RNA–Protein interactions for RNA: ENST00000512813.5

CLCN3-208, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 4

Gene CLCN3, Length 563 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-208ENST00000512813 RRHO14718 337 aa6.73□□□□□ -1.33
CLCN3-208ENST00000512813 ST8SIA5O15466 376 aa6.73□□□□□ -1.33
CLCN3-208ENST00000512813 LANCL1O43813 399 aa6.73□□□□□ -1.33
CLCN3-208ENST00000512813 H1F0P07305 194 aaKnown RBP6.73□□□□□ -1.33
CLCN3-208ENST00000512813 CLUP10909 449 aa6.73□□□□□ -1.33
CLCN3-208ENST00000512813 BTF3P20290 206 aaKnown RBP6.73□□□□□ -1.33
CLCN3-208ENST00000512813 CBLN1P23435 193 aa6.73□□□□□ -1.33
CLCN3-208ENST00000512813 KDELR2P33947 212 aa6.73□□□□□ -1.33
CLCN3-208ENST00000512813 FAM3BP58499 235 aaPredicted RBP6.73□□□□□ -1.33
CLCN3-208ENST00000512813 ODF3L2Q3SX64 289 aa6.73□□□□□ -1.33
CLCN3-208ENST00000512813 Q6P435 159 aa6.73□□□□□ -1.33
CLCN3-208ENST00000512813 VTCN1Q7Z7D3 282 aa6.73□□□□□ -1.33
CLCN3-208ENST00000512813 ZDHHC13Q8IUH4 622 aa6.73□□□□□ -1.33
CLCN3-208ENST00000512813 SLC38A6Q8IZM9 456 aa6.73□□□□□ -1.33
CLCN3-208ENST00000512813 OR2C3Q8N628 320 aa6.73□□□□□ -1.33
CLCN3-208ENST00000512813 OTOSQ8NHW6 89 aa6.73□□□□□ -1.33
CLCN3-208ENST00000512813 USMG5Q96IX5 58 aa6.73□□□□□ -1.33
CLCN3-208ENST00000512813 CHRDL1Q9BU40 450 aa6.73□□□□□ -1.33
CLCN3-208ENST00000512813 PBOV1Q9GZY1 135 aa6.73□□□□□ -1.33
CLCN3-208ENST00000512813 TLDC2A0PJX2 215 aa6.72□□□□□ -1.33
CLCN3-208ENST00000512813 SLC31A2O15432 143 aa6.72□□□□□ -1.33
CLCN3-208ENST00000512813 S1PR2O95136 353 aa6.72□□□□□ -1.33
CLCN3-208ENST00000512813 CYB5AP00167 134 aa6.72□□□□□ -1.33
CLCN3-208ENST00000512813 PAX5Q02548 391 aa6.72□□□□□ -1.33
CLCN3-208ENST00000512813 CRMP1Q14194 572 aa6.72□□□□□ -1.33
CLCN3-208ENST00000512813 ERICH5Q6P6B1 374 aa6.72□□□□□ -1.33
CLCN3-208ENST00000512813 CYP4Z1Q86W10 505 aa6.72□□□□□ -1.33
CLCN3-208ENST00000512813 ZNF439Q8NDP4 499 aa6.72□□□□□ -1.33
CLCN3-208ENST00000512813 THEM6Q8WUY1 208 aa6.72□□□□□ -1.33
CLCN3-208ENST00000512813 UBLCP1Q8WVY7 318 aaPredicted RBP6.72□□□□□ -1.33
CLCN3-208ENST00000512813 THRSPQ92748 146 aa6.72□□□□□ -1.33
CLCN3-208ENST00000512813 GFOD1Q9NXC2 390 aa6.72□□□□□ -1.33
CLCN3-208ENST00000512813 NUFIP1Q9UHK0 495 aaKnown RBP6.72□□□□□ -1.33
CLCN3-208ENST00000512813 LGALS13Q9UHV8 139 aa6.72□□□□□ -1.33
CLCN3-208ENST00000512813 RPL36Q9Y3U8 105 aaKnown RBP6.72□□□□□ -1.33
CLCN3-208ENST00000512813 IGHV4-28A0A0C4DH34 117 aa6.71□□□□□ -1.34
CLCN3-208ENST00000512813 TRBV4-1A0A0J9YWV2 114 aa6.71□□□□□ -1.34
CLCN3-208ENST00000512813 TMEM269A0A1B0GVZ9 245 aa6.71□□□□□ -1.34
CLCN3-208ENST00000512813 A6NIN4 97 aa6.71□□□□□ -1.34
CLCN3-208ENST00000512813 SDCBPO00560 298 aaPredicted RBP6.71□□□□□ -1.34
CLCN3-208ENST00000512813 SNNO75324 88 aaPredicted RBP6.71□□□□□ -1.34
CLCN3-208ENST00000512813 HTR3BO95264 441 aa6.71□□□□□ -1.34
CLCN3-208ENST00000512813 GSTT1P30711 240 aa6.71□□□□□ -1.34
CLCN3-208ENST00000512813 MAP2K4P45985 399 aa6.71□□□□□ -1.34
CLCN3-208ENST00000512813 FUT6P51993 359 aa6.71□□□□□ -1.34
CLCN3-208ENST00000512813 SCN1BQ07699 218 aa6.71□□□□□ -1.34
CLCN3-208ENST00000512813 PLGLAQ15195 96 aa6.71□□□□□ -1.34
CLCN3-208ENST00000512813 AGKQ53H12 422 aa6.71□□□□□ -1.34
CLCN3-208ENST00000512813 ZNF562Q6V9R5 426 aa6.71□□□□□ -1.34
CLCN3-208ENST00000512813 Q6ZSR3 168 aa6.71□□□□□ -1.34
CLCN3-208ENST00000512813 OR5T1Q8NG75 326 aa6.71□□□□□ -1.34
CLCN3-208ENST00000512813 OR14K1Q8NGZ2 314 aa6.71□□□□□ -1.34
CLCN3-208ENST00000512813 KCNG3Q8TAE7 436 aa6.71□□□□□ -1.34
CLCN3-208ENST00000512813 SPAG8Q99932 426 aaPredicted RBP6.71□□□□□ -1.34
CLCN3-208ENST00000512813 FUZQ9BT04 418 aa6.71□□□□□ -1.34
CLCN3-208ENST00000512813 C6orf62Q9GZU0 229 aaPredicted RBP6.71□□□□□ -1.34
CLCN3-208ENST00000512813 ENPP4Q9Y6X5 453 aa6.71□□□□□ -1.34
CLCN3-208ENST00000512813 PKHD1L1Q86WI1 4243 aa6.7□□□□□ -1.34
CLCN3-208ENST00000512813 TMEM213A2RRL7 107 aa6.7□□□□□ -1.34
CLCN3-208ENST00000512813 A8MWP6 167 aa6.7□□□□□ -1.34
CLCN3-208ENST00000512813 E2F6O75461 281 aa6.7□□□□□ -1.34
CLCN3-208ENST00000512813 RBMXL2O75526 392 aaKnown RBP6.7□□□□□ -1.34
CLCN3-208ENST00000512813 TTRP02766 147 aa6.7□□□□□ -1.34
CLCN3-208ENST00000512813 CASQ1P31415 396 aa6.7□□□□□ -1.34
CLCN3-208ENST00000512813 UBE2V2Q15819 145 aa6.7□□□□□ -1.34
CLCN3-208ENST00000512813 C12orf74Q32Q52 190 aa6.7□□□□□ -1.34
CLCN3-208ENST00000512813 TMEM30BQ3MIR4 351 aa6.7□□□□□ -1.34
CLCN3-208ENST00000512813 IFI44LQ53G44 452 aa6.7□□□□□ -1.34
CLCN3-208ENST00000512813 RSBN1Q5VWQ0 802 aaPredicted RBP6.7□□□□□ -1.34
CLCN3-208ENST00000512813 BTNL8Q6UX41 500 aa6.7□□□□□ -1.34
CLCN3-208ENST00000512813 ASCL4Q6XD76 172 aa6.7□□□□□ -1.34
CLCN3-208ENST00000512813 RBPMS2Q6ZRY4 209 aaKnown RBP6.7□□□□□ -1.34
CLCN3-208ENST00000512813 RP9Q8TA86 221 aaKnown RBP6.7□□□□□ -1.34
CLCN3-208ENST00000512813 CD300LFQ8TDQ1 290 aa6.7□□□□□ -1.34
CLCN3-208ENST00000512813 DEFB104AQ8WTQ1 72 aa6.7□□□□□ -1.34
CLCN3-208ENST00000512813 ASB9Q96DX5 294 aa6.7□□□□□ -1.34
CLCN3-208ENST00000512813 BORCS8Q96FH0 119 aa6.7□□□□□ -1.34
CLCN3-208ENST00000512813 NICN1Q9BSH3 213 aa6.7□□□□□ -1.34
CLCN3-208ENST00000512813 MRPL20Q9BYC9 149 aaKnown RBP6.7□□□□□ -1.34
CLCN3-208ENST00000512813 FAT4Q6V0I7 4981 aa6.69□□□□□ -1.34
CLCN3-208ENST00000512813 ELOA3CA0A087WX78 387 aaPredicted RBP6.69□□□□□ -1.34
CLCN3-208ENST00000512813 IGHV3-43A0A0B4J1X8 118 aa6.69□□□□□ -1.34
CLCN3-208ENST00000512813 TRAV39A0A0B4J263 110 aa6.69□□□□□ -1.34
CLCN3-208ENST00000512813 A0A1B0GTI1 187 aa6.69□□□□□ -1.34
CLCN3-208ENST00000512813 C15orf65H3BRN8 121 aa6.69□□□□□ -1.34
CLCN3-208ENST00000512813 HSPB6O14558 160 aa6.69□□□□□ -1.34
CLCN3-208ENST00000512813 CA2P00918 260 aa6.69□□□□□ -1.34
CLCN3-208ENST00000512813 OXTP01178 125 aa6.69□□□□□ -1.34
CLCN3-208ENST00000512813 IGHV3-43DP0DP04 118 aa6.69□□□□□ -1.34
CLCN3-208ENST00000512813 OR3A3P47888 321 aa6.69□□□□□ -1.34
CLCN3-208ENST00000512813 GSSP48637 474 aa6.69□□□□□ -1.34
CLCN3-208ENST00000512813 ZNF134P52741 427 aa6.69□□□□□ -1.34
CLCN3-208ENST00000512813 ATP1B3P54709 279 aa6.69□□□□□ -1.34
CLCN3-208ENST00000512813 EXOSC2Q13868 293 aaKnown RBP6.69□□□□□ -1.34
CLCN3-208ENST00000512813 TMEM187Q14656 261 aa6.69□□□□□ -1.34
CLCN3-208ENST00000512813 ICAM4Q14773 271 aa6.69□□□□□ -1.34
CLCN3-208ENST00000512813 LCE2AQ5TA79 106 aaPredicted RBP6.69□□□□□ -1.34
CLCN3-208ENST00000512813 IFT20Q8IY31 132 aa6.69□□□□□ -1.34
CLCN3-208ENST00000512813 UXS1Q8NBZ7 420 aa6.69□□□□□ -1.34
CLCN3-208ENST00000512813 OR5B3Q8NH48 314 aa6.69□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms