218ENST00000513284 OR6Q1Q8NGQ2 317 aa8.6□□□□□ -1.03
RNF4-218ENST00000513284 OR5AK2Q8NH90 309 aa8.6□□□□□ -1.03
RNF4-218ENST00000513284 DDB2Q92466 427 aa8.6□□□□□ -1.03
RNF4-218ENST00000513284 NR1H4Q96RI1 486 aaPredicted RBP8.6□□□□□ -1.03
RNF4-218ENST00000513284 S100A13Q99584 98 aa8.6□□□□□ -1.03
RNF4-218ENST00000513284 FAM192AQ9GZU8 254 aa8.6□□□□□ -1.03
RNF4-218ENST00000513284 PAK1IP1Q9NWT1 392 aaPredicted RBP8.6□□□□□ -1.03
RNF4-218ENST00000513284 EXOGQ9Y2C4 368 aaKnown RBP8.6□□□□□ -1.03
RNF4-218ENST00000513284 ZNF736B4DX44 427 aaPredicted RBP8.59□□□□□ -1.03
RNF4-218ENST00000513284 EI24O14681 340 aa8.59□□□□□ -1.03
RNF4-218ENST00000513284 IGLV1-40P01703 118 aa8.59□□□□□ -1.03
RNF4-218ENST00000513284 CSTBP04080 98 aaKnown RBP8.59□□□□□ -1.03
RNF4-218ENST00000513284 IFNA6P05013 189 aa8.59□□□□□ -1.03
RNF4-218ENST00000513284 ALDH3A2P51648 485 aa8.59□□□□□ -1.03
RNF4-218ENST00000513284 F2RL1P55085 397 aa8.59□□□□□ -1.03
RNF4-218ENST00000513284 ZP1P60852 638 aa8.59□□□□□ -1.03
RNF4-218ENST00000513284 PAX5Q02548 391 aa8.59□□□□□ -1.03
RNF4-218ENST00000513284 GABPB1Q06547 395 aaPredicted RBP8.59□□□□□ -1.03
RNF4-218ENST00000513284 ZFP1Q6P2D0 407 aa8.59□□□□□ -1.03
RNF4-218ENST00000513284 LYPD6Q86Y78 171 aa8.59□□□□□ -1.03
RNF4-218ENST00000513284 RPP25LQ8N5L8 163 aaKnown RBP8.59□□□□□ -1.03
RNF4-218ENST00000513284 OR10AC1Q8NH08 325 aa8.59□□□□□ -1.03
RNF4-218ENST00000513284 IL17DQ8TAD2 202 aa8.59□□□□□ -1.03
RNF4-218ENST00000513284 CNIH3Q8TBE1 160 aa8.59□□□□□ -1.03
RNF4-218ENST00000513284 TNFAIP8L1Q8WVP5 186 aa8.59□□□□□ -1.03
RNF4-218ENST00000513284 ARPC1AQ92747 370 aa8.59□□□□□ -1.03
RNF4-218ENST00000513284 S1PR3Q99500 378 aa8.59□□□□□ -1.03
RNF4-218ENST00000513284 PPIL3Q9H2H8 161 aaKnown RBP8.59□□□□□ -1.03
RNF4-218ENST00000513284 HIPK2Q9H2X6 1198 aa8.59□□□□□ -1.03
RNF4-218ENST00000513284 KIF25Q9UIL4 384 aa8.59□□□□□ -1.03
RNF4-218ENST00000513284 VSIG4Q9Y279 399 aa8.59□□□□□ -1.03
RNF4-218ENST00000513284 GMPPBQ9Y5P6 360 aa8.59□□□□□ -1.03
RNF4-218ENST00000513284 ABCA13Q86UQ4 5058 aa8.58□□□□□ -1.04
RNF4-218ENST00000513284 IGHV1-3A0A0C4DH29 117 aa8.58□□□□□ -1.04
RNF4-218ENST00000513284 A0A1W2PPE3 182 aa8.58□□□□□ -1.04
RNF4-218ENST00000513284 FAM90A10PA6NDY2 464 aa8.58□□□□□ -1.04
RNF4-218ENST00000513284 G3V318 75 aa8.58□□□□□ -1.04
RNF4-218ENST00000513284 RRP9O43818 475 aaKnown RBP8.58□□□□□ -1.04
RNF4-218ENST00000513284 GAPDHP04406 335 aaKnown RBP8.58□□□□□ -1.04
RNF4-218ENST00000513284 GZMHP20718 246 aa8.58□□□□□ -1.04
RNF4-218ENST00000513284 GNG10P50151 68 aa8.58□□□□□ -1.04
RNF4-218ENST00000513284 PPP3R1P63098 170 aa8.58□□□□□ -1.04
RNF4-218ENST00000513284 RAB40BQ12829 278 aa8.58□□□□□ -1.04
RNF4-218ENST00000513284 CDK5R1Q15078 307 aa8.58□□□□□ -1.04
RNF4-218ENST00000513284 ZSCAN26Q16670 478 aa8.58□□□□□ -1.04
RNF4-218ENST00000513284 LTC4SQ16873 150 aa8.58□□□□□ -1.04
RNF4-218ENST00000513284 ZIK1Q3SY52 487 aaPredicted RBP8.58□□□□□ -1.04
RNF4-218ENST00000513284 LINC00322Q6ZN03 302 aaPredicted RBP8.58□□□□□ -1.04
RNF4-218ENST00000513284 LINC00596Q86U02 117 aa8.58□□□□□ -1.04
RNF4-218ENST00000513284 LHFPL3Q86UP9 236 aa8.58□□□□□ -1.04
RNF4-218ENST00000513284 SATL1Q86VE3 508 aa8.58□□□□□ -1.04
RNF4-218ENST00000513284 CBR4Q8N4T8 237 aa8.58□□□□□ -1.04
RNF4-218ENST00000513284 TMEM104Q8NE00 496 aa8.58□□□□□ -1.04
RNF4-218ENST00000513284 OR13A1Q8NGR1 328 aa8.58□□□□□ -1.04
RNF4-218ENST00000513284 MRGPRDQ8TDS7 321 aa8.58□□□□□ -1.04
RNF4-218ENST00000513284 GATAD1Q8WUU5 269 aa8.58□□□□□ -1.04
RNF4-218ENST00000513284 FAM110AQ9BQ89 295 aa8.58□□□□□ -1.04
RNF4-218ENST00000513284 JAM3Q9BX67 310 aa8.58□□□□□ -1.04
RNF4-218ENST00000513284 METTL9Q9H1A3 318 aa8.58□□□□□ -1.04
RNF4-218ENST00000513284 LINC00574Q9H8X3 128 aa8.58□□□□□ -1.04
RNF4-218ENST00000513284 AASSQ9UDR5 926 aa8.58□□□□□ -1.04
RNF4-218ENST00000513284 ZNF580Q9UK33 172 aa8.58□□□□□ -1.04
RNF4-218ENST00000513284 WSB1Q9Y6I7 421 aa8.58□□□□□ -1.04
RNF4-218ENST00000513284 TMEM30CPA0ZSE6 113 aa8.57□□□□□ -1.04
RNF4-218ENST00000513284 NPIPB11E5RHQ5 1161 aa8.57□□□□□ -1.04
RNF4-218ENST00000513284 HSD17B6O14756 317 aa8.57□□□□□ -1.04
RNF4-218ENST00000513284 ZNF780AO75290 641 aaPredicted RBP8.57□□□□□ -1.04
RNF4-218ENST00000513284 OR7C1O76099 320 aaPredicted RBP8.57□□□□□ -1.04
RNF4-218ENST00000513284 HTR3BO95264 441 aa8.57□□□□□ -1.04
RNF4-218ENST00000513284 IGLV1-51P01701 117 aa8.57□□□□□ -1.04
RNF4-218ENST00000513284 GABRB1P18505 474 aa8.57□□□□□ -1.04
RNF4-218ENST00000513284 VDAC1P21796 283 aa8.57□□□□□ -1.04
RNF4-218ENST00000513284 REG1BP48304 166 aa8.57□□□□□ -1.04
RNF4-218ENST00000513284 RAB9AP51151 201 aa8.57□□□□□ -1.04
RNF4-218ENST00000513284 ZNF816Q0VGE8 651 aaPredicted RBP8.57□□□□□ -1.04
RNF4-218ENST00000513284 TMEM30BQ3MIR4 351 aa8.57□□□□□ -1.04
RNF4-218ENST00000513284 RSBN1Q5VWQ0 802 aaPredicted RBP8.57□□□□□ -1.04
RNF4-218ENST00000513284 LPCAT4Q643R3 524 aa8.57□□□□□ -1.04
RNF4-218ENST00000513284 MOB3BQ86TA1 216 aa8.57□□□□□ -1.04
RNF4-218ENST00000513284 IZUMO1Q8IYV9 350 aa8.57□□□□□ -1.04
RNF4-218ENST00000513284 STX19Q8N4C7 294 aa8.57□□□□□ -1.04
RNF4-218ENST00000513284 OR2T10Q8NGZ9 312 aa8.57□□□□□ -1.04
RNF4-218ENST00000513284 GPR148Q8TDV2 347 aa8.57□□□□□ -1.04
RNF4-218ENST00000513284 NEK7Q8TDX7 302 aa8.57□□□□□ -1.04
RNF4-218ENST00000513284 LGALS12Q96DT0 336 aa8.57□□□□□ -1.04
RNF4-218ENST00000513284 SLC29A1Q99808 456 aa8.57□□□□□ -1.04
RNF4-218ENST00000513284 CHCHD3Q9NX63 227 aaKnown RBP8.57□□□□□ -1.04
RNF4-218ENST00000513284 RPL36Q9Y3U8 105 aaKnown RBP8.57□□□□□ -1.04
RNF4-218ENST00000513284 IGHV4OR15-8A0A075B7B6 117 aa8.56□□□□□ -1.04
RNF4-218ENST00000513284 A0A087WW49 117 aa8.56□□□□□ -1.04
RNF4-218ENST00000513284 TRAV24A0A0B4J272 114 aa8.56□□□□□ -1.04
RNF4-218ENST00000513284 IRGMA1A4Y4 181 aa8.56□□□□□ -1.04
RNF4-218ENST00000513284 GABRPO00591 440 aa8.56□□□□□ -1.04
RNF4-218ENST00000513284 HSPA12AO43301 675 aa8.56□□□□□ -1.04
RNF4-218ENST00000513284 TXNL1O43396 289 aa8.56□□□□□ -1.04
RNF4-218ENST00000513284 SLC25A17O43808 307 aa8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms